Gene annotation
| Transcriptome id | Sobic.010G155100.1 |
|---|---|
| Synonym | SMB, Sb10g020860, ANAC033 |
| Functional annotation | NAC domain containing protein, putative, expressed |
| UniProt | A0A194YJE9 |
| Pfam | PF02365 |
| Panther DB | PTHR31989 PTHR31989:SF16 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding |
Orthologs (automatic annotation)
| TAIR | AT1G79580 : NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os06g33940.1 : NAC domain containing protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a042359 , Zm00025a050329 , Zm00025a019940 , Zm00025a050926 |
| Brachypodium | KQJ94263 , KQJ94262 , KQK18102 , PNT78278 , KQK18101 , KQK23882 |
| Barley | HORVU7Hr1G079500.1 , HORVU7Hr1G079500.3 , HORVU4Hr1G083050.2 , HORVU4Hr1G083050.3 , HORVU4Hr1G083050.4 , HORVU4Hr1G083050.5 , HORVU4Hr1G083050.6 , HORVU4Hr1G083050.7 , HORVU4Hr1G083050.8 , HORVU4Hr1G083050.9 , HORVU4Hr1G083050.10 , HORVU4Hr1G083050.11 , HORVU4Hr1G083050.15 , HORVU4Hr1G083050.12 , HORVU7Hr1G079500.4 , HORVU4Hr1G083050.13 , HORVU4Hr1G083050.14 |
| Wheat | TraesCS4A02G420200 , TraesCS5A02G491700 , TraesCS7D02G062600 , TraesCS7B02G233300 , TraesCS7D02G329200 , TraesCS7A02G349500 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G214300 | AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed | K09285: OVM, AP2-like factor, ANT lineage |
| 2 | Sobic.009G102400 | "domain confirmed by Pfam database, expressed in root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed | - |
| 3 | Sobic.004G112200 | no apical meristem protein, putative, expressed | - |
| 4 | Sobic.001G261400 | STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed | - |
| 5 | Sobic.010G134900 | DNA binding protein, putative, expressed | - |
| 6 | Sobic.006G205500 | glycosyl hydrolases family 16, putative, expressed | - |
| 7 | Sobic.002G239700 | receptor-like protein kinase 2 precursor, putative, expressed | - |
| 8 | Sobic.006G124200 | expressed protein | - |
| 9 | Sobic.003G019400 | expressed protein | - |
| 10 | Sobic.002G374650 | -(PubMedID : 26976818) | K11517: (S)-2-hydroxy-acid oxidase |
| 11 | Sobic.003G324600 | transcription factor-related, putative, expressed | - |
| 12 | Sobic.007G186600 | resistance protein, putative, expressed | - |
| 13 | Sobic.003G419300 | xylanase inhibitor, putative, expressed | - |
| 14 | Sobic.010G177300 | receptor-like protein kinase 2 precursor, putative, expressed | - |
| 15 | Sobic.008G077900 | exostosin family domain containing protein, expressed | - |
| 16 | Sobic.003G226800 | Relatively abundant in the susceptible sorghum under stress(PubMedID : 26645959)@RHsf 13/Put. Hsf 1(PubMedID : 27006630)@down-regulated TF in developmental senescence(PubMedID : 27586543)@HSF-type DNA-binding domain containing protein, expressed | K09419: heat shock transcription factor, other eukaryote |
| 17 | Sobic.006G117500 | polygalacturonase inhibitor 1 precursor, putative, expressed | - |
| 18 | Sobic.010G170300 | Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed | K01188: beta-glucosidase |
| 19 | Sobic.002G107400 | aldehyde oxidase, putative, expressed | - |
| 20 | Sobic.005G071700 | expressed protein | K13457: RPM1, disease resistance protein RPM1 |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
