Gene annotation
Transcriptome id Sobic.002G070000.4,Sobic.002G070000.3,Sobic.002G070000.2
Synonym Sb02g005880
Functional annotation OsFBX230 - F-box domain containing protein, expressed
UniProt A0A1B6Q9M1
Pfam PF08268 PF00646
Panther DB PTHR32133 PTHR32133:SF143
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G53550 : F-box family protein
RAP-DB (Rice) LOC_Os07g13890.1 : OsFBX230 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G024900 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
2 Sobic.009G011500 expressed protein -
3 Sobic.008G169400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed -
4 Sobic.009G158900 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.001G448100 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
6 Sobic.002G367300 "qGW7/GL7(Ortholog in rice:Wang et al., 2015a(PubMedID : 31659862)@expressed protein -
7 Sobic.010G046400 glyoxalase/bleomycin resistance protein/dioxygenase, putative, expressed -
8 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
9 Sobic.005G204100 kelch repeat protein, putative, expressed -
10 Sobic.001G065300 GRF zinc finger family protein, expressed -
11 Sobic.004G227500 WD-40 repeat family protein, putative, expressed -
12 Sobic.001G494100 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
13 Sobic.006G027101 - -
14 Sobic.010G237650 - -
15 Sobic.005G216800 RNA recognition motif containing protein, expressed -
16 Sobic.004G199700 expressed protein -
17 Sobic.004G233600 expressed protein -
18 Sobic.003G336900 inactive receptor kinase At2g26730 precursor, putative, expressed -
19 Sobic.004G066100 OsFBX85 - F-box domain containing protein, expressed -
20 Sobic.004G144100 - -


Gene co-expression network
sample Sobic002G070000 Sobic002G070000 Sobic009G024900 Sobic009G024900 Sobic002G070000--Sobic009G024900 Sobic009G011500 Sobic009G011500 Sobic002G070000--Sobic009G011500 Sobic008G169400 Sobic008G169400 Sobic002G070000--Sobic008G169400 Sobic009G158900 Sobic009G158900 Sobic002G070000--Sobic009G158900 Sobic001G448100 Sobic001G448100 Sobic002G070000--Sobic001G448100 Sobic002G367300 Sobic002G367300 Sobic002G070000--Sobic002G367300 Sobic010G046400 Sobic010G046400 Sobic002G070000--Sobic010G046400 Sobic002G216600 Sobic002G216600 Sobic002G070000--Sobic002G216600 Sobic005G204100 Sobic005G204100 Sobic002G070000--Sobic005G204100 Sobic009G024900--Sobic009G158900 Sobic003G336900 Sobic003G336900 Sobic009G024900--Sobic003G336900 Sobic002G390800 Sobic002G390800 Sobic009G024900--Sobic002G390800 Sobic002G173400 Sobic002G173400 Sobic009G024900--Sobic002G173400 Sobic008G131900 Sobic008G131900 Sobic009G024900--Sobic008G131900 Sobic009G131200 Sobic009G131200 Sobic009G024900--Sobic009G131200 Sobic003G285700 Sobic003G285700 Sobic009G024900--Sobic003G285700 Sobic001G327100 Sobic001G327100 Sobic009G024900--Sobic001G327100 Sobic003G045000 Sobic003G045000 Sobic009G024900--Sobic003G045000 Sobic001G045700 Sobic001G045700 Sobic009G011500--Sobic001G045700 Sobic009G164900 Sobic009G164900 Sobic009G011500--Sobic009G164900 Sobic009G011500--Sobic002G367300 Sobic002G060450 Sobic002G060450 Sobic009G011500--Sobic002G060450 Sobic004G227500 Sobic004G227500 Sobic009G011500--Sobic004G227500 Sobic006G022500 Sobic006G022500 Sobic009G011500--Sobic006G022500 Sobic002G049000 Sobic002G049000 Sobic009G011500--Sobic002G049000 Sobic010G173900 Sobic010G173900 Sobic009G011500--Sobic010G173900 Sobic001G065300 Sobic001G065300 Sobic009G011500--Sobic001G065300 Sobic001G079900 Sobic001G079900 Sobic008G169400--Sobic001G079900 Sobic003G153900 Sobic003G153900 Sobic008G169400--Sobic003G153900 Sobic007G031300 Sobic007G031300 Sobic008G169400--Sobic007G031300 Sobic009G141700 Sobic009G141700 Sobic008G169400--Sobic009G141700 Sobic002G370400 Sobic002G370400 Sobic008G169400--Sobic002G370400 Sobic001G494100 Sobic001G494100 Sobic008G169400--Sobic001G494100 Sobic002G293700 Sobic002G293700 Sobic008G169400--Sobic002G293700 Sobic008G169400--Sobic009G158900 Sobic003G397100 Sobic003G397100 Sobic008G169400--Sobic003G397100 Sobic009G158900--Sobic003G336900 Sobic009G158900--Sobic009G024900 Sobic009G158900--Sobic002G390800 Sobic009G158900--Sobic008G169400 Sobic006G193100 Sobic006G193100 Sobic009G158900--Sobic006G193100 Sobic009G158900--Sobic002G173400 Sobic004G063600 Sobic004G063600 Sobic009G158900--Sobic004G063600 Sobic007G221700 Sobic007G221700 Sobic009G158900--Sobic007G221700 Sobic009G158900--Sobic001G079900 Sobic002G079100 Sobic002G079100 Sobic001G448100--Sobic002G079100 Sobic001G448100--Sobic003G397100 Sobic004G007900 Sobic004G007900 Sobic001G448100--Sobic004G007900 Sobic002G235900 Sobic002G235900 Sobic001G448100--Sobic002G235900 Sobic002G380100 Sobic002G380100 Sobic001G448100--Sobic002G380100 Sobic009G154900 Sobic009G154900 Sobic001G448100--Sobic009G154900 Sobic001G522400 Sobic001G522400 Sobic001G448100--Sobic001G522400 Sobic009G000400 Sobic009G000400 Sobic001G448100--Sobic009G000400 Sobic003G067201 Sobic003G067201 Sobic001G448100--Sobic003G067201 Sobic006G262600 Sobic006G262600 Sobic002G367300--Sobic006G262600 Sobic010G091700 Sobic010G091700 Sobic002G367300--Sobic010G091700 Sobic001G184400 Sobic001G184400 Sobic002G367300--Sobic001G184400 Sobic002G367300--Sobic009G011500 Sobic003G380500 Sobic003G380500 Sobic002G367300--Sobic003G380500 Sobic004G154600 Sobic004G154600 Sobic002G367300--Sobic004G154600 Sobic004G199700 Sobic004G199700 Sobic002G367300--Sobic004G199700 Sobic003G174900 Sobic003G174900 Sobic002G367300--Sobic003G174900 Sobic004G205500 Sobic004G205500 Sobic002G367300--Sobic004G205500 Sobic010G046400--Sobic010G173900 Sobic010G046400--Sobic004G227500 Sobic002G334600 Sobic002G334600 Sobic010G046400--Sobic002G334600 Sobic002G218700 Sobic002G218700 Sobic010G046400--Sobic002G218700 Sobic007G070300 Sobic007G070300 Sobic010G046400--Sobic007G070300 Sobic010G046400--Sobic002G367300 Sobic010G046400--Sobic009G011500 Sobic008G099500 Sobic008G099500 Sobic010G046400--Sobic008G099500 Sobic001G247200 Sobic001G247200 Sobic010G046400--Sobic001G247200 Sobic002G216600--Sobic005G204100 Sobic001G384700 Sobic001G384700 Sobic002G216600--Sobic001G384700 Sobic004G144100 Sobic004G144100 Sobic002G216600--Sobic004G144100 Sobic009G259500 Sobic009G259500 Sobic002G216600--Sobic009G259500 Sobic002G216600--Sobic004G199700 Sobic002G216600--Sobic001G079900 Sobic002G216600--Sobic009G141700 Sobic002G216600--Sobic003G174900 Sobic002G348700 Sobic002G348700 Sobic002G216600--Sobic002G348700 Sobic005G204100--Sobic002G216600 Sobic005G204100--Sobic009G259500 Sobic002G072700 Sobic002G072700 Sobic005G204100--Sobic002G072700 Sobic007G142900 Sobic007G142900 Sobic005G204100--Sobic007G142900 Sobic002G098500 Sobic002G098500 Sobic005G204100--Sobic002G098500 Sobic001G221900 Sobic001G221900 Sobic005G204100--Sobic001G221900 Sobic005G204100--Sobic001G384700 Sobic006G272500 Sobic006G272500 Sobic005G204100--Sobic006G272500 Sobic007G189400 Sobic007G189400 Sobic005G204100--Sobic007G189400
Octagon: transcription factors


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