Gene annotation
Transcriptome id Sobic.005G009400.2,Sobic.005G009400.1
Synonym Sb05g000880
Functional annotation expressed protein
UniProt A0A1B6PPK0 , A0A1B6PPL5
Pfam -
Panther DB PTHR31945 PTHR31945:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40435 : -
RAP-DB (Rice) LOC_Os12g02020.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G019400 expressed protein -
2 Sobic.004G054000 expressed protein -
3 Sobic.002G230900 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
4 Sobic.001G538932 - -
5 Sobic.002G218600 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
6 Sobic.004G214300 AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
7 Sobic.001G261400 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
8 Sobic.006G124200 expressed protein -
9 Sobic.004G263700 expressed protein -
10 Sobic.010G177300 receptor-like protein kinase 2 precursor, putative, expressed -
11 Sobic.003G419300 xylanase inhibitor, putative, expressed -
12 Sobic.009G102400 "domain confirmed by Pfam database, expressed in root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
13 Sobic.008G077900 exostosin family domain containing protein, expressed -
14 Sobic.005G222600 RGH1A, putative, expressed K13457: RPM1, disease resistance protein RPM1
15 Sobic.010G130500 SAM dependent carboxyl methyltransferase, putative, expressed -
16 Sobic.006G133400 - -
17 Sobic.008G143000 expressed protein -
18 Sobic.005G025900 "domain confirmed by Pfam database, expression supported by NCBI EST database,expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
19 Sobic.007G113300 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
20 Sobic.003G419400 xylanase inhibitor, putative, expressed -


Gene co-expression network
sample Sobic005G009400 Sobic005G009400 Sobic003G019400 Sobic003G019400 Sobic005G009400--Sobic003G019400 Sobic004G054000 Sobic004G054000 Sobic005G009400--Sobic004G054000 Sobic002G230900 Sobic002G230900 Sobic005G009400--Sobic002G230900 Sobic001G538932 Sobic001G538932 Sobic005G009400--Sobic001G538932 Sobic002G218600 Sobic002G218600 Sobic005G009400--Sobic002G218600 Sobic004G214300 Sobic004G214300 Sobic005G009400--Sobic004G214300 Sobic001G261400 Sobic001G261400 Sobic005G009400--Sobic001G261400 Sobic006G124200 Sobic006G124200 Sobic005G009400--Sobic006G124200 Sobic004G263700 Sobic004G263700 Sobic005G009400--Sobic004G263700 Sobic003G019400--Sobic004G214300 Sobic003G419300 Sobic003G419300 Sobic003G019400--Sobic003G419300 Sobic010G090100 Sobic010G090100 Sobic003G019400--Sobic010G090100 Sobic001G197800 Sobic001G197800 Sobic003G019400--Sobic001G197800 Sobic003G019400--Sobic001G261400 Sobic003G019400--Sobic006G124200 Sobic009G102400 Sobic009G102400 Sobic003G019400--Sobic009G102400 Sobic004G029450 Sobic004G029450 Sobic003G019400--Sobic004G029450 Sobic002G091000 Sobic002G091000 Sobic003G019400--Sobic002G091000 Sobic008G168100 Sobic008G168100 Sobic004G054000--Sobic008G168100 Sobic009G250100 Sobic009G250100 Sobic004G054000--Sobic009G250100 Sobic009G059500 Sobic009G059500 Sobic004G054000--Sobic009G059500 Sobic003G324600 Sobic003G324600 Sobic004G054000--Sobic003G324600 Sobic008G143000 Sobic008G143000 Sobic004G054000--Sobic008G143000 Sobic006G201000 Sobic006G201000 Sobic004G054000--Sobic006G201000 Sobic004G054000--Sobic001G538932 Sobic007G113300 Sobic007G113300 Sobic004G054000--Sobic007G113300 Sobic010G155800 Sobic010G155800 Sobic004G054000--Sobic010G155800 Sobic002G230900--Sobic001G261400 Sobic002G230900--Sobic002G218600 Sobic004G311600 Sobic004G311600 Sobic002G230900--Sobic004G311600 Sobic007G218100 Sobic007G218100 Sobic002G230900--Sobic007G218100 Sobic001G304800 Sobic001G304800 Sobic002G230900--Sobic001G304800 Sobic002G230900--Sobic004G263700 Sobic006G013300 Sobic006G013300 Sobic002G230900--Sobic006G013300 Sobic006G073800 Sobic006G073800 Sobic002G230900--Sobic006G073800 Sobic002G230900--Sobic006G124200 Sobic005G222600 Sobic005G222600 Sobic001G538932--Sobic005G222600 Sobic002G076700 Sobic002G076700 Sobic001G538932--Sobic002G076700 Sobic001G538932--Sobic010G155800 Sobic001G538932--Sobic004G054000 Sobic003G001300 Sobic003G001300 Sobic001G538932--Sobic003G001300 Sobic001G538932--Sobic006G124200 Sobic010G152300 Sobic010G152300 Sobic001G538932--Sobic010G152300 Sobic001G538932--Sobic004G214300 Sobic006G092100 Sobic006G092100 Sobic001G538932--Sobic006G092100 Sobic002G218600--Sobic004G263700 Sobic002G218600--Sobic001G261400 Sobic009G146250 Sobic009G146250 Sobic002G218600--Sobic009G146250 Sobic002G218600--Sobic007G113300 Sobic002G218600--Sobic002G230900 Sobic006G120600 Sobic006G120600 Sobic002G218600--Sobic006G120600 Sobic010G103700 Sobic010G103700 Sobic002G218600--Sobic010G103700 Sobic002G218600--Sobic001G304800 Sobic003G179500 Sobic003G179500 Sobic002G218600--Sobic003G179500 Sobic004G214300--Sobic009G102400 Sobic004G214300--Sobic006G124200 Sobic010G155100 Sobic010G155100 Sobic004G214300--Sobic010G155100 Sobic010G134900 Sobic010G134900 Sobic004G214300--Sobic010G134900 Sobic004G214300--Sobic001G261400 Sobic004G214300--Sobic003G419300 Sobic004G214300--Sobic003G019400 Sobic002G239700 Sobic002G239700 Sobic004G214300--Sobic002G239700 Sobic004G112200 Sobic004G112200 Sobic004G214300--Sobic004G112200 Sobic001G261400--Sobic010G134900 Sobic001G261400--Sobic004G214300 Sobic001G261400--Sobic009G102400 Sobic001G261400--Sobic004G263700 Sobic001G261400--Sobic002G230900 Sobic001G261400--Sobic006G124200 Sobic001G261400--Sobic002G218600 Sobic010G177300 Sobic010G177300 Sobic001G261400--Sobic010G177300 Sobic001G261400--Sobic010G155100 Sobic006G124200--Sobic009G102400 Sobic006G124200--Sobic004G214300 Sobic006G124200--Sobic001G261400 Sobic005G105600 Sobic005G105600 Sobic006G124200--Sobic005G105600 Sobic006G124200--Sobic006G013300 Sobic006G124200--Sobic010G134900 Sobic006G124200--Sobic003G019400 Sobic006G124200--Sobic010G177300 Sobic003G395200 Sobic003G395200 Sobic006G124200--Sobic003G395200 Sobic001G260701 Sobic001G260701 Sobic004G263700--Sobic001G260701 Sobic004G263700--Sobic001G261400 Sobic004G263700--Sobic002G218600 Sobic004G233700 Sobic004G233700 Sobic004G263700--Sobic004G233700 Sobic004G263700--Sobic001G304800 Sobic004G263700--Sobic007G113300 Sobic004G263700--Sobic002G230900 Sobic004G263700--Sobic006G073800 Sobic004G263700--Sobic004G029450
Octagon: transcription factors


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