Gene annotation
Transcriptome id Sobic.003G395200.1
Synonym Sb03g043230, TEL1
Functional annotation AML1, putative, expressed
UniProt C5XFI7
Pfam PF00076 PF04059
Panther DB PTHR24012 PTHR24012:SF415
NCBI CDD KOG4660; Protein Mei2, essential for commitment to meiosis, and related proteins
KEGG Orthology -
Gene Ontology GO:0003676; nucleic acid binding


Orthologs (automatic annotation)
TAIR AT3G26120 : terminal EAR1-like 1
RAP-DB (Rice) LOC_Os01g68000.1 : AML1, putative, expressed
MaizeGDB (Corn) Zm00025a026359
Brachypodium KQK11103 , PNT73416
Barley HORVU3Hr1G091930.3 , HORVU3Hr1G091930.2 , HORVU3Hr1G091930.1
Wheat TraesCS3B02G447800 , TraesCS3A02G413400 , TraesCS3D02G407900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G124200 expressed protein -
2 Sobic.009G102400 "domain confirmed by Pfam database, expressed in root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
3 Sobic.004G214300 AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
4 Sobic.001G261400 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
5 Sobic.003G019400 expressed protein -
6 Sobic.010G134900 DNA binding protein, putative, expressed -
7 Sobic.010G199500 expressed protein -
8 Sobic.004G029450 - -
9 Sobic.006G130600 TGF-beta receptor, type I/II extracellular region, putative, expressed -
10 Sobic.008G077900 exostosin family domain containing protein, expressed -
11 Sobic.003G419300 xylanase inhibitor, putative, expressed -
12 Sobic.005G105600 stripe rust resistance protein Yr10, putative, expressed K13457: RPM1, disease resistance protein RPM1
13 Sobic.002G239700 receptor-like protein kinase 2 precursor, putative, expressed -
14 Sobic.010G177300 receptor-like protein kinase 2 precursor, putative, expressed -
15 Sobic.006G013300 receptor-like protein kinase 2 precursor, putative, expressed -
16 Sobic.003G419400 xylanase inhibitor, putative, expressed -
17 Sobic.007G059400 transferase family protein, putative, expressed -
18 Sobic.002G230900 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
19 Sobic.001G538932 - -
20 Sobic.004G264200 helix-loop-helix DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic003G395200 Sobic003G395200 Sobic006G124200 Sobic006G124200 Sobic003G395200--Sobic006G124200 Sobic009G102400 Sobic009G102400 Sobic003G395200--Sobic009G102400 Sobic004G214300 Sobic004G214300 Sobic003G395200--Sobic004G214300 Sobic001G261400 Sobic001G261400 Sobic003G395200--Sobic001G261400 Sobic003G019400 Sobic003G019400 Sobic003G395200--Sobic003G019400 Sobic010G134900 Sobic010G134900 Sobic003G395200--Sobic010G134900 Sobic010G199500 Sobic010G199500 Sobic003G395200--Sobic010G199500 Sobic004G029450 Sobic004G029450 Sobic003G395200--Sobic004G029450 Sobic006G130600 Sobic006G130600 Sobic003G395200--Sobic006G130600 Sobic006G124200--Sobic009G102400 Sobic006G124200--Sobic004G214300 Sobic006G124200--Sobic001G261400 Sobic005G105600 Sobic005G105600 Sobic006G124200--Sobic005G105600 Sobic006G013300 Sobic006G013300 Sobic006G124200--Sobic006G013300 Sobic006G124200--Sobic010G134900 Sobic006G124200--Sobic003G019400 Sobic010G177300 Sobic010G177300 Sobic006G124200--Sobic010G177300 Sobic006G124200--Sobic003G395200 Sobic009G102400--Sobic006G124200 Sobic009G102400--Sobic004G214300 Sobic009G102400--Sobic001G261400 Sobic010G155100 Sobic010G155100 Sobic009G102400--Sobic010G155100 Sobic009G102400--Sobic010G134900 Sobic009G102400--Sobic010G177300 Sobic009G102400--Sobic006G013300 Sobic009G102400--Sobic005G105600 Sobic004G112200 Sobic004G112200 Sobic009G102400--Sobic004G112200 Sobic004G214300--Sobic009G102400 Sobic004G214300--Sobic006G124200 Sobic004G214300--Sobic010G155100 Sobic004G214300--Sobic010G134900 Sobic004G214300--Sobic001G261400 Sobic003G419300 Sobic003G419300 Sobic004G214300--Sobic003G419300 Sobic004G214300--Sobic003G019400 Sobic002G239700 Sobic002G239700 Sobic004G214300--Sobic002G239700 Sobic004G214300--Sobic004G112200 Sobic001G261400--Sobic010G134900 Sobic001G261400--Sobic004G214300 Sobic001G261400--Sobic009G102400 Sobic004G263700 Sobic004G263700 Sobic001G261400--Sobic004G263700 Sobic002G230900 Sobic002G230900 Sobic001G261400--Sobic002G230900 Sobic001G261400--Sobic006G124200 Sobic002G218600 Sobic002G218600 Sobic001G261400--Sobic002G218600 Sobic001G261400--Sobic010G177300 Sobic001G261400--Sobic010G155100 Sobic003G019400--Sobic004G214300 Sobic003G019400--Sobic003G419300 Sobic010G090100 Sobic010G090100 Sobic003G019400--Sobic010G090100 Sobic001G197800 Sobic001G197800 Sobic003G019400--Sobic001G197800 Sobic003G019400--Sobic001G261400 Sobic003G019400--Sobic006G124200 Sobic003G019400--Sobic009G102400 Sobic003G019400--Sobic004G029450 Sobic002G091000 Sobic002G091000 Sobic003G019400--Sobic002G091000 Sobic010G134900--Sobic001G261400 Sobic010G134900--Sobic004G214300 Sobic010G134900--Sobic009G102400 Sobic010G134900--Sobic006G124200 Sobic010G134900--Sobic003G419300 Sobic010G134900--Sobic010G155100 Sobic010G134900--Sobic002G239700 Sobic010G134900--Sobic004G112200 Sobic003G419400 Sobic003G419400 Sobic010G134900--Sobic003G419400 Sobic002G250300 Sobic002G250300 Sobic010G199500--Sobic002G250300 Sobic002G343100 Sobic002G343100 Sobic010G199500--Sobic002G343100 Sobic008G077900 Sobic008G077900 Sobic010G199500--Sobic008G077900 Sobic009G208700 Sobic009G208700 Sobic010G199500--Sobic009G208700 Sobic001G506800 Sobic001G506800 Sobic010G199500--Sobic001G506800 Sobic008G169300 Sobic008G169300 Sobic010G199500--Sobic008G169300 Sobic009G181600 Sobic009G181600 Sobic010G199500--Sobic009G181600 Sobic010G155800 Sobic010G155800 Sobic010G199500--Sobic010G155800 Sobic009G058600 Sobic009G058600 Sobic010G199500--Sobic009G058600 Sobic004G029450--Sobic003G019400 Sobic004G029450--Sobic004G263700 Sobic004G029450--Sobic001G261400 Sobic004G029450--Sobic010G090100 Sobic004G029450--Sobic006G130600 Sobic008G170500 Sobic008G170500 Sobic004G029450--Sobic008G170500 Sobic003G300900 Sobic003G300900 Sobic004G029450--Sobic003G300900 Sobic004G029450--Sobic006G124200 Sobic004G029450--Sobic002G230900 Sobic010G130500 Sobic010G130500 Sobic006G130600--Sobic010G130500 Sobic006G130600--Sobic003G019400 Sobic007G057450 Sobic007G057450 Sobic006G130600--Sobic007G057450 Sobic006G130600--Sobic004G029450 Sobic006G133400 Sobic006G133400 Sobic006G130600--Sobic006G133400 Sobic001G014700 Sobic001G014700 Sobic006G130600--Sobic001G014700 Sobic006G130600--Sobic003G419300 Sobic006G130600--Sobic002G343100 Sobic006G130600--Sobic002G250300
Octagon: transcription factors


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