Gene annotation
| Transcriptome id | Sobic.010G090100.1 |
|---|---|
| Synonym | Sb10g007800 |
| Functional annotation | phosphoglycerate mutase, putative, expressed |
| UniProt | C5Z6Z7 |
| Pfam | PF00300 |
| Panther DB | PTHR11931 PTHR11931:SF6 |
| NCBI CDD | KOG0235; Phosphoglycerate mutase |
| KEGG Orthology | K01834; PGAM, 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase |
| Gene Ontology | GO:0016868; intramolecular transferase activity, phosphotransferases GO:0006096glycolytic process GO:0004619phosphoglycerate mutase activity |
Orthologs (automatic annotation)
| TAIR | AT1G22170 : Phosphoglycerate mutase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os02g51590.1 : phosphoglycerate mutase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a046860 |
| Brachypodium | KQK01882 , PNT76180 , PNT76179 , PNT76181 , KQK18910 |
| Barley | HORVU7Hr1G037350.4 , HORVU7Hr1G037350.19 , HORVU7Hr1G037350.13 , HORVU7Hr1G037350.12 , HORVU7Hr1G037350.11 , HORVU7Hr1G037350.10 , HORVU7Hr1G037350.17 , HORVU7Hr1G037350.16 , HORVU7Hr1G037350.15 , HORVU7Hr1G037350.14 , HORVU7Hr1G037350.18 , HORVU7Hr1G037350.20 , HORVU7Hr1G037350.3 , HORVU7Hr1G037350.2 , HORVU7Hr1G037350.1 , HORVU7Hr1G037350.7 , HORVU7Hr1G037350.6 , HORVU7Hr1G037350.5 , HORVU7Hr1G037350.9 , HORVU7Hr1G037350.8 |
| Wheat | TraesCS7D02G183400 , TraesCS7A02G182000 , TraesCS7A02G182000 , TraesCS7B02G086800 , TraesCS7B02G086800 |
| Populus | PNT35473 |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G019400 | expressed protein | - |
| 2 | Sobic.001G197800 | - | - |
| 3 | Sobic.008G170500 | AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed | - |
| 4 | Sobic.003G300900 | AAA-type ATPase family protein, putative, expressed | K07767: katanin p60 ATPase-containing subunit A1 |
| 5 | Sobic.006G245500 | down-regulated TF in developmental senescence(PubMedID : 27586543)@AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed | K09285: OVM, AP2-like factor, ANT lineage |
| 6 | Sobic.008G135500 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein | - |
| 7 | Sobic.004G029450 | - | - |
| 8 | Sobic.001G261400 | STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed | - |
| 9 | Sobic.002G230900 | cyclin, putative, expressed | K18810: cyclin D1/2/4, plant |
| 10 | Sobic.004G263700 | expressed protein | - |
| 11 | Sobic.006G247800 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 12 | Sobic.007G134800 | 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed | K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) |
| 13 | Sobic.003G128700 | flavin monooxygenase, putative, expressed | - |
| 14 | Sobic.001G386600 | homeobox domain containing protein, expressed | - |
| 15 | Sobic.004G347500 | 2-phosphoglycerate kinase-related, putative, expressed | - |
| 16 | Sobic.002G218600 | Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed | - |
| 17 | Sobic.001G155500 | transketolase, putative, expressed | K00162: PDHB, pyruvate dehydrogenase E1 component beta subunit |
| 18 | Sobic.003G196000 | expressed protein | - |
| 19 | Sobic.001G397000 | argininosuccinate lyase, putative, expressed | K01755: argH, argininosuccinate lyase |
| 20 | Sobic.007G112100 | enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed | K00208: enoyl-[acyl-carrier protein] reductase I |
Gene co-expression network
Octagon: transcription factors
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