Gene annotation
Transcriptome id Sobic.003G196000.3,Sobic.003G196000.2
Synonym Sb03g025880
Functional annotation expressed protein
UniProt C5XNT1
Pfam PF08263 PF13855 PF00069
Panther DB PTHR27006 PTHR27006:SF10
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G45340 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os01g39600.1 : expressed protein
MaizeGDB (Corn) Zm00025a028469 , Zm00025a040295 , Zm00025a038393
Brachypodium KQK08401 , KQK08400 , KQK08402 , KQK08399 , PNT72234 , PNT72233 , KQJ94884
Barley HORVU7Hr1G075220.3 , HORVU7Hr1G075220.2 , HORVU7Hr1G075220.5 , HORVU7Hr1G075220.4 , HORVU3Hr1G050110.7 , HORVU3Hr1G050110.4 , HORVU3Hr1G050110.5 , HORVU3Hr1G050110.2 , HORVU3Hr1G050110.3 , HORVU3Hr1G050110.1 , HORVU7Hr1G075220.7 , HORVU7Hr1G075220.6
Wheat TraesCS3B02G236500 , TraesCS3A02G208100 , TraesCS3A02G208100 , TraesCS3D02G210900 , TraesCS3D02G210900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G311600 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
2 Sobic.003G350400 thaumatin, putative, expressed -
3 Sobic.002G230900 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
4 Sobic.006G247800 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.007G218100 transmembrane receptor, putative, expressed -
6 Sobic.006G027900 amidase, putative, expressed K01426: E3.5.1.4, amidase
7 Sobic.008G135500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.002G286700 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
9 Sobic.003G246800 GATA zinc finger domain containing protein, expressed -
10 Sobic.002G256900 acyl-ACP thioesterase, putative, expressed K10782: fatty acyl-ACP thioesterase A
11 Sobic.010G090100 phosphoglycerate mutase, putative, expressed K01834: PGAM, 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
12 Sobic.001G448000 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
13 Sobic.009G053300 - -
14 Sobic.001G197800 - -
15 Sobic.001G112500 ZF-HD protein dimerisation region containing protein, expressed -
16 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
17 Sobic.010G177100 expressed protein -
18 Sobic.001G104500 growth-regulating factor, putative, expressed -
19 Sobic.007G097100 aspartic proteinase nepenthesin precursor, putative, expressed -
20 Sobic.009G045300 OsFBL21 - F-box domain and LRR containing protein, expressed K14485: transport inhibitor response 1


Gene co-expression network
sample Sobic003G196000 Sobic003G196000 Sobic004G311600 Sobic004G311600 Sobic003G196000--Sobic004G311600 Sobic003G350400 Sobic003G350400 Sobic003G196000--Sobic003G350400 Sobic002G230900 Sobic002G230900 Sobic003G196000--Sobic002G230900 Sobic006G247800 Sobic006G247800 Sobic003G196000--Sobic006G247800 Sobic007G218100 Sobic007G218100 Sobic003G196000--Sobic007G218100 Sobic006G027900 Sobic006G027900 Sobic003G196000--Sobic006G027900 Sobic008G135500 Sobic008G135500 Sobic003G196000--Sobic008G135500 Sobic002G286700 Sobic002G286700 Sobic003G196000--Sobic002G286700 Sobic003G246800 Sobic003G246800 Sobic003G196000--Sobic003G246800 Sobic004G311600--Sobic006G247800 Sobic004G311600--Sobic002G286700 Sobic006G255300 Sobic006G255300 Sobic004G311600--Sobic006G255300 Sobic004G311600--Sobic003G350400 Sobic004G311600--Sobic003G196000 Sobic001G276800 Sobic001G276800 Sobic004G311600--Sobic001G276800 Sobic004G311600--Sobic002G230900 Sobic007G097100 Sobic007G097100 Sobic004G311600--Sobic007G097100 Sobic004G139900 Sobic004G139900 Sobic004G311600--Sobic004G139900 Sobic002G256900 Sobic002G256900 Sobic003G350400--Sobic002G256900 Sobic006G016700 Sobic006G016700 Sobic003G350400--Sobic006G016700 Sobic003G350400--Sobic007G097100 Sobic003G350400--Sobic004G311600 Sobic006G041700 Sobic006G041700 Sobic003G350400--Sobic006G041700 Sobic004G330200 Sobic004G330200 Sobic003G350400--Sobic004G330200 Sobic002G175200 Sobic002G175200 Sobic003G350400--Sobic002G175200 Sobic001G246600 Sobic001G246600 Sobic003G350400--Sobic001G246600 Sobic004G142400 Sobic004G142400 Sobic003G350400--Sobic004G142400 Sobic001G261400 Sobic001G261400 Sobic002G230900--Sobic001G261400 Sobic002G218600 Sobic002G218600 Sobic002G230900--Sobic002G218600 Sobic002G230900--Sobic004G311600 Sobic002G230900--Sobic007G218100 Sobic001G304800 Sobic001G304800 Sobic002G230900--Sobic001G304800 Sobic004G263700 Sobic004G263700 Sobic002G230900--Sobic004G263700 Sobic006G013300 Sobic006G013300 Sobic002G230900--Sobic006G013300 Sobic006G073800 Sobic006G073800 Sobic002G230900--Sobic006G073800 Sobic006G124200 Sobic006G124200 Sobic002G230900--Sobic006G124200 Sobic006G247800--Sobic004G311600 Sobic009G084100 Sobic009G084100 Sobic006G247800--Sobic009G084100 Sobic006G247800--Sobic002G256900 Sobic002G232900 Sobic002G232900 Sobic006G247800--Sobic002G232900 Sobic006G247800--Sobic002G230900 Sobic006G247800--Sobic007G097100 Sobic001G336200 Sobic001G336200 Sobic006G247800--Sobic001G336200 Sobic004G207766 Sobic004G207766 Sobic006G247800--Sobic004G207766 Sobic006G247800--Sobic003G350400 Sobic001G532800 Sobic001G532800 Sobic007G218100--Sobic001G532800 Sobic007G218100--Sobic001G304800 Sobic004G052200 Sobic004G052200 Sobic007G218100--Sobic004G052200 Sobic002G230800 Sobic002G230800 Sobic007G218100--Sobic002G230800 Sobic007G218100--Sobic003G246800 Sobic006G275500 Sobic006G275500 Sobic007G218100--Sobic006G275500 Sobic002G392500 Sobic002G392500 Sobic007G218100--Sobic002G392500 Sobic001G104500 Sobic001G104500 Sobic007G218100--Sobic001G104500 Sobic008G159901 Sobic008G159901 Sobic007G218100--Sobic008G159901 Sobic006G027900--Sobic004G311600 Sobic006G027900--Sobic003G350400 Sobic006G027900--Sobic007G097100 Sobic001G112500 Sobic001G112500 Sobic006G027900--Sobic001G112500 Sobic006G027900--Sobic001G276800 Sobic006G027900--Sobic006G255300 Sobic006G027900--Sobic004G330200 Sobic006G027900--Sobic002G175200 Sobic006G027900--Sobic001G246600 Sobic003G300900 Sobic003G300900 Sobic008G135500--Sobic003G300900 Sobic008G170500 Sobic008G170500 Sobic008G135500--Sobic008G170500 Sobic010G090100 Sobic010G090100 Sobic008G135500--Sobic010G090100 Sobic006G245500 Sobic006G245500 Sobic008G135500--Sobic006G245500 Sobic003G128700 Sobic003G128700 Sobic008G135500--Sobic003G128700 Sobic008G135500--Sobic003G196000 Sobic008G135500--Sobic007G218100 Sobic001G197800 Sobic001G197800 Sobic008G135500--Sobic001G197800 Sobic007G134800 Sobic007G134800 Sobic008G135500--Sobic007G134800 Sobic008G190000 Sobic008G190000 Sobic002G286700--Sobic008G190000 Sobic002G286700--Sobic001G304800 Sobic002G286700--Sobic003G246800 Sobic008G083500 Sobic008G083500 Sobic002G286700--Sobic008G083500 Sobic002G296000 Sobic002G296000 Sobic002G286700--Sobic002G296000 Sobic009G101100 Sobic009G101100 Sobic002G286700--Sobic009G101100 Sobic001G461800 Sobic001G461800 Sobic002G286700--Sobic001G461800 Sobic006G105600 Sobic006G105600 Sobic002G286700--Sobic006G105600 Sobic003G032200 Sobic003G032200 Sobic002G286700--Sobic003G032200 Sobic003G246800--Sobic002G286700 Sobic003G246800--Sobic001G304800 Sobic003G246800--Sobic007G218100 Sobic003G246800--Sobic006G105600 Sobic003G246800--Sobic009G101100 Sobic010G024500 Sobic010G024500 Sobic003G246800--Sobic010G024500 Sobic003G246800--Sobic008G190000 Sobic003G246800--Sobic008G083500 Sobic003G246800--Sobic002G296000
Octagon: transcription factors


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