Gene annotation
Transcriptome id Sobic.010G110901.2,Sobic.010G110901.1
Synonym -
Functional annotation -
UniProt A0A1W0VSE5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G136600 expressed protein -
2 Sobic.004G170500 histone H3, putative, expressed K11253: histone H3
3 Sobic.005G142500 plant protein of unknown function domain containing protein, expressed -
4 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
5 Sobic.007G024500 zinc finger family protein, putative, expressed -
6 Sobic.003G347900 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
7 Sobic.010G047100 histone H3, putative, expressed K11253: histone H3
8 Sobic.002G092600 harpin-induced protein 1 domain containing protein, expressed -
9 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
10 Sobic.003G307400 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
11 Sobic.004G345500 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
12 Sobic.004G170800 serine-aspartate repeat-containing protein I precursor, putative, expressed -
13 Sobic.010G076400 40S ribosomal protein S17, putative, expressed K02962: RP-S17e, small subunit ribosomal protein S17e
14 Sobic.003G011100 reticulon domain containing protein, putative, expressed -
15 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
16 Sobic.003G250700 fasciclin domain containing protein, expressed -
17 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
18 Sobic.001G162800 expressed protein -
19 Sobic.007G192300 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.006G201500 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e


Gene co-expression network
sample Sobic010G110901 Sobic010G110901 Sobic002G136600 Sobic002G136600 Sobic010G110901--Sobic002G136600 Sobic004G170500 Sobic004G170500 Sobic010G110901--Sobic004G170500 Sobic005G142500 Sobic005G142500 Sobic010G110901--Sobic005G142500 Sobic001G107200 Sobic001G107200 Sobic010G110901--Sobic001G107200 Sobic007G024500 Sobic007G024500 Sobic010G110901--Sobic007G024500 Sobic003G347900 Sobic003G347900 Sobic010G110901--Sobic003G347900 Sobic010G047100 Sobic010G047100 Sobic010G110901--Sobic010G047100 Sobic002G092600 Sobic002G092600 Sobic010G110901--Sobic002G092600 Sobic001G475500 Sobic001G475500 Sobic010G110901--Sobic001G475500 Sobic002G074200 Sobic002G074200 Sobic002G136600--Sobic002G074200 Sobic003G375100 Sobic003G375100 Sobic002G136600--Sobic003G375100 Sobic002G136600--Sobic004G170500 Sobic004G252100 Sobic004G252100 Sobic002G136600--Sobic004G252100 Sobic001G529400 Sobic001G529400 Sobic002G136600--Sobic001G529400 Sobic003G125332 Sobic003G125332 Sobic002G136600--Sobic003G125332 Sobic003G276500 Sobic003G276500 Sobic002G136600--Sobic003G276500 Sobic007G195800 Sobic007G195800 Sobic002G136600--Sobic007G195800 Sobic010G101100 Sobic010G101100 Sobic002G136600--Sobic010G101100 Sobic006G076400 Sobic006G076400 Sobic004G170500--Sobic006G076400 Sobic003G057100 Sobic003G057100 Sobic004G170500--Sobic003G057100 Sobic006G134900 Sobic006G134900 Sobic004G170500--Sobic006G134900 Sobic001G078600 Sobic001G078600 Sobic004G170500--Sobic001G078600 Sobic004G279601 Sobic004G279601 Sobic004G170500--Sobic004G279601 Sobic004G170500--Sobic003G347900 Sobic006G081800 Sobic006G081800 Sobic004G170500--Sobic006G081800 Sobic004G170500--Sobic002G136600 Sobic001G205000 Sobic001G205000 Sobic004G170500--Sobic001G205000 Sobic004G170800 Sobic004G170800 Sobic005G142500--Sobic004G170800 Sobic004G050700 Sobic004G050700 Sobic005G142500--Sobic004G050700 Sobic001G264300 Sobic001G264300 Sobic005G142500--Sobic001G264300 Sobic001G264400 Sobic001G264400 Sobic005G142500--Sobic001G264400 Sobic003G427700 Sobic003G427700 Sobic005G142500--Sobic003G427700 Sobic005G051600 Sobic005G051600 Sobic005G142500--Sobic005G051600 Sobic002G247800 Sobic002G247800 Sobic005G142500--Sobic002G247800 Sobic009G221800 Sobic009G221800 Sobic005G142500--Sobic009G221800 Sobic009G130300 Sobic009G130300 Sobic005G142500--Sobic009G130300 Sobic001G528600 Sobic001G528600 Sobic001G107200--Sobic001G528600 Sobic006G191700 Sobic006G191700 Sobic001G107200--Sobic006G191700 Sobic001G107100 Sobic001G107100 Sobic001G107200--Sobic001G107100 Sobic002G350400 Sobic002G350400 Sobic001G107200--Sobic002G350400 Sobic005G047100 Sobic005G047100 Sobic001G107200--Sobic005G047100 Sobic007G094400 Sobic007G094400 Sobic001G107200--Sobic007G094400 Sobic003G250700 Sobic003G250700 Sobic001G107200--Sobic003G250700 Sobic003G011100 Sobic003G011100 Sobic001G107200--Sobic003G011100 Sobic006G278100 Sobic006G278100 Sobic001G107200--Sobic006G278100 Sobic007G024500--Sobic002G136600 Sobic007G024500--Sobic010G110901 Sobic007G024500--Sobic001G107200 Sobic001G363000 Sobic001G363000 Sobic007G024500--Sobic001G363000 Sobic009G165500 Sobic009G165500 Sobic007G024500--Sobic009G165500 Sobic007G024500--Sobic001G528600 Sobic006G190600 Sobic006G190600 Sobic007G024500--Sobic006G190600 Sobic007G024500--Sobic003G125332 Sobic007G024500--Sobic003G276500 Sobic006G057200 Sobic006G057200 Sobic003G347900--Sobic006G057200 Sobic007G198000 Sobic007G198000 Sobic003G347900--Sobic007G198000 Sobic001G313200 Sobic001G313200 Sobic003G347900--Sobic001G313200 Sobic003G347900--Sobic001G529400 Sobic006G191800 Sobic006G191800 Sobic003G347900--Sobic006G191800 Sobic002G276000 Sobic002G276000 Sobic003G347900--Sobic002G276000 Sobic003G347900--Sobic010G047100 Sobic003G078200 Sobic003G078200 Sobic003G347900--Sobic003G078200 Sobic003G347900--Sobic003G057100 Sobic010G047100--Sobic001G313200 Sobic010G047100--Sobic001G529400 Sobic004G041900 Sobic004G041900 Sobic010G047100--Sobic004G041900 Sobic010G047100--Sobic006G191800 Sobic010G221300 Sobic010G221300 Sobic010G047100--Sobic010G221300 Sobic001G031700 Sobic001G031700 Sobic010G047100--Sobic001G031700 Sobic003G160700 Sobic003G160700 Sobic010G047100--Sobic003G160700 Sobic003G322532 Sobic003G322532 Sobic010G047100--Sobic003G322532 Sobic003G125650 Sobic003G125650 Sobic010G047100--Sobic003G125650 Sobic004G297900 Sobic004G297900 Sobic002G092600--Sobic004G297900 Sobic006G235200 Sobic006G235200 Sobic002G092600--Sobic006G235200 Sobic008G009400 Sobic008G009400 Sobic002G092600--Sobic008G009400 Sobic003G299300 Sobic003G299300 Sobic002G092600--Sobic003G299300 Sobic001G300500 Sobic001G300500 Sobic002G092600--Sobic001G300500 Sobic004G295100 Sobic004G295100 Sobic002G092600--Sobic004G295100 Sobic009G109000 Sobic009G109000 Sobic002G092600--Sobic009G109000 Sobic010G085800 Sobic010G085800 Sobic002G092600--Sobic010G085800 SobicK026900 SobicK026900 Sobic002G092600--SobicK026900 Sobic001G502900 Sobic001G502900 Sobic001G475500--Sobic001G502900 Sobic001G475500--Sobic003G160700 Sobic003G122200 Sobic003G122200 Sobic001G475500--Sobic003G122200 Sobic005G113300 Sobic005G113300 Sobic001G475500--Sobic005G113300 Sobic007G150800 Sobic007G150800 Sobic001G475500--Sobic007G150800 Sobic009G173500 Sobic009G173500 Sobic001G475500--Sobic009G173500 Sobic001G361600 Sobic001G361600 Sobic001G475500--Sobic001G361600 Sobic004G220000 Sobic004G220000 Sobic001G475500--Sobic004G220000 Sobic003G117500 Sobic003G117500 Sobic001G475500--Sobic003G117500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.