Gene annotation
Transcriptome id Sobic.004G233600.2,Sobic.004G233600.1
Synonym Sb04g027690
Functional annotation expressed protein
UniProt C5XYP4
Pfam -
Panther DB PTHR33924 PTHR33924:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G65120 : -
RAP-DB (Rice) LOC_Os02g51640.1 : expressed protein
MaizeGDB (Corn) Zm00025a033172
Brachypodium -
Barley HORVU0Hr1G017100.9 , HORVU0Hr1G017100.8 , HORVU0Hr1G017100.3 , HORVU0Hr1G017100.2 , HORVU0Hr1G017100.1 , HORVU0Hr1G017100.7 , HORVU0Hr1G017100.6 , HORVU0Hr1G017100.5 , HORVU0Hr1G017100.4
Wheat TraesCS6D02G281500 , TraesCS6D02G281500 , TraesCS6B02G331200 , TraesCS6B02G331200 , TraesCS6A02G302100 , TraesCS6A02G302100 , TraesCS6A02G302100
Populus -


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cDNA sequences
Sobic.004G233600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G033600 Leucine Rich Repeat family protein, expressed -
2 Sobic.010G237650 - -
3 Sobic.002G268900 flap endonuclease, putative, expressed K15338: GEN1, flap endonuclease GEN
4 Sobic.007G031300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
5 Sobic.007G139400 OsFBL33 - F-box domain and LRR containing protein, expressed -
6 Sobic.006G091000 hydrolase, alpha/beta fold family domain containing protein, expressed K13617: protein phosphatase methylesterase 1
7 Sobic.009G108400 CAAX amino terminal protease family protein, putative, expressed K08658: RCE1, prenyl protein peptidase
8 Sobic.004G347100 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
9 Sobic.001G448100 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
10 Sobic.007G053400 nuclear matrix protein 1, putative, expressed -
11 Sobic.003G323300 expressed protein -
12 Sobic.010G046400 glyoxalase/bleomycin resistance protein/dioxygenase, putative, expressed -
13 Sobic.009G011500 expressed protein -
14 Sobic.002G430900 PWWP domain containing protein, expressed -
15 Sobic.004G241600 MAGE-8 antigen-related, putative, expressed -
16 Sobic.003G066700 OsFBX164 - F-box domain containing protein, expressed -
17 Sobic.005G120700 ThiF family domain containing protein, putative, expressed K10684: UBLE1A, ubiquitin-like 1-activating enzyme E1 A
18 Sobic.004G227500 WD-40 repeat family protein, putative, expressed -
19 Sobic.002G070000 OsFBX230 - F-box domain containing protein, expressed -
20 Sobic.003G205100 helicase, putative, expressed K11136: regulator of telomere elongation helicase 1


Gene co-expression network
sample Sobic004G233600 Sobic004G233600 Sobic002G033600 Sobic002G033600 Sobic004G233600--Sobic002G033600 Sobic010G237650 Sobic010G237650 Sobic004G233600--Sobic010G237650 Sobic002G268900 Sobic002G268900 Sobic004G233600--Sobic002G268900 Sobic007G031300 Sobic007G031300 Sobic004G233600--Sobic007G031300 Sobic007G139400 Sobic007G139400 Sobic004G233600--Sobic007G139400 Sobic006G091000 Sobic006G091000 Sobic004G233600--Sobic006G091000 Sobic009G108400 Sobic009G108400 Sobic004G233600--Sobic009G108400 Sobic004G347100 Sobic004G347100 Sobic004G233600--Sobic004G347100 Sobic001G448100 Sobic001G448100 Sobic004G233600--Sobic001G448100 Sobic002G033600--Sobic010G237650 Sobic002G033600--Sobic007G139400 Sobic002G033600--Sobic002G268900 Sobic001G049600 Sobic001G049600 Sobic002G033600--Sobic001G049600 Sobic002G061400 Sobic002G061400 Sobic002G033600--Sobic002G061400 Sobic007G188900 Sobic007G188900 Sobic002G033600--Sobic007G188900 Sobic010G199800 Sobic010G199800 Sobic002G033600--Sobic010G199800 Sobic009G102000 Sobic009G102000 Sobic002G033600--Sobic009G102000 Sobic002G334600 Sobic002G334600 Sobic002G033600--Sobic002G334600 Sobic010G237650--Sobic002G033600 Sobic003G092066 Sobic003G092066 Sobic010G237650--Sobic003G092066 Sobic010G237650--Sobic002G268900 Sobic006G144000 Sobic006G144000 Sobic010G237650--Sobic006G144000 Sobic010G237650--Sobic007G139400 Sobic006G215100 Sobic006G215100 Sobic010G237650--Sobic006G215100 Sobic010G073600 Sobic010G073600 Sobic010G237650--Sobic010G073600 Sobic005G128000 Sobic005G128000 Sobic010G237650--Sobic005G128000 Sobic010G237650--Sobic009G102000 Sobic002G268900--Sobic002G033600 Sobic001G522400 Sobic001G522400 Sobic002G268900--Sobic001G522400 Sobic002G268900--Sobic010G237650 Sobic004G085300 Sobic004G085300 Sobic002G268900--Sobic004G085300 Sobic009G129600 Sobic009G129600 Sobic002G268900--Sobic009G129600 Sobic002G268900--Sobic004G347100 Sobic002G268900--Sobic007G139400 Sobic003G343600 Sobic003G343600 Sobic002G268900--Sobic003G343600 Sobic001G346700 Sobic001G346700 Sobic002G268900--Sobic001G346700 Sobic008G169400 Sobic008G169400 Sobic007G031300--Sobic008G169400 Sobic001G211500 Sobic001G211500 Sobic007G031300--Sobic001G211500 Sobic004G129500 Sobic004G129500 Sobic007G031300--Sobic004G129500 Sobic001G296800 Sobic001G296800 Sobic007G031300--Sobic001G296800 Sobic002G430900 Sobic002G430900 Sobic007G031300--Sobic002G430900 Sobic003G028400 Sobic003G028400 Sobic007G031300--Sobic003G028400 Sobic001G210000 Sobic001G210000 Sobic007G031300--Sobic001G210000 Sobic003G153900 Sobic003G153900 Sobic007G031300--Sobic003G153900 Sobic003G212600 Sobic003G212600 Sobic007G031300--Sobic003G212600 Sobic007G139400--Sobic004G347100 Sobic007G139400--Sobic002G033600 Sobic007G139400--Sobic007G188900 Sobic009G040800 Sobic009G040800 Sobic007G139400--Sobic009G040800 Sobic007G088900 Sobic007G088900 Sobic007G139400--Sobic007G088900 Sobic005G040900 Sobic005G040900 Sobic007G139400--Sobic005G040900 Sobic007G139400--Sobic002G334600 Sobic007G139400--Sobic009G129600 Sobic003G354100 Sobic003G354100 Sobic007G139400--Sobic003G354100 Sobic006G091000--Sobic009G040800 Sobic005G178950 Sobic005G178950 Sobic006G091000--Sobic005G178950 Sobic004G353400 Sobic004G353400 Sobic006G091000--Sobic004G353400 Sobic006G091000--Sobic005G040900 Sobic006G091000--Sobic004G347100 Sobic010G074900 Sobic010G074900 Sobic006G091000--Sobic010G074900 Sobic006G091000--Sobic007G139400 Sobic010G172400 Sobic010G172400 Sobic006G091000--Sobic010G172400 Sobic005G114400 Sobic005G114400 Sobic006G091000--Sobic005G114400 Sobic009G108400--Sobic009G040800 Sobic001G335900 Sobic001G335900 Sobic009G108400--Sobic001G335900 Sobic009G154900 Sobic009G154900 Sobic009G108400--Sobic009G154900 Sobic001G012900 Sobic001G012900 Sobic009G108400--Sobic001G012900 Sobic001G247200 Sobic001G247200 Sobic009G108400--Sobic001G247200 Sobic009G108400--Sobic006G091000 Sobic003G205100 Sobic003G205100 Sobic009G108400--Sobic003G205100 Sobic004G007900 Sobic004G007900 Sobic009G108400--Sobic004G007900 Sobic009G108400--Sobic010G172400 Sobic004G347100--Sobic007G139400 Sobic006G248500 Sobic006G248500 Sobic004G347100--Sobic006G248500 Sobic004G347100--Sobic006G091000 Sobic009G044900 Sobic009G044900 Sobic004G347100--Sobic009G044900 Sobic004G347100--Sobic005G040900 Sobic004G347100--Sobic009G129600 Sobic009G151200 Sobic009G151200 Sobic004G347100--Sobic009G151200 Sobic004G347100--Sobic009G040800 Sobic003G336800 Sobic003G336800 Sobic004G347100--Sobic003G336800 Sobic002G079100 Sobic002G079100 Sobic001G448100--Sobic002G079100 Sobic003G397100 Sobic003G397100 Sobic001G448100--Sobic003G397100 Sobic001G448100--Sobic004G007900 Sobic002G235900 Sobic002G235900 Sobic001G448100--Sobic002G235900 Sobic002G380100 Sobic002G380100 Sobic001G448100--Sobic002G380100 Sobic001G448100--Sobic009G154900 Sobic001G448100--Sobic001G522400 Sobic009G000400 Sobic009G000400 Sobic001G448100--Sobic009G000400 Sobic003G067201 Sobic003G067201 Sobic001G448100--Sobic003G067201
Octagon: transcription factors


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