Gene annotation
Transcriptome id Sobic.001G463600.1
Synonym
Functional annotation -
UniProt A0A1B6QPR5
Pfam -
Panther DB PTHR37249
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01075 : Glycosyl hydrolase family 35 protein
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a001120
Brachypodium KQK23022
Barley -
Wheat TraesCS4A02G048800 , TraesCS4B02G256000
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G394466 - -
2 Sobic.002G040201 - -
3 Sobic.003G243900 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
4 Sobic.001G366300 telomerase reverse transcriptase, putative, expressed K11126: TERT, telomerase reverse transcriptase
5 Sobic.010G111450 - -
6 Sobic.003G372600 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
7 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
8 Sobic.004G349550 - K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
9 Sobic.002G211300 aminotransferase, classes I and II, domain containing protein, expressed K00814: GPT, alanine transaminase
10 Sobic.010G269950 - -
11 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
12 Sobic.008G159000 - -
13 Sobic.002G197700 -(PubMedID : 23108465)@ZOS4-05 - C2H2 zinc finger protein, expressed -
14 Sobic.002G393100 dehydrogenase/reductase, putative, expressed -
15 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
16 Sobic.010G125000 steroid nuclear receptor, ligand-binding, putative, expressed -
17 Sobic.006G055900 expressed protein -
18 Sobic.003G051400 cytochrome c oxidase polypeptide Vc, putative, expressed -
19 Sobic.006G095900 OsSCP60 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
20 Sobic.006G167700 oleosin, putative, expressed -


Gene co-expression network
sample Sobic001G463600 Sobic001G463600 Sobic002G394466 Sobic002G394466 Sobic001G463600--Sobic002G394466 Sobic002G040201 Sobic002G040201 Sobic001G463600--Sobic002G040201 Sobic003G243900 Sobic003G243900 Sobic001G463600--Sobic003G243900 Sobic001G366300 Sobic001G366300 Sobic001G463600--Sobic001G366300 Sobic010G111450 Sobic010G111450 Sobic001G463600--Sobic010G111450 Sobic003G372600 Sobic003G372600 Sobic001G463600--Sobic003G372600 Sobic001G208500 Sobic001G208500 Sobic001G463600--Sobic001G208500 Sobic004G349550 Sobic004G349550 Sobic001G463600--Sobic004G349550 Sobic002G211300 Sobic002G211300 Sobic001G463600--Sobic002G211300 Sobic002G394466--Sobic001G463600 Sobic002G394466--Sobic002G040201 Sobic002G394466--Sobic004G349550 Sobic002G394466--Sobic001G366300 Sobic008G149300 Sobic008G149300 Sobic002G394466--Sobic008G149300 Sobic001G122600 Sobic001G122600 Sobic002G394466--Sobic001G122600 Sobic003G013950 Sobic003G013950 Sobic002G040201--Sobic003G013950 Sobic002G040201--Sobic010G111450 Sobic002G040201--Sobic001G463600 Sobic002G040201--Sobic002G394466 Sobic002G040201--Sobic003G243900 Sobic002G040201--Sobic001G366300 Sobic006G076100 Sobic006G076100 Sobic002G040201--Sobic006G076100 Sobic009G230000 Sobic009G230000 Sobic002G040201--Sobic009G230000 Sobic004G138600 Sobic004G138600 Sobic002G040201--Sobic004G138600 Sobic003G243900--Sobic001G463600 Sobic003G243900--Sobic002G040201 Sobic003G243900--Sobic002G394466 Sobic003G243900--Sobic009G230000 Sobic003G243900--Sobic010G111450 Sobic002G049900 Sobic002G049900 Sobic003G243900--Sobic002G049900 Sobic006G095900 Sobic006G095900 Sobic003G243900--Sobic006G095900 Sobic003G243900--Sobic001G366300 Sobic006G055900 Sobic006G055900 Sobic003G243900--Sobic006G055900 Sobic001G366300--Sobic001G463600 Sobic001G366300--Sobic002G394466 Sobic002G240000 Sobic002G240000 Sobic001G366300--Sobic002G240000 Sobic001G366300--Sobic002G040201 Sobic001G136400 Sobic001G136400 Sobic001G366300--Sobic001G136400 Sobic002G055800 Sobic002G055800 Sobic001G366300--Sobic002G055800 Sobic008G018100 Sobic008G018100 Sobic001G366300--Sobic008G018100 Sobic009G012500 Sobic009G012500 Sobic001G366300--Sobic009G012500 Sobic001G366300--Sobic008G149300 Sobic010G111450--Sobic002G040201 Sobic010G111450--Sobic003G013950 Sobic010G111450--Sobic006G076100 Sobic010G111450--Sobic002G394466 Sobic010G111450--Sobic001G463600 Sobic002G251050 Sobic002G251050 Sobic010G111450--Sobic002G251050 Sobic010G111450--Sobic001G366300 Sobic010G111450--Sobic004G138600 Sobic010G111450--Sobic003G243900 Sobic003G372600--Sobic001G208500 Sobic003G372600--Sobic002G211300 Sobic002G184700 Sobic002G184700 Sobic003G372600--Sobic002G184700 Sobic006G248000 Sobic006G248000 Sobic003G372600--Sobic006G248000 Sobic004G164800 Sobic004G164800 Sobic003G372600--Sobic004G164800 Sobic002G046000 Sobic002G046000 Sobic003G372600--Sobic002G046000 Sobic010G125000 Sobic010G125000 Sobic003G372600--Sobic010G125000 Sobic006G167700 Sobic006G167700 Sobic003G372600--Sobic006G167700 Sobic009G037100 Sobic009G037100 Sobic003G372600--Sobic009G037100 Sobic001G208500--Sobic003G372600 Sobic002G393100 Sobic002G393100 Sobic001G208500--Sobic002G393100 Sobic001G208500--Sobic004G164800 Sobic001G208500--Sobic002G211300 Sobic008G159000 Sobic008G159000 Sobic001G208500--Sobic008G159000 Sobic001G208500--Sobic002G184700 Sobic001G208500--Sobic009G037100 Sobic006G248100 Sobic006G248100 Sobic001G208500--Sobic006G248100 Sobic002G197700 Sobic002G197700 Sobic001G208500--Sobic002G197700 Sobic001G344300 Sobic001G344300 Sobic004G349550--Sobic001G344300 Sobic004G349550--Sobic008G149300 Sobic009G103800 Sobic009G103800 Sobic004G349550--Sobic009G103800 Sobic004G349550--Sobic006G167700 Sobic005G184700 Sobic005G184700 Sobic004G349550--Sobic005G184700 Sobic005G184800 Sobic005G184800 Sobic004G349550--Sobic005G184800 Sobic001G165600 Sobic001G165600 Sobic004G349550--Sobic001G165600 Sobic004G349550--Sobic002G184700 Sobic004G349550--Sobic001G122600 Sobic002G211300--Sobic010G125000 Sobic002G211300--Sobic003G372600 Sobic002G211300--Sobic006G248000 Sobic002G211300--Sobic006G167700 Sobic002G211300--Sobic001G208500 Sobic002G211300--Sobic001G165600 Sobic002G211300--Sobic002G197700 Sobic002G211300--Sobic004G164800 Sobic002G211300--Sobic008G159000
Octagon: transcription factors


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