Gene annotation
Transcriptome id Sobic.004G029450.1
Synonym -
Functional annotation -
UniProt A0A1Z5RKN8
Pfam PF01915
Panther DB PTHR30620 PTHR30620:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G20940 : Glycosyl hydrolase family protein
RAP-DB (Rice) LOC_Os03g53860.1 : periplasmic beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a034995 , Zm00025a008146
Brachypodium KQK13206
Barley HORVU5Hr1G095080.20 , HORVU5Hr1G095060.22 , HORVU5Hr1G095080.8 , HORVU5Hr1G095080.3 , HORVU5Hr1G095080.2 , HORVU5Hr1G095080.5 , HORVU5Hr1G095080.7 , HORVU5Hr1G095080.19 , HORVU5Hr1G095080.18 , HORVU5Hr1G095080.15 , HORVU5Hr1G095080.14 , HORVU5Hr1G095080.17 , HORVU5Hr1G095080.16 , HORVU5Hr1G095080.11 , HORVU5Hr1G095080.13 , HORVU5Hr1G095080.12 , HORVU3Hr1G034870.7 , HORVU3Hr1G034870.6 , HORVU3Hr1G034870.5 , HORVU3Hr1G034870.3 , HORVU3Hr1G034870.2 , HORVU3Hr1G034870.1 , HORVU5Hr1G095060.7 , HORVU5Hr1G095060.6 , HORVU5Hr1G095060.4 , HORVU5Hr1G095060.3 , HORVU5Hr1G095060.2 , HORVU5Hr1G095060.9 , HORVU5Hr1G095060.8 , HORVU5Hr1G095060.12 , HORVU5Hr1G095060.11 , HORVU5Hr1G095060.10 , HORVU5Hr1G095080.10
Wheat TraesCS5A02G388300 , TraesCS5D02G398900 , TraesCS3B02G203300 , TraesCS3B02G203300 , TraesCS3D02G179000 , TraesCS3A02G172500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G019400 expressed protein -
2 Sobic.004G263700 expressed protein -
3 Sobic.001G261400 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
4 Sobic.010G090100 phosphoglycerate mutase, putative, expressed K01834: PGAM, 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
5 Sobic.006G130600 TGF-beta receptor, type I/II extracellular region, putative, expressed -
6 Sobic.008G170500 AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
7 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
8 Sobic.006G124200 expressed protein -
9 Sobic.002G230900 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
10 Sobic.010G190300 lipid phosphatase protein, putative, expressed -
11 Sobic.003G405300 regulatory protein, putative, expressed -
12 Sobic.002G218600 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
13 Sobic.004G214300 AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
14 Sobic.003G395200 AML1, putative, expressed -
15 Sobic.010G199500 expressed protein -
16 Sobic.010G134900 DNA binding protein, putative, expressed -
17 Sobic.009G102400 "domain confirmed by Pfam database, expressed in root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
18 Sobic.008G169300 remorin family protein, putative, expressed -
19 Sobic.001G197800 - -
20 Sobic.003G419300 xylanase inhibitor, putative, expressed -


Gene co-expression network
sample Sobic004G029450 Sobic004G029450 Sobic003G019400 Sobic003G019400 Sobic004G029450--Sobic003G019400 Sobic004G263700 Sobic004G263700 Sobic004G029450--Sobic004G263700 Sobic001G261400 Sobic001G261400 Sobic004G029450--Sobic001G261400 Sobic010G090100 Sobic010G090100 Sobic004G029450--Sobic010G090100 Sobic006G130600 Sobic006G130600 Sobic004G029450--Sobic006G130600 Sobic008G170500 Sobic008G170500 Sobic004G029450--Sobic008G170500 Sobic003G300900 Sobic003G300900 Sobic004G029450--Sobic003G300900 Sobic006G124200 Sobic006G124200 Sobic004G029450--Sobic006G124200 Sobic002G230900 Sobic002G230900 Sobic004G029450--Sobic002G230900 Sobic004G214300 Sobic004G214300 Sobic003G019400--Sobic004G214300 Sobic003G419300 Sobic003G419300 Sobic003G019400--Sobic003G419300 Sobic003G019400--Sobic010G090100 Sobic001G197800 Sobic001G197800 Sobic003G019400--Sobic001G197800 Sobic003G019400--Sobic001G261400 Sobic003G019400--Sobic006G124200 Sobic009G102400 Sobic009G102400 Sobic003G019400--Sobic009G102400 Sobic003G019400--Sobic004G029450 Sobic002G091000 Sobic002G091000 Sobic003G019400--Sobic002G091000 Sobic001G260701 Sobic001G260701 Sobic004G263700--Sobic001G260701 Sobic004G263700--Sobic001G261400 Sobic002G218600 Sobic002G218600 Sobic004G263700--Sobic002G218600 Sobic004G233700 Sobic004G233700 Sobic004G263700--Sobic004G233700 Sobic001G304800 Sobic001G304800 Sobic004G263700--Sobic001G304800 Sobic007G113300 Sobic007G113300 Sobic004G263700--Sobic007G113300 Sobic004G263700--Sobic002G230900 Sobic006G073800 Sobic006G073800 Sobic004G263700--Sobic006G073800 Sobic004G263700--Sobic004G029450 Sobic010G134900 Sobic010G134900 Sobic001G261400--Sobic010G134900 Sobic001G261400--Sobic004G214300 Sobic001G261400--Sobic009G102400 Sobic001G261400--Sobic004G263700 Sobic001G261400--Sobic002G230900 Sobic001G261400--Sobic006G124200 Sobic001G261400--Sobic002G218600 Sobic010G177300 Sobic010G177300 Sobic001G261400--Sobic010G177300 Sobic010G155100 Sobic010G155100 Sobic001G261400--Sobic010G155100 Sobic010G090100--Sobic003G019400 Sobic010G090100--Sobic001G197800 Sobic010G090100--Sobic008G170500 Sobic010G090100--Sobic003G300900 Sobic006G245500 Sobic006G245500 Sobic010G090100--Sobic006G245500 Sobic008G135500 Sobic008G135500 Sobic010G090100--Sobic008G135500 Sobic010G090100--Sobic004G029450 Sobic010G090100--Sobic001G261400 Sobic010G090100--Sobic002G230900 Sobic010G130500 Sobic010G130500 Sobic006G130600--Sobic010G130500 Sobic006G130600--Sobic003G019400 Sobic007G057450 Sobic007G057450 Sobic006G130600--Sobic007G057450 Sobic006G130600--Sobic004G029450 Sobic006G133400 Sobic006G133400 Sobic006G130600--Sobic006G133400 Sobic001G014700 Sobic001G014700 Sobic006G130600--Sobic001G014700 Sobic006G130600--Sobic003G419300 Sobic002G343100 Sobic002G343100 Sobic006G130600--Sobic002G343100 Sobic002G250300 Sobic002G250300 Sobic006G130600--Sobic002G250300 Sobic008G170500--Sobic003G300900 Sobic008G170500--Sobic006G245500 Sobic008G170500--Sobic008G135500 Sobic001G205800 Sobic001G205800 Sobic008G170500--Sobic001G205800 Sobic008G170500--Sobic010G090100 Sobic008G170500--Sobic001G197800 Sobic003G128700 Sobic003G128700 Sobic008G170500--Sobic003G128700 Sobic001G385900 Sobic001G385900 Sobic008G170500--Sobic001G385900 Sobic008G170500--Sobic003G019400 Sobic003G300900--Sobic008G170500 Sobic010G190300 Sobic010G190300 Sobic003G300900--Sobic010G190300 Sobic003G300900--Sobic008G135500 Sobic003G300900--Sobic003G128700 Sobic001G410200 Sobic001G410200 Sobic003G300900--Sobic001G410200 Sobic006G200000 Sobic006G200000 Sobic003G300900--Sobic006G200000 Sobic001G397000 Sobic001G397000 Sobic003G300900--Sobic001G397000 Sobic003G300900--Sobic006G245500 Sobic003G300900--Sobic010G090100 Sobic006G124200--Sobic009G102400 Sobic006G124200--Sobic004G214300 Sobic006G124200--Sobic001G261400 Sobic005G105600 Sobic005G105600 Sobic006G124200--Sobic005G105600 Sobic006G013300 Sobic006G013300 Sobic006G124200--Sobic006G013300 Sobic006G124200--Sobic010G134900 Sobic006G124200--Sobic003G019400 Sobic006G124200--Sobic010G177300 Sobic003G395200 Sobic003G395200 Sobic006G124200--Sobic003G395200 Sobic002G230900--Sobic001G261400 Sobic002G230900--Sobic002G218600 Sobic004G311600 Sobic004G311600 Sobic002G230900--Sobic004G311600 Sobic007G218100 Sobic007G218100 Sobic002G230900--Sobic007G218100 Sobic002G230900--Sobic001G304800 Sobic002G230900--Sobic004G263700 Sobic002G230900--Sobic006G013300 Sobic002G230900--Sobic006G073800 Sobic002G230900--Sobic006G124200
Octagon: transcription factors


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