Gene annotation
Transcriptome id Sobic.003G386800.1
Synonym Sb03g042520
Functional annotation auxin-responsive protein, putative, expressed
UniProt C5XET3
Pfam PF03188
Panther DB PTHR23130 PTHR23130:SF101
NCBI CDD KOG4293; Predicted membrane protein, contains DoH and Cytochrome b-561/ferric reductase transmembrane domains
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G07570 : Cytochrome b561/ferric reductase transmembrane with DOMON related domain
RAP-DB (Rice) LOC_Os01g67030.1 : auxin-responsive protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G128700 flavin monooxygenase, putative, expressed -
2 Sobic.006G245500 down-regulated TF in developmental senescence(PubMedID : 27586543)@AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
3 Sobic.008G170500 AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
4 Sobic.001G386600 homeobox domain containing protein, expressed -
5 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
6 Sobic.001G205800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lanC-like protein 2, putative, expressed -
7 Sobic.003G098300 hydroxyproline-rich glycoprotein family protein, putative, expressed -
8 Sobic.008G075350 - -
9 Sobic.010G090100 phosphoglycerate mutase, putative, expressed K01834: PGAM, 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
10 Sobic.004G347500 2-phosphoglycerate kinase-related, putative, expressed -
11 Sobic.001G454000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
12 Sobic.001G197800 - -
13 Sobic.009G052600 universal stress protein domain containing protein, putative, expressed -
14 Sobic.004G222900 - -
15 Sobic.007G191500 - -
16 Sobic.002G177600 expressed protein -
17 Sobic.003G363400 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
18 Sobic.003G011800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed K00606: 3-methyl-2-oxobutanoate hydroxymethyltransferase
19 Sobic.009G230000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@transcription factor HBP-1b, putative, expressed -
20 Sobic.001G261420 - -


Gene co-expression network
sample Sobic003G386800 Sobic003G386800 Sobic003G128700 Sobic003G128700 Sobic003G386800--Sobic003G128700 Sobic006G245500 Sobic006G245500 Sobic003G386800--Sobic006G245500 Sobic008G170500 Sobic008G170500 Sobic003G386800--Sobic008G170500 Sobic001G386600 Sobic001G386600 Sobic003G386800--Sobic001G386600 Sobic003G300900 Sobic003G300900 Sobic003G386800--Sobic003G300900 Sobic001G205800 Sobic001G205800 Sobic003G386800--Sobic001G205800 Sobic003G098300 Sobic003G098300 Sobic003G386800--Sobic003G098300 Sobic008G075350 Sobic008G075350 Sobic003G386800--Sobic008G075350 Sobic010G090100 Sobic010G090100 Sobic003G386800--Sobic010G090100 Sobic003G128700--Sobic003G300900 Sobic003G128700--Sobic006G245500 Sobic003G128700--Sobic008G170500 Sobic003G128700--Sobic003G386800 Sobic001G397100 Sobic001G397100 Sobic003G128700--Sobic001G397100 Sobic008G135500 Sobic008G135500 Sobic003G128700--Sobic008G135500 Sobic003G128700--Sobic010G090100 Sobic002G242300 Sobic002G242300 Sobic003G128700--Sobic002G242300 Sobic008G034300 Sobic008G034300 Sobic003G128700--Sobic008G034300 Sobic006G245500--Sobic008G170500 Sobic006G245500--Sobic003G128700 Sobic006G245500--Sobic003G300900 Sobic006G245500--Sobic008G034300 Sobic006G245500--Sobic010G090100 Sobic006G245500--Sobic001G205800 Sobic006G245500--Sobic001G397100 Sobic006G245500--Sobic008G135500 Sobic001G197800 Sobic001G197800 Sobic006G245500--Sobic001G197800 Sobic008G170500--Sobic003G300900 Sobic008G170500--Sobic006G245500 Sobic008G170500--Sobic008G135500 Sobic008G170500--Sobic001G205800 Sobic008G170500--Sobic010G090100 Sobic008G170500--Sobic001G197800 Sobic008G170500--Sobic003G128700 Sobic001G385900 Sobic001G385900 Sobic008G170500--Sobic001G385900 Sobic003G019400 Sobic003G019400 Sobic008G170500--Sobic003G019400 Sobic001G261420 Sobic001G261420 Sobic001G386600--Sobic001G261420 Sobic001G386600--Sobic008G075350 Sobic007G191500 Sobic007G191500 Sobic001G386600--Sobic007G191500 Sobic002G204350 Sobic002G204350 Sobic001G386600--Sobic002G204350 Sobic001G004600 Sobic001G004600 Sobic001G386600--Sobic001G004600 Sobic005G021000 Sobic005G021000 Sobic001G386600--Sobic005G021000 Sobic004G347500 Sobic004G347500 Sobic001G386600--Sobic004G347500 Sobic001G165600 Sobic001G165600 Sobic001G386600--Sobic001G165600 Sobic001G122600 Sobic001G122600 Sobic001G386600--Sobic001G122600 Sobic003G300900--Sobic008G170500 Sobic010G190300 Sobic010G190300 Sobic003G300900--Sobic010G190300 Sobic003G300900--Sobic008G135500 Sobic003G300900--Sobic003G128700 Sobic001G410200 Sobic001G410200 Sobic003G300900--Sobic001G410200 Sobic006G200000 Sobic006G200000 Sobic003G300900--Sobic006G200000 Sobic001G397000 Sobic001G397000 Sobic003G300900--Sobic001G397000 Sobic003G300900--Sobic006G245500 Sobic003G300900--Sobic010G090100 Sobic001G205800--Sobic008G170500 Sobic001G205800--Sobic001G385900 Sobic001G205800--Sobic008G034300 Sobic001G205800--Sobic006G245500 Sobic010G221800 Sobic010G221800 Sobic001G205800--Sobic010G221800 Sobic010G164400 Sobic010G164400 Sobic001G205800--Sobic010G164400 Sobic001G205800--Sobic003G128700 Sobic001G205800--Sobic003G386800 Sobic001G205800--Sobic003G300900 Sobic003G098300--Sobic004G347500 Sobic003G098300--Sobic005G021000 Sobic006G208000 Sobic006G208000 Sobic003G098300--Sobic006G208000 Sobic001G336200 Sobic001G336200 Sobic003G098300--Sobic001G336200 Sobic003G419500 Sobic003G419500 Sobic003G098300--Sobic003G419500 Sobic002G232900 Sobic002G232900 Sobic003G098300--Sobic002G232900 Sobic001G508200 Sobic001G508200 Sobic003G098300--Sobic001G508200 Sobic009G025500 Sobic009G025500 Sobic003G098300--Sobic009G025500 Sobic002G240000 Sobic002G240000 Sobic003G098300--Sobic002G240000 Sobic005G139150 Sobic005G139150 Sobic008G075350--Sobic005G139150 Sobic008G075350--Sobic001G386600 Sobic008G075350--Sobic001G261420 Sobic008G075350--Sobic002G204350 Sobic001G298032 Sobic001G298032 Sobic008G075350--Sobic001G298032 Sobic008G075350--Sobic007G191500 Sobic008G075350--Sobic001G122600 Sobic010G090100--Sobic003G019400 Sobic010G090100--Sobic001G197800 Sobic010G090100--Sobic008G170500 Sobic010G090100--Sobic003G300900 Sobic010G090100--Sobic006G245500 Sobic010G090100--Sobic008G135500 Sobic004G029450 Sobic004G029450 Sobic010G090100--Sobic004G029450 Sobic001G261400 Sobic001G261400 Sobic010G090100--Sobic001G261400 Sobic002G230900 Sobic002G230900 Sobic010G090100--Sobic002G230900
Octagon: transcription factors


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