Gene annotation
Transcriptome id Sobic.002G091000.1
Synonym Sb02g007547
Functional annotation -
UniProt A0A1B6QA69
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a045506
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G419400 xylanase inhibitor, putative, expressed -
2 Sobic.003G419300 xylanase inhibitor, putative, expressed -
3 Sobic.003G019400 expressed protein -
4 Sobic.010G134900 DNA binding protein, putative, expressed -
5 Sobic.004G214300 AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
6 Sobic.001G542200 expansin precursor, putative, expressed -
7 Sobic.010G027300 DNA binding protein, putative, expressed -
8 Sobic.001G261400 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
9 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
10 Sobic.002G218600 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
11 Sobic.002G239700 receptor-like protein kinase 2 precursor, putative, expressed -
12 Sobic.010G090100 phosphoglycerate mutase, putative, expressed K01834: PGAM, 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
13 Sobic.003G324600 transcription factor-related, putative, expressed -
14 Sobic.003G041500 WD domain, G-beta repeat domain containing protein, expressed K14553: U3 small nucleolar RNA-associated protein 18
15 Sobic.006G227500 - -
16 Sobic.004G263700 expressed protein -
17 Sobic.001G203700 formin-like protein 6 precursor, putative, expressed -
18 Sobic.004G264200 helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.003G340100 "domain confirmed by Pfam database, expressed in leaf, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
20 Sobic.004G112200 no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic002G091000 Sobic002G091000 Sobic003G419400 Sobic003G419400 Sobic002G091000--Sobic003G419400 Sobic003G419300 Sobic003G419300 Sobic002G091000--Sobic003G419300 Sobic003G019400 Sobic003G019400 Sobic002G091000--Sobic003G019400 Sobic010G134900 Sobic010G134900 Sobic002G091000--Sobic010G134900 Sobic004G214300 Sobic004G214300 Sobic002G091000--Sobic004G214300 Sobic001G542200 Sobic001G542200 Sobic002G091000--Sobic001G542200 Sobic010G027300 Sobic010G027300 Sobic002G091000--Sobic010G027300 Sobic001G261400 Sobic001G261400 Sobic002G091000--Sobic001G261400 Sobic003G300900 Sobic003G300900 Sobic002G091000--Sobic003G300900 Sobic003G419400--Sobic003G419300 Sobic001G232000 Sobic001G232000 Sobic003G419400--Sobic001G232000 Sobic002G239700 Sobic002G239700 Sobic003G419400--Sobic002G239700 Sobic002G076700 Sobic002G076700 Sobic003G419400--Sobic002G076700 Sobic003G419400--Sobic002G091000 Sobic009G208700 Sobic009G208700 Sobic003G419400--Sobic009G208700 Sobic003G419400--Sobic004G214300 Sobic008G077900 Sobic008G077900 Sobic003G419400--Sobic008G077900 Sobic005G071700 Sobic005G071700 Sobic003G419400--Sobic005G071700 Sobic003G419300--Sobic001G232000 Sobic003G419300--Sobic003G419400 Sobic008G035800 Sobic008G035800 Sobic003G419300--Sobic008G035800 Sobic009G058600 Sobic009G058600 Sobic003G419300--Sobic009G058600 Sobic003G419300--Sobic002G239700 Sobic003G419300--Sobic004G214300 Sobic003G324600 Sobic003G324600 Sobic003G419300--Sobic003G324600 Sobic004G112200 Sobic004G112200 Sobic003G419300--Sobic004G112200 Sobic003G419300--Sobic009G208700 Sobic003G019400--Sobic004G214300 Sobic003G019400--Sobic003G419300 Sobic010G090100 Sobic010G090100 Sobic003G019400--Sobic010G090100 Sobic001G197800 Sobic001G197800 Sobic003G019400--Sobic001G197800 Sobic003G019400--Sobic001G261400 Sobic006G124200 Sobic006G124200 Sobic003G019400--Sobic006G124200 Sobic009G102400 Sobic009G102400 Sobic003G019400--Sobic009G102400 Sobic004G029450 Sobic004G029450 Sobic003G019400--Sobic004G029450 Sobic003G019400--Sobic002G091000 Sobic010G134900--Sobic001G261400 Sobic010G134900--Sobic004G214300 Sobic010G134900--Sobic009G102400 Sobic010G134900--Sobic006G124200 Sobic010G134900--Sobic003G419300 Sobic010G155100 Sobic010G155100 Sobic010G134900--Sobic010G155100 Sobic010G134900--Sobic002G239700 Sobic010G134900--Sobic004G112200 Sobic010G134900--Sobic003G419400 Sobic004G214300--Sobic009G102400 Sobic004G214300--Sobic006G124200 Sobic004G214300--Sobic010G155100 Sobic004G214300--Sobic010G134900 Sobic004G214300--Sobic001G261400 Sobic004G214300--Sobic003G419300 Sobic004G214300--Sobic003G019400 Sobic004G214300--Sobic002G239700 Sobic004G214300--Sobic004G112200 Sobic001G542200--Sobic003G419300 Sobic001G542200--Sobic009G058600 Sobic006G227500 Sobic006G227500 Sobic001G542200--Sobic006G227500 Sobic001G542200--Sobic001G232000 Sobic004G323300 Sobic004G323300 Sobic001G542200--Sobic004G323300 Sobic001G542200--Sobic003G419400 Sobic001G542200--Sobic010G134900 Sobic001G542200--Sobic004G112200 Sobic001G542200--Sobic003G324600 Sobic003G205600 Sobic003G205600 Sobic010G027300--Sobic003G205600 Sobic001G264000 Sobic001G264000 Sobic010G027300--Sobic001G264000 Sobic004G348800 Sobic004G348800 Sobic010G027300--Sobic004G348800 Sobic003G093700 Sobic003G093700 Sobic010G027300--Sobic003G093700 Sobic003G269600 Sobic003G269600 Sobic010G027300--Sobic003G269600 Sobic010G212500 Sobic010G212500 Sobic010G027300--Sobic010G212500 Sobic002G404100 Sobic002G404100 Sobic010G027300--Sobic002G404100 Sobic001G430100 Sobic001G430100 Sobic010G027300--Sobic001G430100 Sobic004G249000 Sobic004G249000 Sobic010G027300--Sobic004G249000 Sobic001G261400--Sobic010G134900 Sobic001G261400--Sobic004G214300 Sobic001G261400--Sobic009G102400 Sobic004G263700 Sobic004G263700 Sobic001G261400--Sobic004G263700 Sobic002G230900 Sobic002G230900 Sobic001G261400--Sobic002G230900 Sobic001G261400--Sobic006G124200 Sobic002G218600 Sobic002G218600 Sobic001G261400--Sobic002G218600 Sobic010G177300 Sobic010G177300 Sobic001G261400--Sobic010G177300 Sobic001G261400--Sobic010G155100 Sobic008G170500 Sobic008G170500 Sobic003G300900--Sobic008G170500 Sobic010G190300 Sobic010G190300 Sobic003G300900--Sobic010G190300 Sobic008G135500 Sobic008G135500 Sobic003G300900--Sobic008G135500 Sobic003G128700 Sobic003G128700 Sobic003G300900--Sobic003G128700 Sobic001G410200 Sobic001G410200 Sobic003G300900--Sobic001G410200 Sobic006G200000 Sobic006G200000 Sobic003G300900--Sobic006G200000 Sobic001G397000 Sobic001G397000 Sobic003G300900--Sobic001G397000 Sobic006G245500 Sobic006G245500 Sobic003G300900--Sobic006G245500 Sobic003G300900--Sobic010G090100
Octagon: transcription factors


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