Gene annotation
Transcriptome id Sobic.002G092600.3
Synonym NHL3
Functional annotation harpin-induced protein 1 domain containing protein, expressed
UniProt A0A1W0W306
Pfam PF03168
Panther DB PTHR31415 PTHR31415:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35980 : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RAP-DB (Rice) LOC_Os07g14660.1 : harpin-induced protein 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a045522
Brachypodium KQJ87641 , KQK20235 , KQK20234
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.006G235200 expressed protein -
3 Sobic.008G009400 - -
4 Sobic.003G299300 expressed protein -
5 Sobic.001G300500 expansin precursor, putative, expressed -
6 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
7 Sobic.009G109000 expressed protein -
8 Sobic.010G085800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
11 Sobic.001G059700 LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.003G411200 CRAL/TRIO domain containing protein, expressed -
14 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.007G090469 - -
16 Sobic.006G260200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
17 Sobic.006G172550 - -
18 Sobic.006G157900 C2 domain containing protein, putative, expressed -
19 Sobic.002G351300 expressed protein -
20 Sobic.004G292900 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic002G092600 Sobic002G092600 Sobic004G297900 Sobic004G297900 Sobic002G092600--Sobic004G297900 Sobic006G235200 Sobic006G235200 Sobic002G092600--Sobic006G235200 Sobic008G009400 Sobic008G009400 Sobic002G092600--Sobic008G009400 Sobic003G299300 Sobic003G299300 Sobic002G092600--Sobic003G299300 Sobic001G300500 Sobic001G300500 Sobic002G092600--Sobic001G300500 Sobic004G295100 Sobic004G295100 Sobic002G092600--Sobic004G295100 Sobic009G109000 Sobic009G109000 Sobic002G092600--Sobic009G109000 Sobic010G085800 Sobic010G085800 Sobic002G092600--Sobic010G085800 SobicK026900 SobicK026900 Sobic002G092600--SobicK026900 Sobic003G311800 Sobic003G311800 Sobic004G297900--Sobic003G311800 Sobic004G297900--Sobic008G009400 Sobic004G297900--Sobic006G235200 Sobic001G238300 Sobic001G238300 Sobic004G297900--Sobic001G238300 Sobic004G297900--Sobic004G295100 Sobic004G297900--Sobic001G300500 Sobic004G297900--Sobic009G109000 Sobic002G261500 Sobic002G261500 Sobic004G297900--Sobic002G261500 Sobic004G297900--SobicK026900 Sobic006G235200--Sobic004G297900 Sobic006G235200--Sobic004G295100 Sobic006G235200--Sobic008G009400 Sobic006G235200--Sobic001G300500 Sobic006G235200--Sobic003G311800 Sobic006G235200--Sobic003G299300 Sobic006G172550 Sobic006G172550 Sobic006G235200--Sobic006G172550 Sobic002G183700 Sobic002G183700 Sobic006G235200--Sobic002G183700 Sobic006G235200--Sobic002G092600 Sobic008G009400--Sobic004G297900 Sobic008G009400--Sobic004G295100 Sobic002G351300 Sobic002G351300 Sobic008G009400--Sobic002G351300 Sobic008G009400--Sobic003G299300 Sobic010G270700 Sobic010G270700 Sobic008G009400--Sobic010G270700 Sobic004G141100 Sobic004G141100 Sobic008G009400--Sobic004G141100 Sobic009G188000 Sobic009G188000 Sobic008G009400--Sobic009G188000 Sobic008G009400--Sobic006G235200 Sobic001G330300 Sobic001G330300 Sobic008G009400--Sobic001G330300 Sobic003G007600 Sobic003G007600 Sobic003G299300--Sobic003G007600 Sobic003G299300--Sobic008G009400 Sobic003G299300--Sobic001G330300 Sobic010G270500 Sobic010G270500 Sobic003G299300--Sobic010G270500 Sobic003G299300--Sobic009G188000 Sobic001G238400 Sobic001G238400 Sobic003G299300--Sobic001G238400 Sobic001G304100 Sobic001G304100 Sobic003G299300--Sobic001G304100 Sobic003G299300--Sobic004G295100 Sobic006G103000 Sobic006G103000 Sobic003G299300--Sobic006G103000 Sobic001G300500--Sobic004G297900 Sobic001G300500--Sobic003G311800 Sobic001G300500--Sobic004G295100 Sobic007G090469 Sobic007G090469 Sobic001G300500--Sobic007G090469 Sobic001G300500--Sobic006G172550 Sobic001G300500--Sobic006G235200 Sobic001G300500--Sobic001G238300 Sobic006G172601 Sobic006G172601 Sobic001G300500--Sobic006G172601 Sobic001G300500--SobicK026900 Sobic010G196000 Sobic010G196000 Sobic004G295100--Sobic010G196000 Sobic004G295100--Sobic004G297900 Sobic004G295100--Sobic008G009400 Sobic006G202600 Sobic006G202600 Sobic004G295100--Sobic006G202600 Sobic004G295100--Sobic001G330300 Sobic004G295100--Sobic003G311800 Sobic004G295100--Sobic006G235200 Sobic004G295100--Sobic001G300500 Sobic004G295100--Sobic007G090469 Sobic009G109000--Sobic003G311800 Sobic009G109000--Sobic004G297900 Sobic001G049900 Sobic001G049900 Sobic009G109000--Sobic001G049900 Sobic008G055100 Sobic008G055100 Sobic009G109000--Sobic008G055100 Sobic003G053400 Sobic003G053400 Sobic009G109000--Sobic003G053400 Sobic003G411200 Sobic003G411200 Sobic009G109000--Sobic003G411200 Sobic004G348800 Sobic004G348800 Sobic009G109000--Sobic004G348800 Sobic009G109000--Sobic008G009400 Sobic001G430100 Sobic001G430100 Sobic009G109000--Sobic001G430100 Sobic001G059700 Sobic001G059700 Sobic010G085800--Sobic001G059700 Sobic001G310300 Sobic001G310300 Sobic010G085800--Sobic001G310300 Sobic010G008400 Sobic010G008400 Sobic010G085800--Sobic010G008400 Sobic010G085800--Sobic009G109000 Sobic010G085800--Sobic004G297900 Sobic010G085800--Sobic008G009400 Sobic009G088900 Sobic009G088900 Sobic010G085800--Sobic009G088900 Sobic010G085800--Sobic003G311800 Sobic007G218800 Sobic007G218800 Sobic010G085800--Sobic007G218800 SobicK026900--Sobic004G297900 SobicK026900--Sobic007G090469 SobicK026900--Sobic001G238300 SobicK026900--Sobic006G202600 Sobic004G202400 Sobic004G202400 SobicK026900--Sobic004G202400 Sobic002G425000 Sobic002G425000 SobicK026900--Sobic002G425000 SobicK026900--Sobic010G270700 Sobic001G237900 Sobic001G237900 SobicK026900--Sobic001G237900 SobicK026900--Sobic004G295100
Octagon: transcription factors


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