Gene annotation
Transcriptome id Sobic.003G356300.1
Synonym Sb03g039860
Functional annotation cadmium tolerance factor, putative, expressed
UniProt A0A1B6Q703
Pfam PF13962
Panther DB PTHR24177 PTHR24177:SF51
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G11000 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os06g19110.1 : cadmium tolerance factor, putative, expressed
MaizeGDB (Corn) Zm00025a039649 , Zm00025a001870
Brachypodium KQJ95251 , KQJ95252 , PNT66715
Barley HORVU6Hr1G086570.2 , HORVU6Hr1G086570.3 , HORVU6Hr1G086570.1 , HORVU6Hr1G086570.6 , HORVU6Hr1G086570.4 , HORVU6Hr1G086570.5 , HORVU6Hr1G086440.14 , HORVU6Hr1G086440.15 , HORVU6Hr1G086440.16 , HORVU6Hr1G086440.17 , HORVU6Hr1G086440.10 , HORVU6Hr1G086440.11 , HORVU6Hr1G086440.12 , HORVU6Hr1G086440.13 , HORVU7Hr1G044100.1 , HORVU7Hr1G044100.4 , HORVU7Hr1G044100.5 , HORVU7Hr1G044100.6 , HORVU7Hr1G044100.7 , HORVU7Hr1G044100.8 , HORVU7Hr1G044100.9 , HORVU6Hr1G086440.8 , HORVU6Hr1G086440.9 , HORVU6Hr1G086440.6 , HORVU6Hr1G086440.7 , HORVU6Hr1G086440.4 , HORVU6Hr1G086440.5 , HORVU6Hr1G086440.2 , HORVU6Hr1G086440.3 , HORVU6Hr1G086440.1 , HORVU7Hr1G044100.12 , HORVU7Hr1G044100.10 , HORVU7Hr1G044100.11
Wheat TraesCS6D02G346600 , TraesCS6A02G363500 , TraesCS6A02G363100 , TraesCS6A02G363100 , TraesCS6D02G346900 , TraesCS6B02G396900 , TraesCS6B02G396700 , TraesCS6B02G397400 , TraesCS6D02G346300 , TraesCS6B02G398300 , TraesCS6B02G397300 , TraesCS7D02G147300 , TraesCS6D02G346500 , TraesCS6D02G346500 , TraesCS7A02G217400 , TraesCS6A02G363200 , TraesCS7D02G219000 , TraesCS7B02G048200 , TraesCS6B02G398100 , TraesCS5A02G042100 , TraesCS6B02G397900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G215000 PAZ domain-containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
2 Sobic.001G217300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@auxin response factor 18, putative, expressed -
3 Sobic.002G203500 protein binding protein, putative, expressed -
4 Sobic.005G166100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
5 Sobic.001G152600 RIO1 family protein, expressed -
6 Sobic.003G092500 seven in absentia protein family protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
7 Sobic.005G022300 - -
8 Sobic.001G340900 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.001G043500 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
10 Sobic.006G246001 - -
11 Sobic.001G137400 ankyrin, putative, expressed -
12 Sobic.003G207000 expressed protein -
13 Sobic.002G178700 ubiquitin fusion protein, putative, expressed -
14 Sobic.001G086400 OsMADS34 - MADS-box family gene with MIKCc type-box, expressed -
15 Sobic.001G138900 expressed protein -
16 Sobic.001G463301 - -
17 Sobic.001G382400 TKL_IRAK_CrRLK1L-1.5 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
18 Sobic.003G091300 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
19 Sobic.008G094800 OsFBX125 - F-box domain containing protein, expressed -
20 Sobic.003G191600 expressed protein -


Gene co-expression network
sample Sobic003G356300 Sobic003G356300 Sobic006G215000 Sobic006G215000 Sobic003G356300--Sobic006G215000 Sobic001G217300 Sobic001G217300 Sobic003G356300--Sobic001G217300 Sobic002G203500 Sobic002G203500 Sobic003G356300--Sobic002G203500 Sobic005G166100 Sobic005G166100 Sobic003G356300--Sobic005G166100 Sobic001G152600 Sobic001G152600 Sobic003G356300--Sobic001G152600 Sobic003G092500 Sobic003G092500 Sobic003G356300--Sobic003G092500 Sobic005G022300 Sobic005G022300 Sobic003G356300--Sobic005G022300 Sobic001G340900 Sobic001G340900 Sobic003G356300--Sobic001G340900 Sobic001G043500 Sobic001G043500 Sobic003G356300--Sobic001G043500 Sobic006G215000--Sobic003G356300 Sobic003G348200 Sobic003G348200 Sobic006G215000--Sobic003G348200 Sobic001G382400 Sobic001G382400 Sobic006G215000--Sobic001G382400 Sobic004G331900 Sobic004G331900 Sobic006G215000--Sobic004G331900 Sobic003G327600 Sobic003G327600 Sobic006G215000--Sobic003G327600 Sobic004G229000 Sobic004G229000 Sobic006G215000--Sobic004G229000 Sobic001G205900 Sobic001G205900 Sobic006G215000--Sobic001G205900 Sobic001G500500 Sobic001G500500 Sobic006G215000--Sobic001G500500 Sobic002G263000 Sobic002G263000 Sobic006G215000--Sobic002G263000 Sobic001G163300 Sobic001G163300 Sobic001G217300--Sobic001G163300 Sobic005G202000 Sobic005G202000 Sobic001G217300--Sobic005G202000 Sobic003G031500 Sobic003G031500 Sobic001G217300--Sobic003G031500 Sobic001G217300--Sobic001G152600 Sobic001G316900 Sobic001G316900 Sobic001G217300--Sobic001G316900 Sobic004G262600 Sobic004G262600 Sobic001G217300--Sobic004G262600 Sobic001G217300--Sobic003G356300 Sobic003G223900 Sobic003G223900 Sobic001G217300--Sobic003G223900 Sobic006G203400 Sobic006G203400 Sobic001G217300--Sobic006G203400 Sobic007G159200 Sobic007G159200 Sobic002G203500--Sobic007G159200 Sobic009G141700 Sobic009G141700 Sobic002G203500--Sobic009G141700 Sobic007G128100 Sobic007G128100 Sobic002G203500--Sobic007G128100 Sobic004G352100 Sobic004G352100 Sobic002G203500--Sobic004G352100 Sobic007G125700 Sobic007G125700 Sobic002G203500--Sobic007G125700 Sobic002G203500--Sobic001G043500 Sobic007G023100 Sobic007G023100 Sobic002G203500--Sobic007G023100 Sobic007G161600 Sobic007G161600 Sobic002G203500--Sobic007G161600 Sobic002G425200 Sobic002G425200 Sobic002G203500--Sobic002G425200 Sobic001G216400 Sobic001G216400 Sobic005G166100--Sobic001G216400 Sobic004G056000 Sobic004G056000 Sobic005G166100--Sobic004G056000 Sobic009G063700 Sobic009G063700 Sobic005G166100--Sobic009G063700 Sobic007G128200 Sobic007G128200 Sobic005G166100--Sobic007G128200 Sobic003G381100 Sobic003G381100 Sobic005G166100--Sobic003G381100 Sobic009G075500 Sobic009G075500 Sobic005G166100--Sobic009G075500 Sobic001G419500 Sobic001G419500 Sobic005G166100--Sobic001G419500 Sobic007G193300 Sobic007G193300 Sobic005G166100--Sobic007G193300 Sobic006G097300 Sobic006G097300 Sobic005G166100--Sobic006G097300 Sobic008G161100 Sobic008G161100 Sobic001G152600--Sobic008G161100 Sobic001G152600--Sobic001G163300 Sobic001G137400 Sobic001G137400 Sobic001G152600--Sobic001G137400 Sobic001G152600--Sobic005G202000 Sobic003G191600 Sobic003G191600 Sobic001G152600--Sobic003G191600 Sobic003G207000 Sobic003G207000 Sobic001G152600--Sobic003G207000 Sobic001G152600--Sobic001G217300 Sobic001G152600--Sobic005G166100 Sobic008G098700 Sobic008G098700 Sobic001G152600--Sobic008G098700 Sobic003G092066 Sobic003G092066 Sobic003G092500--Sobic003G092066 Sobic007G118050 Sobic007G118050 Sobic003G092500--Sobic007G118050 Sobic010G237650 Sobic010G237650 Sobic003G092500--Sobic010G237650 Sobic002G106200 Sobic002G106200 Sobic003G092500--Sobic002G106200 Sobic003G066700 Sobic003G066700 Sobic003G092500--Sobic003G066700 Sobic007G118075 Sobic007G118075 Sobic003G092500--Sobic007G118075 Sobic006G022500 Sobic006G022500 Sobic003G092500--Sobic006G022500 Sobic007G127950 Sobic007G127950 Sobic003G092500--Sobic007G127950 Sobic006G181500 Sobic006G181500 Sobic003G092500--Sobic006G181500 Sobic006G072900 Sobic006G072900 Sobic005G022300--Sobic006G072900 Sobic005G022300--Sobic002G203500 Sobic004G045566 Sobic004G045566 Sobic005G022300--Sobic004G045566 Sobic005G022300--Sobic006G022500 Sobic005G099200 Sobic005G099200 Sobic005G022300--Sobic005G099200 Sobic010G015000 Sobic010G015000 Sobic005G022300--Sobic010G015000 Sobic006G066000 Sobic006G066000 Sobic005G022300--Sobic006G066000 Sobic008G099500 Sobic008G099500 Sobic005G022300--Sobic008G099500 Sobic005G022300--Sobic003G356300 Sobic001G340900--Sobic007G118075 Sobic002G299200 Sobic002G299200 Sobic001G340900--Sobic002G299200 Sobic002G259301 Sobic002G259301 Sobic001G340900--Sobic002G259301 Sobic003G090000 Sobic003G090000 Sobic001G340900--Sobic003G090000 Sobic003G044000 Sobic003G044000 Sobic001G340900--Sobic003G044000 Sobic001G288000 Sobic001G288000 Sobic001G340900--Sobic001G288000 Sobic009G152120 Sobic009G152120 Sobic001G340900--Sobic009G152120 Sobic003G396500 Sobic003G396500 Sobic001G340900--Sobic003G396500 Sobic007G038250 Sobic007G038250 Sobic001G340900--Sobic007G038250 Sobic001G043500--Sobic007G161600 Sobic005G162900 Sobic005G162900 Sobic001G043500--Sobic005G162900 Sobic002G078900 Sobic002G078900 Sobic001G043500--Sobic002G078900 Sobic002G205000 Sobic002G205000 Sobic001G043500--Sobic002G205000 Sobic007G121700 Sobic007G121700 Sobic001G043500--Sobic007G121700 Sobic007G033700 Sobic007G033700 Sobic001G043500--Sobic007G033700 Sobic001G463301 Sobic001G463301 Sobic001G043500--Sobic001G463301 Sobic003G091200 Sobic003G091200 Sobic001G043500--Sobic003G091200 Sobic002G178700 Sobic002G178700 Sobic001G043500--Sobic002G178700
Octagon: transcription factors


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