Gene annotation
Transcriptome id Sobic.003G131100.2,Sobic.003G131100.1
Synonym SbDof14, DNA binding with One Finger, Sb03g011160, CDF2
Functional annotation Homologous to Dof genes in Arabidopsis and rice. (PubMedID : 21161392)
expressed protein
UniProt A0A1B6Q2W5 , C5XH96
Pfam PF02701
Panther DB PTHR31089 PTHR31089:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G39660 : cycling DOF factor 2
RAP-DB (Rice) LOC_Os01g17000.1 : expressed protein
MaizeGDB (Corn) Zm00025a024137
Brachypodium KQK03914
Barley -
Wheat TraesCS3D02G193100 , TraesCS3A02G189600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G283600 HVA22, putative, expressed -
2 Sobic.008G044600 expressed protein -
3 Sobic.001G369800 monocopper oxidase, putative, expressed -
4 Sobic.010G149600 intracellular protein transport protein USO1-related, putative, expressed -
5 Sobic.005G032600 glucan endo-1,3-beta-glucosidase-related, putative, expressed -
6 Sobic.002G074000 expressed protein -
7 Sobic.004G207000 fasciated ear2, putative, expressed -
8 Sobic.008G169400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed -
9 Sobic.001G079900 expressed protein -
10 Sobic.010G103500 ATMAP70 protein, putative, expressed -
11 Sobic.001G116600 inactive receptor kinase At2g26730 precursor, putative, expressed -
12 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
13 Sobic.001G289900 AT hook motif domain containing protein, expressed -
14 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
15 Sobic.002G260700 ARF GTPase-activating domain-containing protein, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
16 Sobic.001G290500 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
17 Sobic.002G430900 PWWP domain containing protein, expressed -
18 Sobic.001G212600 a_IG002N01.7, putative, expressed -
19 Sobic.007G125700 NHL repeat-containing protein, putative, expressed -
20 Sobic.003G345000 CAMK_CAMK_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic003G131100 Sobic003G131100 Sobic003G283600 Sobic003G283600 Sobic003G131100--Sobic003G283600 Sobic008G044600 Sobic008G044600 Sobic003G131100--Sobic008G044600 Sobic001G369800 Sobic001G369800 Sobic003G131100--Sobic001G369800 Sobic010G149600 Sobic010G149600 Sobic003G131100--Sobic010G149600 Sobic005G032600 Sobic005G032600 Sobic003G131100--Sobic005G032600 Sobic002G074000 Sobic002G074000 Sobic003G131100--Sobic002G074000 Sobic004G207000 Sobic004G207000 Sobic003G131100--Sobic004G207000 Sobic008G169400 Sobic008G169400 Sobic003G131100--Sobic008G169400 Sobic001G079900 Sobic001G079900 Sobic003G131100--Sobic001G079900 Sobic001G290500 Sobic001G290500 Sobic003G283600--Sobic001G290500 Sobic003G345000 Sobic003G345000 Sobic003G283600--Sobic003G345000 Sobic001G468500 Sobic001G468500 Sobic003G283600--Sobic001G468500 Sobic010G003300 Sobic010G003300 Sobic003G283600--Sobic010G003300 Sobic006G142500 Sobic006G142500 Sobic003G283600--Sobic006G142500 Sobic001G296100 Sobic001G296100 Sobic003G283600--Sobic001G296100 Sobic003G283600--Sobic001G369800 Sobic001G540700 Sobic001G540700 Sobic003G283600--Sobic001G540700 Sobic010G086000 Sobic010G086000 Sobic003G283600--Sobic010G086000 Sobic006G022400 Sobic006G022400 Sobic008G044600--Sobic006G022400 Sobic008G044600--Sobic004G207000 Sobic006G203400 Sobic006G203400 Sobic008G044600--Sobic006G203400 Sobic008G044600--Sobic003G131100 Sobic007G023100 Sobic007G023100 Sobic008G044600--Sobic007G023100 Sobic006G046600 Sobic006G046600 Sobic008G044600--Sobic006G046600 Sobic004G229100 Sobic004G229100 Sobic008G044600--Sobic004G229100 Sobic006G081500 Sobic006G081500 Sobic008G044600--Sobic006G081500 Sobic001G494100 Sobic001G494100 Sobic008G044600--Sobic001G494100 Sobic002G284100 Sobic002G284100 Sobic001G369800--Sobic002G284100 Sobic001G487200 Sobic001G487200 Sobic001G369800--Sobic001G487200 Sobic001G123100 Sobic001G123100 Sobic001G369800--Sobic001G123100 Sobic001G369800--Sobic001G540700 Sobic006G218900 Sobic006G218900 Sobic001G369800--Sobic006G218900 Sobic009G212100 Sobic009G212100 Sobic001G369800--Sobic009G212100 Sobic001G369800--Sobic003G283600 Sobic003G351900 Sobic003G351900 Sobic001G369800--Sobic003G351900 Sobic001G212600 Sobic001G212600 Sobic001G369800--Sobic001G212600 Sobic002G219900 Sobic002G219900 Sobic010G149600--Sobic002G219900 Sobic007G125700 Sobic007G125700 Sobic010G149600--Sobic007G125700 Sobic002G430900 Sobic002G430900 Sobic010G149600--Sobic002G430900 Sobic001G395200 Sobic001G395200 Sobic010G149600--Sobic001G395200 Sobic009G006900 Sobic009G006900 Sobic010G149600--Sobic009G006900 Sobic010G236200 Sobic010G236200 Sobic010G149600--Sobic010G236200 Sobic010G149600--Sobic005G032600 Sobic010G149600--Sobic004G207000 Sobic004G043750 Sobic004G043750 Sobic010G149600--Sobic004G043750 Sobic002G027600 Sobic002G027600 Sobic005G032600--Sobic002G027600 Sobic004G267600 Sobic004G267600 Sobic005G032600--Sobic004G267600 Sobic005G032600--Sobic001G079900 Sobic003G019900 Sobic003G019900 Sobic005G032600--Sobic003G019900 Sobic006G272800 Sobic006G272800 Sobic005G032600--Sobic006G272800 Sobic001G493900 Sobic001G493900 Sobic005G032600--Sobic001G493900 Sobic008G151600 Sobic008G151600 Sobic005G032600--Sobic008G151600 Sobic005G032600--Sobic003G351900 Sobic007G032100 Sobic007G032100 Sobic005G032600--Sobic007G032100 Sobic003G307200 Sobic003G307200 Sobic002G074000--Sobic003G307200 Sobic002G417000 Sobic002G417000 Sobic002G074000--Sobic002G417000 Sobic007G087800 Sobic007G087800 Sobic002G074000--Sobic007G087800 Sobic002G074000--Sobic004G267600 Sobic002G074000--Sobic001G493900 Sobic001G008300 Sobic001G008300 Sobic002G074000--Sobic001G008300 Sobic009G202801 Sobic009G202801 Sobic002G074000--Sobic009G202801 Sobic010G129700 Sobic010G129700 Sobic002G074000--Sobic010G129700 Sobic005G055600 Sobic005G055600 Sobic002G074000--Sobic005G055600 Sobic004G207000--Sobic006G022400 Sobic004G207000--Sobic001G540700 Sobic004G207000--Sobic007G125700 Sobic004G207000--Sobic009G006900 Sobic002G302600 Sobic002G302600 Sobic004G207000--Sobic002G302600 Sobic004G149400 Sobic004G149400 Sobic004G207000--Sobic004G149400 Sobic004G207000--Sobic005G032600 Sobic004G207000--Sobic010G149600 Sobic009G031500 Sobic009G031500 Sobic004G207000--Sobic009G031500 Sobic008G169400--Sobic001G079900 Sobic003G153900 Sobic003G153900 Sobic008G169400--Sobic003G153900 Sobic007G031300 Sobic007G031300 Sobic008G169400--Sobic007G031300 Sobic009G141700 Sobic009G141700 Sobic008G169400--Sobic009G141700 Sobic002G370400 Sobic002G370400 Sobic008G169400--Sobic002G370400 Sobic008G169400--Sobic001G494100 Sobic002G293700 Sobic002G293700 Sobic008G169400--Sobic002G293700 Sobic009G158900 Sobic009G158900 Sobic008G169400--Sobic009G158900 Sobic003G397100 Sobic003G397100 Sobic008G169400--Sobic003G397100 Sobic001G079900--Sobic005G032600 Sobic001G384700 Sobic001G384700 Sobic001G079900--Sobic001G384700 Sobic005G062600 Sobic005G062600 Sobic001G079900--Sobic005G062600 Sobic002G050700 Sobic002G050700 Sobic001G079900--Sobic002G050700 Sobic001G079900--Sobic003G351900 Sobic001G079900--Sobic001G493900 Sobic001G079900--Sobic008G151600 Sobic001G079900--Sobic002G027600 Sobic001G079900--Sobic009G141700
Octagon: transcription factors


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