Gene annotation
Transcriptome id Sobic.001G375800.1
Synonym Sb01g035690
Functional annotation expressed protein
UniProt C5X0N5
Pfam -
Panther DB PTHR33306 PTHR33306:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G06890 : -
RAP-DB (Rice) LOC_Os03g22360.1 : expressed protein
MaizeGDB (Corn) Zm00025a002399 , Zm00025a052401 , Zm00025a023422
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G375800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G036200 protein of unknown function containing protein, expressed -
2 Sobic.001G456400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@protein of unknown function DUF1675 domain containing protein, expressed -
3 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -
4 Sobic.002G420400 - -
5 Sobic.010G033500 expressed protein -
6 Sobic.004G242200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nucleobase-ascorbate transporter, putative, expressed -
7 Sobic.003G379900 plus-3 domain containing protein, putative, expressed -
8 Sobic.001G485200 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
9 Sobic.004G339900 expressed protein -
10 Sobic.003G400400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine proteinase inhibitor precursor protein, putative, expressed -
11 Sobic.006G107900 uncharacterized Cys-rich domain containing protein, putative, expressed -
12 Sobic.009G233000 homeobox domain containing protein, expressed -
13 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.009G250500 expressed protein -
15 Sobic.010G054800 LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.003G215600 pleiotropic drug resistance protein, putative, expressed -
17 Sobic.010G152000 powdery mildew resistant protein 5, putative, expressed -
18 Sobic.007G162700 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
19 Sobic.006G143600 similar to OSIGBa0157K09-H0214G12.13 protein(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase
20 Sobic.002G391100 Thioredoxin peroxidase (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed K11188: peroxiredoxin 6


Gene co-expression network
sample Sobic001G375800 Sobic001G375800 Sobic005G036200 Sobic005G036200 Sobic001G375800--Sobic005G036200 Sobic001G456400 Sobic001G456400 Sobic001G375800--Sobic001G456400 Sobic009G002200 Sobic009G002200 Sobic001G375800--Sobic009G002200 Sobic002G420400 Sobic002G420400 Sobic001G375800--Sobic002G420400 Sobic010G033500 Sobic010G033500 Sobic001G375800--Sobic010G033500 Sobic004G242200 Sobic004G242200 Sobic001G375800--Sobic004G242200 Sobic003G379900 Sobic003G379900 Sobic001G375800--Sobic003G379900 Sobic001G485200 Sobic001G485200 Sobic001G375800--Sobic001G485200 Sobic004G339900 Sobic004G339900 Sobic001G375800--Sobic004G339900 Sobic007G192200 Sobic007G192200 Sobic005G036200--Sobic007G192200 Sobic005G036200--Sobic002G420400 Sobic005G036200--Sobic009G002200 Sobic005G036200--Sobic001G375800 Sobic010G054800 Sobic010G054800 Sobic005G036200--Sobic010G054800 Sobic005G036200--Sobic001G456400 Sobic009G250500 Sobic009G250500 Sobic005G036200--Sobic009G250500 Sobic005G036200--Sobic004G242200 Sobic010G131500 Sobic010G131500 Sobic005G036200--Sobic010G131500 Sobic001G456400--Sobic004G242200 Sobic001G456400--Sobic005G036200 Sobic001G456400--Sobic001G375800 Sobic001G456400--Sobic009G002200 Sobic001G456400--Sobic002G420400 Sobic010G152000 Sobic010G152000 Sobic001G456400--Sobic010G152000 Sobic003G084200 Sobic003G084200 Sobic001G456400--Sobic003G084200 Sobic009G233000 Sobic009G233000 Sobic001G456400--Sobic009G233000 Sobic001G456400--Sobic003G379900 Sobic007G050800 Sobic007G050800 Sobic009G002200--Sobic007G050800 Sobic003G290400 Sobic003G290400 Sobic009G002200--Sobic003G290400 Sobic004G282601 Sobic004G282601 Sobic009G002200--Sobic004G282601 Sobic006G135800 Sobic006G135800 Sobic009G002200--Sobic006G135800 Sobic009G002200--Sobic005G036200 Sobic005G153000 Sobic005G153000 Sobic009G002200--Sobic005G153000 Sobic009G002200--Sobic001G375800 Sobic004G078500 Sobic004G078500 Sobic009G002200--Sobic004G078500 Sobic010G037901 Sobic010G037901 Sobic009G002200--Sobic010G037901 Sobic002G420400--Sobic004G339900 Sobic004G071050 Sobic004G071050 Sobic002G420400--Sobic004G071050 Sobic002G420400--Sobic005G036200 Sobic002G420400--Sobic004G242200 Sobic002G420400--Sobic001G485200 Sobic002G420400--Sobic003G379900 Sobic002G420400--Sobic001G375800 Sobic002G420400--Sobic010G152000 Sobic001G194100 Sobic001G194100 Sobic002G420400--Sobic001G194100 Sobic010G033500--Sobic001G375800 Sobic010G195450 Sobic010G195450 Sobic010G033500--Sobic010G195450 Sobic010G033500--Sobic010G054800 Sobic003G239500 Sobic003G239500 Sobic010G033500--Sobic003G239500 Sobic006G047700 Sobic006G047700 Sobic010G033500--Sobic006G047700 Sobic010G033500--Sobic004G339900 Sobic010G033500--Sobic009G002200 Sobic010G033500--Sobic005G036200 Sobic004G254500 Sobic004G254500 Sobic010G033500--Sobic004G254500 Sobic004G242200--Sobic002G420400 Sobic004G242200--Sobic001G456400 Sobic004G242200--Sobic005G036200 Sobic004G242200--Sobic009G002200 Sobic004G242200--Sobic001G375800 Sobic004G242200--Sobic007G192200 Sobic004G242200--Sobic004G339900 Sobic004G242200--Sobic010G152000 Sobic004G242200--Sobic004G071050 Sobic002G238800 Sobic002G238800 Sobic003G379900--Sobic002G238800 Sobic003G379900--Sobic002G420400 Sobic005G034200 Sobic005G034200 Sobic003G379900--Sobic005G034200 Sobic010G087100 Sobic010G087100 Sobic003G379900--Sobic010G087100 Sobic003G042200 Sobic003G042200 Sobic003G379900--Sobic003G042200 Sobic003G379900--Sobic004G339900 Sobic001G081800 Sobic001G081800 Sobic003G379900--Sobic001G081800 Sobic006G184200 Sobic006G184200 Sobic003G379900--Sobic006G184200 Sobic003G379900--Sobic005G036200 Sobic006G107900 Sobic006G107900 Sobic001G485200--Sobic006G107900 Sobic003G400400 Sobic003G400400 Sobic001G485200--Sobic003G400400 Sobic001G485200--Sobic004G071050 Sobic002G391100 Sobic002G391100 Sobic001G485200--Sobic002G391100 Sobic001G017500 Sobic001G017500 Sobic001G485200--Sobic001G017500 Sobic001G485200--Sobic004G339900 Sobic010G106601 Sobic010G106601 Sobic001G485200--Sobic010G106601 Sobic001G485200--Sobic002G420400 Sobic002G302300 Sobic002G302300 Sobic001G485200--Sobic002G302300 Sobic004G339900--Sobic002G420400 Sobic004G339900--Sobic004G071050 Sobic004G339900--Sobic001G485200 Sobic004G339900--Sobic001G194100 Sobic004G339900--Sobic010G152000 Sobic007G041200 Sobic007G041200 Sobic004G339900--Sobic007G041200 Sobic008G116100 Sobic008G116100 Sobic004G339900--Sobic008G116100 Sobic004G065800 Sobic004G065800 Sobic004G339900--Sobic004G065800 Sobic004G163700 Sobic004G163700 Sobic004G339900--Sobic004G163700
Octagon: transcription factors


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