Gene annotation
Transcriptome id Sobic.003G092500.3,Sobic.003G092500.1,Sobic.003G092500.4,Sobic.003G092500.5
Synonym Sb03g007730
Functional annotation seven in absentia protein family protein, expressed
UniProt A0A1B6Q267 , A0A1W0VWH8 , A0A1B6Q274
Pfam PF03145
Panther DB PTHR10315 PTHR10315:SF35
NCBI CDD -
KEGG Orthology K04506; E3 ubiquitin-protein ligase SIAH1
Gene Ontology GO:0007275; multicellular organism development GO:0006511ubiquitin-dependent protein catabolic process GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT5G37890 : Protein with RING/U-box and TRAF-like domains
RAP-DB (Rice) LOC_Os01g03170.1 : seven in absentia protein family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G092500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G092066 - -
2 Sobic.007G118050 - -
3 Sobic.010G237650 - -
4 Sobic.002G106200 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
5 Sobic.003G066700 OsFBX164 - F-box domain containing protein, expressed -
6 Sobic.007G118075 - -
7 Sobic.006G022500 OsFBD9 - F-box and FBD domain containing protein, expressed -
8 Sobic.007G127950 - -
9 Sobic.006G181500 RNA recognition motif containing protein, putative, expressed K03248: translation initiation factor 3 subunit G
10 Sobic.009G054400 ECT protein, putative, expressed -
11 Sobic.005G216800 RNA recognition motif containing protein, expressed -
12 Sobic.002G289000 expressed protein -
13 Sobic.003G356300 cadmium tolerance factor, putative, expressed -
14 Sobic.003G397100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
15 Sobic.001G488600 bHLH family protein, putative, expressed -
16 Sobic.004G233600 expressed protein -
17 Sobic.003G091200 seven in absentia protein family domain containing protein, expressed -
18 Sobic.005G022300 - -
19 Sobic.008G112100 Phospholipid synthesis protein 1 PLS1 (Zm)(PubMedID : 27208977)@acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase
20 Sobic.008G044600 expressed protein -


Gene co-expression network
sample Sobic003G092500 Sobic003G092500 Sobic003G092066 Sobic003G092066 Sobic003G092500--Sobic003G092066 Sobic007G118050 Sobic007G118050 Sobic003G092500--Sobic007G118050 Sobic010G237650 Sobic010G237650 Sobic003G092500--Sobic010G237650 Sobic002G106200 Sobic002G106200 Sobic003G092500--Sobic002G106200 Sobic003G066700 Sobic003G066700 Sobic003G092500--Sobic003G066700 Sobic007G118075 Sobic007G118075 Sobic003G092500--Sobic007G118075 Sobic006G022500 Sobic006G022500 Sobic003G092500--Sobic006G022500 Sobic007G127950 Sobic007G127950 Sobic003G092500--Sobic007G127950 Sobic006G181500 Sobic006G181500 Sobic003G092500--Sobic006G181500 Sobic003G092066--Sobic010G237650 Sobic009G129600 Sobic009G129600 Sobic003G092066--Sobic009G129600 Sobic003G092033 Sobic003G092033 Sobic003G092066--Sobic003G092033 Sobic003G092066--Sobic003G092500 Sobic006G144000 Sobic006G144000 Sobic003G092066--Sobic006G144000 Sobic002G268900 Sobic002G268900 Sobic003G092066--Sobic002G268900 Sobic002G147100 Sobic002G147100 Sobic003G092066--Sobic002G147100 Sobic002G033600 Sobic002G033600 Sobic003G092066--Sobic002G033600 Sobic009G000400 Sobic009G000400 Sobic003G092066--Sobic009G000400 Sobic007G118050--Sobic007G118075 Sobic009G054400 Sobic009G054400 Sobic007G118050--Sobic009G054400 Sobic002G108100 Sobic002G108100 Sobic007G118050--Sobic002G108100 Sobic001G433600 Sobic001G433600 Sobic007G118050--Sobic001G433600 Sobic004G353300 Sobic004G353300 Sobic007G118050--Sobic004G353300 Sobic003G285700 Sobic003G285700 Sobic007G118050--Sobic003G285700 Sobic005G123400 Sobic005G123400 Sobic007G118050--Sobic005G123400 Sobic003G091600 Sobic003G091600 Sobic007G118050--Sobic003G091600 Sobic003G200000 Sobic003G200000 Sobic007G118050--Sobic003G200000 Sobic010G237650--Sobic002G033600 Sobic010G237650--Sobic003G092066 Sobic010G237650--Sobic002G268900 Sobic010G237650--Sobic006G144000 Sobic007G139400 Sobic007G139400 Sobic010G237650--Sobic007G139400 Sobic006G215100 Sobic006G215100 Sobic010G237650--Sobic006G215100 Sobic010G073600 Sobic010G073600 Sobic010G237650--Sobic010G073600 Sobic005G128000 Sobic005G128000 Sobic010G237650--Sobic005G128000 Sobic009G102000 Sobic009G102000 Sobic010G237650--Sobic009G102000 Sobic007G048900 Sobic007G048900 Sobic002G106200--Sobic007G048900 Sobic006G215800 Sobic006G215800 Sobic002G106200--Sobic006G215800 Sobic003G342500 Sobic003G342500 Sobic002G106200--Sobic003G342500 Sobic007G060100 Sobic007G060100 Sobic002G106200--Sobic007G060100 Sobic001G152700 Sobic001G152700 Sobic002G106200--Sobic001G152700 Sobic002G106200--Sobic006G181500 Sobic002G106200--Sobic002G108100 Sobic010G160300 Sobic010G160300 Sobic002G106200--Sobic010G160300 Sobic002G057400 Sobic002G057400 Sobic002G106200--Sobic002G057400 Sobic005G125000 Sobic005G125000 Sobic003G066700--Sobic005G125000 Sobic003G066700--Sobic003G092500 Sobic001G043500 Sobic001G043500 Sobic003G066700--Sobic001G043500 Sobic001G186600 Sobic001G186600 Sobic003G066700--Sobic001G186600 Sobic007G116000 Sobic007G116000 Sobic003G066700--Sobic007G116000 Sobic009G141700 Sobic009G141700 Sobic003G066700--Sobic009G141700 Sobic010G276600 Sobic010G276600 Sobic003G066700--Sobic010G276600 Sobic002G205000 Sobic002G205000 Sobic003G066700--Sobic002G205000 Sobic004G233600 Sobic004G233600 Sobic003G066700--Sobic004G233600 Sobic007G118075--Sobic007G118050 Sobic007G118075--Sobic002G108100 Sobic007G118075--Sobic005G123400 Sobic001G340900 Sobic001G340900 Sobic007G118075--Sobic001G340900 Sobic006G237500 Sobic006G237500 Sobic007G118075--Sobic006G237500 Sobic007G118075--Sobic004G353300 Sobic007G118075--Sobic001G433600 Sobic007G118075--Sobic010G237650 Sobic002G147200 Sobic002G147200 Sobic007G118075--Sobic002G147200 Sobic004G227500 Sobic004G227500 Sobic006G022500--Sobic004G227500 Sobic004G148600 Sobic004G148600 Sobic006G022500--Sobic004G148600 Sobic001G384600 Sobic001G384600 Sobic006G022500--Sobic001G384600 Sobic002G073300 Sobic002G073300 Sobic006G022500--Sobic002G073300 Sobic002G060450 Sobic002G060450 Sobic006G022500--Sobic002G060450 Sobic004G189700 Sobic004G189700 Sobic006G022500--Sobic004G189700 Sobic001G045700 Sobic001G045700 Sobic006G022500--Sobic001G045700 Sobic006G022400 Sobic006G022400 Sobic006G022500--Sobic006G022400 Sobic005G177900 Sobic005G177900 Sobic006G022500--Sobic005G177900 Sobic001G534400 Sobic001G534400 Sobic007G127950--Sobic001G534400 Sobic003G091200 Sobic003G091200 Sobic007G127950--Sobic003G091200 Sobic008G112100 Sobic008G112100 Sobic007G127950--Sobic008G112100 Sobic003G411700 Sobic003G411700 Sobic007G127950--Sobic003G411700 Sobic003G343200 Sobic003G343200 Sobic007G127950--Sobic003G343200 Sobic001G500500 Sobic001G500500 Sobic007G127950--Sobic001G500500 Sobic002G271400 Sobic002G271400 Sobic007G127950--Sobic002G271400 Sobic001G242300 Sobic001G242300 Sobic007G127950--Sobic001G242300 Sobic001G211500 Sobic001G211500 Sobic007G127950--Sobic001G211500 Sobic006G181500--Sobic002G106200 Sobic006G181500--Sobic002G108100 Sobic006G181500--Sobic006G215800 Sobic003G270100 Sobic003G270100 Sobic006G181500--Sobic003G270100 Sobic010G090700 Sobic010G090700 Sobic006G181500--Sobic010G090700 Sobic008G098700 Sobic008G098700 Sobic006G181500--Sobic008G098700 Sobic006G181500--Sobic007G048900 Sobic001G203800 Sobic001G203800 Sobic006G181500--Sobic001G203800 Sobic006G181500--Sobic001G500500
Octagon: transcription factors


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