Gene annotation
Transcriptome id Sobic.001G456400.3,Sobic.001G456400.2,Sobic.001G456400.1
Synonym AFP3, Sb01g042880
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
protein of unknown function DUF1675 domain containing protein, expressed
UniProt A0A1Z5SAQ1 , A0A1Z5SAQ3 , C5WSS9
Pfam PF16136 PF16135 PF07897 PF16136 PF16135
Panther DB PTHR31413 PTHR31413:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007165; signal transduction


Orthologs (automatic annotation)
TAIR AT3G29575 : ABI five binding protein 3
RAP-DB (Rice) LOC_Os03g11550.1,LOC_Os03g11550.2 : protein of unknown function DUF1675 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a053068
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G456400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G242200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nucleobase-ascorbate transporter, putative, expressed -
2 Sobic.005G036200 protein of unknown function containing protein, expressed -
3 Sobic.001G375800 expressed protein -
4 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -
5 Sobic.002G420400 - -
6 Sobic.010G152000 powdery mildew resistant protein 5, putative, expressed -
7 Sobic.003G084200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.009G233000 homeobox domain containing protein, expressed -
9 Sobic.003G379900 plus-3 domain containing protein, putative, expressed -
10 Sobic.003G215600 pleiotropic drug resistance protein, putative, expressed -
11 Sobic.006G217500 B3 DNA binding domain containing protein, expressed -
12 Sobic.007G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.010G190800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1680 domain containing protein, putative, expressed K09955: uncharacterized protein
15 Sobic.006G107900 uncharacterized Cys-rich domain containing protein, putative, expressed -
16 Sobic.004G339900 expressed protein -
17 Sobic.003G400400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine proteinase inhibitor precursor protein, putative, expressed -
18 Sobic.007G050800 abhydrolase domain-containing protein FAM108C1, putative, expressed -
19 Sobic.003G140800 expressed protein -
20 Sobic.005G165800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@SEY1, putative, expressed -


Gene co-expression network
sample Sobic001G456400 Sobic001G456400 Sobic004G242200 Sobic004G242200 Sobic001G456400--Sobic004G242200 Sobic005G036200 Sobic005G036200 Sobic001G456400--Sobic005G036200 Sobic001G375800 Sobic001G375800 Sobic001G456400--Sobic001G375800 Sobic009G002200 Sobic009G002200 Sobic001G456400--Sobic009G002200 Sobic002G420400 Sobic002G420400 Sobic001G456400--Sobic002G420400 Sobic010G152000 Sobic010G152000 Sobic001G456400--Sobic010G152000 Sobic003G084200 Sobic003G084200 Sobic001G456400--Sobic003G084200 Sobic009G233000 Sobic009G233000 Sobic001G456400--Sobic009G233000 Sobic003G379900 Sobic003G379900 Sobic001G456400--Sobic003G379900 Sobic004G242200--Sobic002G420400 Sobic004G242200--Sobic001G456400 Sobic004G242200--Sobic005G036200 Sobic004G242200--Sobic009G002200 Sobic004G242200--Sobic001G375800 Sobic007G192200 Sobic007G192200 Sobic004G242200--Sobic007G192200 Sobic004G339900 Sobic004G339900 Sobic004G242200--Sobic004G339900 Sobic004G242200--Sobic010G152000 Sobic004G071050 Sobic004G071050 Sobic004G242200--Sobic004G071050 Sobic005G036200--Sobic007G192200 Sobic005G036200--Sobic002G420400 Sobic005G036200--Sobic009G002200 Sobic005G036200--Sobic001G375800 Sobic010G054800 Sobic010G054800 Sobic005G036200--Sobic010G054800 Sobic005G036200--Sobic001G456400 Sobic009G250500 Sobic009G250500 Sobic005G036200--Sobic009G250500 Sobic005G036200--Sobic004G242200 Sobic010G131500 Sobic010G131500 Sobic005G036200--Sobic010G131500 Sobic001G375800--Sobic005G036200 Sobic001G375800--Sobic001G456400 Sobic001G375800--Sobic009G002200 Sobic001G375800--Sobic002G420400 Sobic010G033500 Sobic010G033500 Sobic001G375800--Sobic010G033500 Sobic001G375800--Sobic004G242200 Sobic001G375800--Sobic003G379900 Sobic001G485200 Sobic001G485200 Sobic001G375800--Sobic001G485200 Sobic001G375800--Sobic004G339900 Sobic007G050800 Sobic007G050800 Sobic009G002200--Sobic007G050800 Sobic003G290400 Sobic003G290400 Sobic009G002200--Sobic003G290400 Sobic004G282601 Sobic004G282601 Sobic009G002200--Sobic004G282601 Sobic006G135800 Sobic006G135800 Sobic009G002200--Sobic006G135800 Sobic009G002200--Sobic005G036200 Sobic005G153000 Sobic005G153000 Sobic009G002200--Sobic005G153000 Sobic009G002200--Sobic001G375800 Sobic004G078500 Sobic004G078500 Sobic009G002200--Sobic004G078500 Sobic010G037901 Sobic010G037901 Sobic009G002200--Sobic010G037901 Sobic002G420400--Sobic004G339900 Sobic002G420400--Sobic004G071050 Sobic002G420400--Sobic005G036200 Sobic002G420400--Sobic004G242200 Sobic002G420400--Sobic001G485200 Sobic002G420400--Sobic003G379900 Sobic002G420400--Sobic001G375800 Sobic002G420400--Sobic010G152000 Sobic001G194100 Sobic001G194100 Sobic002G420400--Sobic001G194100 Sobic010G152000--Sobic004G339900 Sobic010G152000--Sobic002G420400 Sobic010G152000--Sobic004G071050 Sobic010G152000--Sobic005G036200 Sobic010G152000--Sobic001G456400 Sobic010G152000--Sobic004G242200 Sobic010G152000--Sobic001G485200 Sobic003G071901 Sobic003G071901 Sobic010G152000--Sobic003G071901 Sobic004G065800 Sobic004G065800 Sobic010G152000--Sobic004G065800 Sobic001G104500 Sobic001G104500 Sobic003G084200--Sobic001G104500 Sobic003G084200--Sobic007G050800 Sobic006G275500 Sobic006G275500 Sobic003G084200--Sobic006G275500 Sobic005G157300 Sobic005G157300 Sobic003G084200--Sobic005G157300 Sobic002G168000 Sobic002G168000 Sobic003G084200--Sobic002G168000 Sobic007G187700 Sobic007G187700 Sobic003G084200--Sobic007G187700 Sobic003G244000 Sobic003G244000 Sobic003G084200--Sobic003G244000 Sobic003G084200--Sobic009G002200 Sobic003G084200--Sobic001G456400 Sobic003G295600 Sobic003G295600 Sobic009G233000--Sobic003G295600 Sobic004G301800 Sobic004G301800 Sobic009G233000--Sobic004G301800 Sobic003G283700 Sobic003G283700 Sobic009G233000--Sobic003G283700 Sobic003G236200 Sobic003G236200 Sobic009G233000--Sobic003G236200 Sobic002G391100 Sobic002G391100 Sobic009G233000--Sobic002G391100 Sobic003G098800 Sobic003G098800 Sobic009G233000--Sobic003G098800 Sobic010G142900 Sobic010G142900 Sobic009G233000--Sobic010G142900 Sobic001G380800 Sobic001G380800 Sobic009G233000--Sobic001G380800 Sobic002G118300 Sobic002G118300 Sobic009G233000--Sobic002G118300 Sobic002G238800 Sobic002G238800 Sobic003G379900--Sobic002G238800 Sobic003G379900--Sobic002G420400 Sobic005G034200 Sobic005G034200 Sobic003G379900--Sobic005G034200 Sobic010G087100 Sobic010G087100 Sobic003G379900--Sobic010G087100 Sobic003G042200 Sobic003G042200 Sobic003G379900--Sobic003G042200 Sobic003G379900--Sobic004G339900 Sobic001G081800 Sobic001G081800 Sobic003G379900--Sobic001G081800 Sobic006G184200 Sobic006G184200 Sobic003G379900--Sobic006G184200 Sobic003G379900--Sobic005G036200
Octagon: transcription factors


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