Gene annotation
Transcriptome id Sobic.006G130600.2
Synonym Sb06g021040
Functional annotation TGF-beta receptor, type I/II extracellular region, putative, expressed
UniProt A0A1Z5REC2
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF104
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G59740 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os04g41400.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a010900
Brachypodium -
Barley HORVU2Hr1G007730.3 , HORVU2Hr1G007730.2 , HORVU2Hr1G007730.1 , HORVU2Hr1G085210.8 , HORVU2Hr1G085210.9 , HORVU2Hr1G085210.2 , HORVU2Hr1G085210.3 , HORVU2Hr1G085210.1 , HORVU2Hr1G085210.6 , HORVU2Hr1G085210.7 , HORVU2Hr1G085210.4 , HORVU2Hr1G085210.5 , HORVU2Hr1G085210.18 , HORVU2Hr1G085210.19 , HORVU2Hr1G085210.10 , HORVU2Hr1G085210.11 , HORVU2Hr1G085210.12 , HORVU2Hr1G085210.13 , HORVU2Hr1G085210.14 , HORVU2Hr1G085210.15 , HORVU2Hr1G085210.16 , HORVU2Hr1G085210.17 , HORVU2Hr1G085210.21 , HORVU2Hr1G085210.20
Wheat TraesCS5B02G060800 , TraesCS2A02G350100 , TraesCS2D02G348500 , TraesCS2D02G348500 , TraesCS2D02G348500 , TraesCS2B02G368600 , TraesCS2B02G368600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G130500 SAM dependent carboxyl methyltransferase, putative, expressed -
2 Sobic.003G019400 expressed protein -
3 Sobic.007G057450 - -
4 Sobic.004G029450 - -
5 Sobic.006G133400 - -
6 Sobic.001G014700 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
7 Sobic.003G419300 xylanase inhibitor, putative, expressed -
8 Sobic.002G343100 protein kinase, putative, expressed -
9 Sobic.002G250300 dehydrogenase, putative, expressed -
10 Sobic.006G227500 - -
11 Sobic.010G147200 aluminum-activated malate transporter, putative, expressed -
12 Sobic.003G395200 AML1, putative, expressed -
13 Sobic.005G215000 cytochrome P450, putative, expressed -
14 Sobic.010G199500 expressed protein -
15 Sobic.001G259100 "up-regulated under drought stress, mapped into a stay green mQTL (QSTG meta2.1)"(PubMedID : 24655390)@SPX domain containing protein, putative, expressed -
16 Sobic.003G405300 regulatory protein, putative, expressed -
17 Sobic.004G323300 SCP-like extracellular protein, expressed -
18 Sobic.010G155800 proteins of unknown function domain containing protein, expressed -
19 Sobic.001G261509 - K09872: aquaporin PIP
20 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -


Gene co-expression network
sample Sobic006G130600 Sobic006G130600 Sobic010G130500 Sobic010G130500 Sobic006G130600--Sobic010G130500 Sobic003G019400 Sobic003G019400 Sobic006G130600--Sobic003G019400 Sobic007G057450 Sobic007G057450 Sobic006G130600--Sobic007G057450 Sobic004G029450 Sobic004G029450 Sobic006G130600--Sobic004G029450 Sobic006G133400 Sobic006G133400 Sobic006G130600--Sobic006G133400 Sobic001G014700 Sobic001G014700 Sobic006G130600--Sobic001G014700 Sobic003G419300 Sobic003G419300 Sobic006G130600--Sobic003G419300 Sobic002G343100 Sobic002G343100 Sobic006G130600--Sobic002G343100 Sobic002G250300 Sobic002G250300 Sobic006G130600--Sobic002G250300 Sobic003G282300 Sobic003G282300 Sobic010G130500--Sobic003G282300 Sobic010G130500--Sobic006G133400 Sobic007G086300 Sobic007G086300 Sobic010G130500--Sobic007G086300 Sobic010G130500--Sobic002G343100 Sobic009G208700 Sobic009G208700 Sobic010G130500--Sobic009G208700 Sobic008G035800 Sobic008G035800 Sobic010G130500--Sobic008G035800 Sobic004G106100 Sobic004G106100 Sobic010G130500--Sobic004G106100 Sobic003G095100 Sobic003G095100 Sobic010G130500--Sobic003G095100 Sobic004G029400 Sobic004G029400 Sobic010G130500--Sobic004G029400 Sobic004G214300 Sobic004G214300 Sobic003G019400--Sobic004G214300 Sobic003G019400--Sobic003G419300 Sobic010G090100 Sobic010G090100 Sobic003G019400--Sobic010G090100 Sobic001G197800 Sobic001G197800 Sobic003G019400--Sobic001G197800 Sobic001G261400 Sobic001G261400 Sobic003G019400--Sobic001G261400 Sobic006G124200 Sobic006G124200 Sobic003G019400--Sobic006G124200 Sobic009G102400 Sobic009G102400 Sobic003G019400--Sobic009G102400 Sobic003G019400--Sobic004G029450 Sobic002G091000 Sobic002G091000 Sobic003G019400--Sobic002G091000 Sobic001G379400 Sobic001G379400 Sobic007G057450--Sobic001G379400 Sobic006G089000 Sobic006G089000 Sobic007G057450--Sobic006G089000 Sobic001G502000 Sobic001G502000 Sobic007G057450--Sobic001G502000 Sobic001G229000 Sobic001G229000 Sobic007G057450--Sobic001G229000 Sobic006G227500 Sobic006G227500 Sobic007G057450--Sobic006G227500 Sobic007G050200 Sobic007G050200 Sobic007G057450--Sobic007G050200 Sobic010G147200 Sobic010G147200 Sobic007G057450--Sobic010G147200 Sobic005G160700 Sobic005G160700 Sobic007G057450--Sobic005G160700 Sobic006G003100 Sobic006G003100 Sobic007G057450--Sobic006G003100 Sobic004G029450--Sobic003G019400 Sobic004G263700 Sobic004G263700 Sobic004G029450--Sobic004G263700 Sobic004G029450--Sobic001G261400 Sobic004G029450--Sobic010G090100 Sobic004G029450--Sobic006G130600 Sobic008G170500 Sobic008G170500 Sobic004G029450--Sobic008G170500 Sobic003G300900 Sobic003G300900 Sobic004G029450--Sobic003G300900 Sobic004G029450--Sobic006G124200 Sobic002G230900 Sobic002G230900 Sobic004G029450--Sobic002G230900 Sobic006G133400--Sobic010G130500 Sobic003G053200 Sobic003G053200 Sobic006G133400--Sobic003G053200 Sobic010G031700 Sobic010G031700 Sobic006G133400--Sobic010G031700 Sobic006G133400--Sobic003G282300 Sobic001G301000 Sobic001G301000 Sobic006G133400--Sobic001G301000 Sobic001G271300 Sobic001G271300 Sobic006G133400--Sobic001G271300 Sobic003G441700 Sobic003G441700 Sobic006G133400--Sobic003G441700 Sobic006G133400--Sobic009G208700 Sobic001G539200 Sobic001G539200 Sobic006G133400--Sobic001G539200 Sobic003G280000 Sobic003G280000 Sobic001G014700--Sobic003G280000 Sobic001G014700--Sobic001G301000 Sobic002G366200 Sobic002G366200 Sobic001G014700--Sobic002G366200 Sobic001G014700--Sobic010G147200 Sobic005G119900 Sobic005G119900 Sobic001G014700--Sobic005G119900 Sobic003G353200 Sobic003G353200 Sobic001G014700--Sobic003G353200 Sobic005G202300 Sobic005G202300 Sobic001G014700--Sobic005G202300 Sobic008G164450 Sobic008G164450 Sobic001G014700--Sobic008G164450 Sobic008G010500 Sobic008G010500 Sobic001G014700--Sobic008G010500 Sobic001G232000 Sobic001G232000 Sobic003G419300--Sobic001G232000 Sobic003G419400 Sobic003G419400 Sobic003G419300--Sobic003G419400 Sobic003G419300--Sobic008G035800 Sobic009G058600 Sobic009G058600 Sobic003G419300--Sobic009G058600 Sobic002G239700 Sobic002G239700 Sobic003G419300--Sobic002G239700 Sobic003G419300--Sobic004G214300 Sobic003G324600 Sobic003G324600 Sobic003G419300--Sobic003G324600 Sobic004G112200 Sobic004G112200 Sobic003G419300--Sobic004G112200 Sobic003G419300--Sobic009G208700 Sobic009G181600 Sobic009G181600 Sobic002G343100--Sobic009G181600 Sobic002G343100--Sobic009G208700 Sobic002G343100--Sobic003G282300 Sobic007G090600 Sobic007G090600 Sobic002G343100--Sobic007G090600 Sobic002G343100--Sobic010G130500 Sobic006G092700 Sobic006G092700 Sobic002G343100--Sobic006G092700 Sobic004G322000 Sobic004G322000 Sobic002G343100--Sobic004G322000 Sobic002G343100--Sobic008G035800 Sobic002G343100--Sobic007G086300 Sobic002G250300--Sobic002G343100 Sobic010G199500 Sobic010G199500 Sobic002G250300--Sobic010G199500 Sobic002G250300--Sobic009G181600 Sobic002G250300--Sobic009G208700 Sobic004G322100 Sobic004G322100 Sobic002G250300--Sobic004G322100 Sobic002G250300--Sobic006G092700 Sobic004G323300 Sobic004G323300 Sobic002G250300--Sobic004G323300 Sobic004G271800 Sobic004G271800 Sobic002G250300--Sobic004G271800 Sobic010G028100 Sobic010G028100 Sobic002G250300--Sobic010G028100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.