Gene annotation
Transcriptome id Sobic.010G195400.1
Synonym
Functional annotation dihydroflavonol-4-reductase, putative, expressed
UniProt A0A194YLB2
Pfam -
Panther DB PTHR10366 PTHR10366:SF392
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33590 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os06g41800.1 : dihydroflavonol-4-reductase, putative, expressed
MaizeGDB (Corn) Zm00025a042110 , Zm00025a045929
Brachypodium KQJ98430
Barley HORVU0Hr1G013070.6 , HORVU0Hr1G013070.5 , HORVU0Hr1G013070.4 , HORVU0Hr1G013070.3 , HORVU0Hr1G013070.2 , HORVU0Hr1G013070.1 , HORVU5Hr1G065330.8 , HORVU5Hr1G065330.9 , HORVU5Hr1G065330.1 , HORVU5Hr1G065330.2 , HORVU5Hr1G065330.3 , HORVU5Hr1G065330.4 , HORVU5Hr1G065330.5 , HORVU5Hr1G065330.6 , HORVU5Hr1G065330.7 , HORVU5Hr1G065330.12 , HORVU5Hr1G065330.13 , HORVU5Hr1G065330.10 , HORVU5Hr1G065330.11 , HORVU7Hr1G093430.1 , HORVU7Hr1G093430.2 , HORVU7Hr1G093480.1 , HORVU7Hr1G093480.2
Wheat TraesCS7D02G391800 , TraesCS7D02G392400 , TraesCS7D02G392200 , TraesCS7A02G396600 , TraesCS5B02G223700 , TraesCS5B02G223700 , TraesCS7B02G298900 , TraesCS7B02G298700 , TraesCS7D02G392100 , TraesCS7A02G398000 , TraesCS5D02G232400 , TraesCS5A02G225100 , TraesCS5A02G225100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G100000 Os1bglu1 - beta-mannosidase/glucosidase homologue, expressed K05350: beta-glucosidase
2 Sobic.005G054900 acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
3 Sobic.001G164800 B3 DNA binding domain containing protein, expressed -
4 Sobic.005G073700 OsFBX408 - F-box domain containing protein, expressed -
5 Sobic.001G254700 TPD1, putative, expressed -
6 Sobic.010G054800 LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.006G047700 "Gene located in Ma1, a phosphatidylethanolamine-binding (PEBP) protein domain, "(PubMedID : 27335143)@osFTL13 FT-Like13 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
8 Sobic.009G250500 expressed protein -
9 Sobic.007G008500 basic helix-loop-helix family protein, putative, expressed -
10 Sobic.003G398200 B3 DNA binding domain containing protein, expressed -
11 Sobic.004G254500 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
12 Sobic.007G050900 - -
13 Sobic.007G197500 expressed protein -
14 Sobic.001G498900 expressed protein -
15 Sobic.006G155300 aquaporin protein, putative, expressed K09873: aquaporin TIP
16 Sobic.001G058800 cysteine proteinase EP-B 1 precursor, putative, expressed -
17 Sobic.002G244800 - -
18 Sobic.004G200700 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
19 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -
20 Sobic.008G079650 - -


Gene co-expression network
sample Sobic010G195400 Sobic010G195400 Sobic003G100000 Sobic003G100000 Sobic010G195400--Sobic003G100000 Sobic005G054900 Sobic005G054900 Sobic010G195400--Sobic005G054900 Sobic001G164800 Sobic001G164800 Sobic010G195400--Sobic001G164800 Sobic005G073700 Sobic005G073700 Sobic010G195400--Sobic005G073700 Sobic001G254700 Sobic001G254700 Sobic010G195400--Sobic001G254700 Sobic010G054800 Sobic010G054800 Sobic010G195400--Sobic010G054800 Sobic006G047700 Sobic006G047700 Sobic010G195400--Sobic006G047700 Sobic009G250500 Sobic009G250500 Sobic010G195400--Sobic009G250500 Sobic007G008500 Sobic007G008500 Sobic010G195400--Sobic007G008500 Sobic003G100000--Sobic001G254700 Sobic003G100000--Sobic009G250500 Sobic003G100000--Sobic005G073700 Sobic003G398200 Sobic003G398200 Sobic003G100000--Sobic003G398200 Sobic003G100000--Sobic010G054800 Sobic010G131500 Sobic010G131500 Sobic003G100000--Sobic010G131500 Sobic007G025600 Sobic007G025600 Sobic003G100000--Sobic007G025600 Sobic001G254800 Sobic001G254800 Sobic003G100000--Sobic001G254800 Sobic007G050900 Sobic007G050900 Sobic003G100000--Sobic007G050900 Sobic005G054900--Sobic001G164800 Sobic002G046000 Sobic002G046000 Sobic005G054900--Sobic002G046000 Sobic005G054900--Sobic007G008500 Sobic001G166900 Sobic001G166900 Sobic005G054900--Sobic001G166900 Sobic010G110100 Sobic010G110100 Sobic005G054900--Sobic010G110100 Sobic005G054900--Sobic003G398200 Sobic002G184700 Sobic002G184700 Sobic005G054900--Sobic002G184700 Sobic009G103800 Sobic009G103800 Sobic005G054900--Sobic009G103800 Sobic004G349550 Sobic004G349550 Sobic005G054900--Sobic004G349550 Sobic001G164800--Sobic005G054900 Sobic001G164800--Sobic007G008500 Sobic001G164800--Sobic002G046000 Sobic001G164800--Sobic004G349550 Sobic001G164800--Sobic001G166900 Sobic002G327600 Sobic002G327600 Sobic001G164800--Sobic002G327600 Sobic006G248000 Sobic006G248000 Sobic001G164800--Sobic006G248000 Sobic003G443400 Sobic003G443400 Sobic001G164800--Sobic003G443400 Sobic010G256100 Sobic010G256100 Sobic001G164800--Sobic010G256100 Sobic005G073700--Sobic001G254700 Sobic005G073700--Sobic003G100000 Sobic005G073700--Sobic010G054800 Sobic005G073700--Sobic006G047700 Sobic005G073700--Sobic007G050900 Sobic002G244800 Sobic002G244800 Sobic005G073700--Sobic002G244800 Sobic004G200700 Sobic004G200700 Sobic005G073700--Sobic004G200700 Sobic005G073700--Sobic009G250500 Sobic004G254500 Sobic004G254500 Sobic005G073700--Sobic004G254500 Sobic001G254700--Sobic003G100000 Sobic001G254700--Sobic009G250500 Sobic001G254700--Sobic005G073700 Sobic001G254700--Sobic003G398200 Sobic001G254700--Sobic007G025600 Sobic001G254700--Sobic001G254800 Sobic001G254700--Sobic009G103800 Sobic001G254700--Sobic010G131500 Sobic001G254700--Sobic002G184700 Sobic010G054800--Sobic006G047700 Sobic010G054800--Sobic005G073700 Sobic010G054800--Sobic007G050900 Sobic010G195450 Sobic010G195450 Sobic010G054800--Sobic010G195450 Sobic010G054800--Sobic003G100000 Sobic010G054800--Sobic004G254500 Sobic010G054800--Sobic001G254700 Sobic010G054800--Sobic002G244800 Sobic010G054800--Sobic009G250500 Sobic002G197800 Sobic002G197800 Sobic006G047700--Sobic002G197800 Sobic006G047700--Sobic004G254500 Sobic006G047700--Sobic010G054800 Sobic006G047700--Sobic010G195450 Sobic006G047700--Sobic005G073700 Sobic006G047700--Sobic007G050900 Sobic006G047700--Sobic002G244800 Sobic006G047700--Sobic003G100000 Sobic006G047700--Sobic001G254700 Sobic009G250500--Sobic010G131500 Sobic009G250500--Sobic003G398200 Sobic003G437400 Sobic003G437400 Sobic009G250500--Sobic003G437400 Sobic001G058800 Sobic001G058800 Sobic009G250500--Sobic001G058800 Sobic003G098800 Sobic003G098800 Sobic009G250500--Sobic003G098800 Sobic003G051400 Sobic003G051400 Sobic009G250500--Sobic003G051400 Sobic006G143600 Sobic006G143600 Sobic009G250500--Sobic006G143600 Sobic006G248100 Sobic006G248100 Sobic009G250500--Sobic006G248100 Sobic009G250500--Sobic003G100000 Sobic007G008500--Sobic001G166900 Sobic007G008500--Sobic006G248000 Sobic007G008500--Sobic004G349550 Sobic007G008500--Sobic002G046000 Sobic010G198900 Sobic010G198900 Sobic007G008500--Sobic010G198900 Sobic006G167700 Sobic006G167700 Sobic007G008500--Sobic006G167700 Sobic007G008500--Sobic009G103800 Sobic007G008500--Sobic002G184700 Sobic007G008500--Sobic007G025600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.