Gene annotation
Transcriptome id Sobic.009G152600.1
Synonym AtPPa3, PPa3, Sb09g021610
Functional annotation - (PubMedID : 26976818)
soluble inorganic pyrophosphatase, putative, expressed
UniProt C5YYQ6
Pfam PF00719
Panther DB PTHR10286 PTHR10286:SF10
NCBI CDD KOG1626; Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38
KEGG Orthology K01507; inorganic pyrophosphatase
Gene Ontology GO:0006796; phosphate-containing compound metabolic process GO:0005737cytoplasm GO:0004427inorganic diphosphatase activity GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT2G46860 : pyrophosphorylase 3
RAP-DB (Rice) LOC_Os05g36260.1 : soluble inorganic pyrophosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a037292 , Zm00025a017814
Brachypodium KQK11796 , KQK11795 , KQK06046 , PNT73691 , PNT73690
Barley HORVU6Hr1G058900.3 , HORVU6Hr1G058900.4 , HORVU3Hr1G116650.1 , HORVU3Hr1G116650.2 , HORVU7Hr1G085380.1 , HORVU7Hr1G085380.2 , HORVU3Hr1G116650.4 , HORVU3Hr1G116580.1 , HORVU6Hr1G058900.2 , HORVU3Hr1G116580.3 , HORVU3Hr1G116580.4 , HORVU3Hr1G116580.5 , HORVU3Hr1G116580.6 , HORVU3Hr1G116650.3 , HORVU3Hr1G116650.5 , HORVU2Hr1G065020.1 , HORVU3Hr1G116650.6 , HORVU1Hr1G075110.8 , HORVU1Hr1G075110.1 , HORVU1Hr1G075110.3 , HORVU1Hr1G075110.2 , HORVU1Hr1G075110.5 , HORVU1Hr1G075110.4 , HORVU1Hr1G075110.7 , HORVU1Hr1G075110.6 , HORVU3Hr1G116650.7 , HORVU6Hr1G058900.1 , HORVU3Hr1G116580.2
Wheat TraesCS3B02G611600 , TraesCS2A02G576400 , TraesCS3B02G611800 , TraesCS1B02G283300 , TraesCS3A02G534500 , TraesCS3A02G534700 , TraesCS3D02G540100 , TraesCS3D02G540100 , TraesCS1A02G273500 , TraesCS1D02G273500 , TraesCS3D02G539900
Populus -


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cDNA sequences
Sobic.009G152600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G353300 expressed protein -
2 Sobic.009G021600 Jacalin-like lectin domain containing protein, putative, expressed -
3 Sobic.008G186100 helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
5 Sobic.003G086600 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
6 Sobic.008G118700 respiratory burst oxidase, putative, expressed -
7 Sobic.001G031700 nucleobase-ascorbate transporter, putative, expressed -
8 Sobic.003G377100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
9 Sobic.001G405500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate decarboxylase isozyme 2, putative, expressed K01568: PDC, pyruvate decarboxylase
10 Sobic.002G250000 Protein dihydroflavonol-4-reductase DFR (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed -
11 Sobic.004G146000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
12 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
14 Sobic.001G108200 expressed protein -
15 Sobic.003G033900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
16 Sobic.002G068600 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
17 Sobic.002G188900 cytokinin-O-glucosyltransferase 1, putative, expressed -
18 Sobic.002G393400 chaperonin, putative, expressed K04078: groES, chaperonin GroES
19 Sobic.007G214600 EF hand family protein, putative, expressed -
20 Sobic.003G394400 ubiquitin family protein, putative, expressed -


Gene co-expression network
sample Sobic009G152600 Sobic009G152600 Sobic003G353300 Sobic003G353300 Sobic009G152600--Sobic003G353300 Sobic009G021600 Sobic009G021600 Sobic009G152600--Sobic009G021600 Sobic008G186100 Sobic008G186100 Sobic009G152600--Sobic008G186100 Sobic003G393900 Sobic003G393900 Sobic009G152600--Sobic003G393900 Sobic003G086600 Sobic003G086600 Sobic009G152600--Sobic003G086600 Sobic008G118700 Sobic008G118700 Sobic009G152600--Sobic008G118700 Sobic001G031700 Sobic001G031700 Sobic009G152600--Sobic001G031700 Sobic003G377100 Sobic003G377100 Sobic009G152600--Sobic003G377100 Sobic001G405500 Sobic001G405500 Sobic009G152600--Sobic001G405500 Sobic003G353300--Sobic008G118700 Sobic003G353300--Sobic009G152600 Sobic002G068600 Sobic002G068600 Sobic003G353300--Sobic002G068600 Sobic003G353300--Sobic003G086600 Sobic001G149800 Sobic001G149800 Sobic003G353300--Sobic001G149800 Sobic001G254100 Sobic001G254100 Sobic003G353300--Sobic001G254100 Sobic004G166200 Sobic004G166200 Sobic003G353300--Sobic004G166200 Sobic003G353300--Sobic001G405500 Sobic001G201200 Sobic001G201200 Sobic003G353300--Sobic001G201200 Sobic010G184800 Sobic010G184800 Sobic009G021600--Sobic010G184800 Sobic009G021600--Sobic009G152600 Sobic009G021600--Sobic008G186100 Sobic009G021600--Sobic001G031700 Sobic001G304100 Sobic001G304100 Sobic009G021600--Sobic001G304100 Sobic006G234800 Sobic006G234800 Sobic009G021600--Sobic006G234800 Sobic010G029700 Sobic010G029700 Sobic009G021600--Sobic010G029700 Sobic002G250000 Sobic002G250000 Sobic009G021600--Sobic002G250000 Sobic001G302600 Sobic001G302600 Sobic009G021600--Sobic001G302600 Sobic005G011300 Sobic005G011300 Sobic008G186100--Sobic005G011300 Sobic002G287100 Sobic002G287100 Sobic008G186100--Sobic002G287100 Sobic004G100700 Sobic004G100700 Sobic008G186100--Sobic004G100700 Sobic001G169500 Sobic001G169500 Sobic008G186100--Sobic001G169500 Sobic008G186100--Sobic010G029700 Sobic006G249300 Sobic006G249300 Sobic008G186100--Sobic006G249300 Sobic001G139100 Sobic001G139100 Sobic008G186100--Sobic001G139100 Sobic008G186100--Sobic002G250000 Sobic006G092500 Sobic006G092500 Sobic008G186100--Sobic006G092500 Sobic004G141200 Sobic004G141200 Sobic003G393900--Sobic004G141200 Sobic001G108200 Sobic001G108200 Sobic003G393900--Sobic001G108200 Sobic001G459800 Sobic001G459800 Sobic003G393900--Sobic001G459800 Sobic003G393900--Sobic004G100700 Sobic002G188900 Sobic002G188900 Sobic003G393900--Sobic002G188900 Sobic004G065500 Sobic004G065500 Sobic003G393900--Sobic004G065500 Sobic006G267200 Sobic006G267200 Sobic003G393900--Sobic006G267200 Sobic003G393900--Sobic005G011300 Sobic003G369100 Sobic003G369100 Sobic003G393900--Sobic003G369100 Sobic003G086600--Sobic002G068600 Sobic003G394400 Sobic003G394400 Sobic003G086600--Sobic003G394400 Sobic003G086600--Sobic001G405500 Sobic003G086600--Sobic001G108200 Sobic003G086600--Sobic004G166200 Sobic003G382800 Sobic003G382800 Sobic003G086600--Sobic003G382800 Sobic003G355100 Sobic003G355100 Sobic003G086600--Sobic003G355100 Sobic001G397200 Sobic001G397200 Sobic003G086600--Sobic001G397200 Sobic007G026600 Sobic007G026600 Sobic003G086600--Sobic007G026600 Sobic008G118700--Sobic003G377100 Sobic008G118700--Sobic002G068600 Sobic001G107800 Sobic001G107800 Sobic008G118700--Sobic001G107800 Sobic008G118700--Sobic001G201200 Sobic008G118700--Sobic001G254100 Sobic008G118700--Sobic001G149800 Sobic001G371800 Sobic001G371800 Sobic008G118700--Sobic001G371800 Sobic003G148600 Sobic003G148600 Sobic008G118700--Sobic003G148600 Sobic008G118700--Sobic003G353300 Sobic004G041900 Sobic004G041900 Sobic001G031700--Sobic004G041900 Sobic007G017500 Sobic007G017500 Sobic001G031700--Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic001G031700--Sobic006G075400 Sobic001G295200 Sobic001G295200 Sobic001G031700--Sobic001G295200 Sobic007G058400 Sobic007G058400 Sobic001G031700--Sobic007G058400 Sobic003G432700 Sobic003G432700 Sobic001G031700--Sobic003G432700 Sobic010G221300 Sobic010G221300 Sobic001G031700--Sobic010G221300 Sobic004G294400 Sobic004G294400 Sobic001G031700--Sobic004G294400 Sobic001G313600 Sobic001G313600 Sobic001G031700--Sobic001G313600 Sobic003G377100--Sobic003G148600 Sobic003G377100--Sobic002G068600 Sobic003G377100--Sobic003G086600 Sobic003G377100--Sobic001G405500 Sobic003G377100--Sobic008G118700 Sobic003G377100--Sobic004G166200 Sobic003G377100--Sobic003G355100 Sobic003G377100--Sobic001G108200 Sobic003G197200 Sobic003G197200 Sobic003G377100--Sobic003G197200 Sobic001G405500--Sobic003G086600 Sobic001G405500--Sobic003G148600 Sobic001G405500--Sobic003G394400 Sobic001G405500--Sobic001G108200 Sobic001G405500--Sobic007G026600 Sobic003G144700 Sobic003G144700 Sobic001G405500--Sobic003G144700 Sobic001G405500--Sobic003G355100 Sobic001G405500--Sobic003G382800 Sobic001G405500--Sobic006G267200
Octagon: transcription factors


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