Gene annotation
| Transcriptome id | Sobic.001G259100.1,Sobic.001G259100.2 |
|---|---|
| Synonym | SPX1, Sb01g023270, ATSPX1 |
| Functional annotation | "up-regulated under drought stress, mapped into a stay green mQTL (QSTG meta2.1)" (PubMedID : 24655390) SPX domain containing protein, putative, expressed |
| UniProt | A0A1B6QL36 , A0A1B6QL47 |
| Pfam | PF03105 |
| Panther DB | PTHR10783 PTHR10783:SF26 |
| NCBI CDD | KOG1161; Protein involved in vacuolar polyphosphate accumulation, contains SPX domain |
| KEGG Orthology | - |
| Gene Ontology | GO:0016036; cellular response to phosphate starvation |
Orthologs (automatic annotation)
| TAIR | AT2G45130 : SPX domain gene 1,SPX domain gene 3 |
|---|---|
| RAP-DB (Rice) | LOC_Os03g29250.1,LOC_Os10g25310.1 : SPX domain-containing protein, putative, expressed,SPX domain containing protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a028818 , Zm00025a002801 , Zm00025a007057 |
| Brachypodium | KQK15263 , KQK21334 , KQK21333 , PNT77265 |
| Barley | HORVU7Hr1G121090.1 , HORVU7Hr1G121090.2 , HORVU2Hr1G031400.4 , HORVU2Hr1G031400.5 , HORVU2Hr1G031400.1 , HORVU2Hr1G031400.2 , HORVU2Hr1G031400.3 |
| Wheat | TraesCS2A02G169600 , TraesCS7A02G554100 , TraesCSU02G094800 , TraesCS7D02G541100 , TraesCS7D02G541100 , TraesCS7B02G478000 , TraesCS7A02G554000 , TraesCS7A02G554800 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.010G147200 | aluminum-activated malate transporter, putative, expressed | - |
| 2 | Sobic.001G014700 | glucan endo-1,3-beta-glucosidase precursor, putative, expressed | - |
| 3 | Sobic.001G187300 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed | - |
| 4 | Sobic.005G177100 | glycosyl hydrolase, putative, expressed | - |
| 5 | Sobic.002G366200 | NAD dependent epimerase/dehydratase family protein, putative, expressed | - |
| 6 | Sobic.008G010500 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 7 | Sobic.007G177400 | OsFBX306 - F-box domain containing protein, expressed | - |
| 8 | Sobic.006G174300 | cis-zeatin O-glucosyltransferase, putative, expressed | K13495: cis-zeatin O-glucosyltransferase |
| 9 | Sobic.006G277700 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 10 | Sobic.007G064500 | peptide transporter PTR2, putative, expressed | - |
| 11 | Sobic.001G301000 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed | - |
| 12 | Sobic.008G057400 | S-locus-like receptor protein kinase, putative, expressed | - |
| 13 | Sobic.005G206000 | dirigent, putative, expressed | - |
| 14 | Sobic.001G231800 | glycine-rich cell wall structural protein 2 precursor, putative, expressed | - |
| 15 | Sobic.002G028632 | - | - |
| 16 | Sobic.003G280000 | myb-like DNA-binding domain containing protein, putative, expressed | K09422: transcription factor MYB, plant |
| 17 | Sobic.005G202300 | integral membrane protein TIGR01569 containing protein, expressed | - |
| 18 | Sobic.004G164300 | - | - |
| 19 | Sobic.003G183600 | Contains 1 SPX domain (protein involved in vacuolar phosphate accumulation)(PubMedID : 24655390)@Contains 1 SPX domain (protein involved in vacuolar phosphate accumulation)(PubMedID : 24655390)@SPX domain-containing protein, putative, expressed | - |
| 20 | Sobic.002G385500 | ribonuclease T2 family domain containing protein, expressed | K01166: ribonuclease T2 |
Gene co-expression network
Octagon: transcription factors
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