Gene annotation
Transcriptome id Sobic.008G094800.1
Synonym Sb08g014065
Functional annotation OsFBX125 - F-box domain containing protein, expressed
UniProt C5YNL8
Pfam PF00646 PF08387
Panther DB PTHR32212 PTHR32212:SF76
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G69630 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os04g13150.1 : OsFBX125 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK08599 , KQK08598 , KQK08517 , KQK15162 , KQJ89338 , PNT64187 , KQJ85885
Barley HORVU5Hr1G012170.1 , HORVU5Hr1G012170.2 , HORVU6Hr1G020220.2 , HORVU6Hr1G020220.3 , HORVU6Hr1G020220.1 , HORVU2Hr1G009570.1 , HORVU7Hr1G096020.4 , HORVU7Hr1G096020.5 , HORVU7Hr1G096020.1 , HORVU7Hr1G096020.2 , HORVU7Hr1G096030.2 , HORVU7Hr1G096030.1 , HORVU2Hr1G012310.1
Wheat TraesCS5B02G480000 , TraesCS3B02G503300 , TraesCS3B02G503300 , TraesCS2B02G548500 , TraesCS7B02G101200 , TraesCS6A02G113500 , TraesCS3A02G427000 , TraesCS4D02G356500 , TraesCS3A02G379400 , TraesCS3A02G379400 , TraesCS3B02G463700 , TraesCS2B02G111500 , TraesCS5D02G063500 , TraesCS5D02G063500 , TraesCS7B02G312400 , TraesCS5B02G057900 , TraesCS2D02G019000 , TraesCS2A02G073700 , TraesCS4B02G115300 , TraesCS2A02G073600 , TraesCS7B02G312300 , TraesCS5D02G063100 , TraesCS7D02G406000 , TraesCS4D02G117300 , TraesCS4D02G113000 , TraesCS6B02G140500 , TraesCS5B02G058100 , TraesCS2A02G555900 , TraesCS3D02G422100 , TraesCS3D02G453500 , TraesCS3B02G463300 , TraesCS7D02G104200 , TraesCS3B02G499800 , TraesCS3B02G499800 , TraesCS3B02G499800 , TraesCS3B02G499800 , TraesCS4A02G205300 , TraesCS5B02G065000 , TraesCS4B02G264800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G152600 RIO1 family protein, expressed -
2 Sobic.005G022300 - -
3 Sobic.001G163300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@zinc finger protein-related, putative, expressed K11968: ariadne-1
4 Sobic.003G092500 seven in absentia protein family protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
5 Sobic.009G057600 B3 DNA binding domain containing protein, expressed -
6 Sobic.003G356300 cadmium tolerance factor, putative, expressed -
7 Sobic.005G202000 expressed protein -
8 Sobic.007G127950 - -
9 Sobic.001G138900 expressed protein -
10 Sobic.007G070200 tentative name(PubMedID : 31536532)@OsFBX265 - F-box domain containing protein, expressed -
11 Sobic.008G044600 expressed protein -
12 Sobic.001G217300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@auxin response factor 18, putative, expressed -
13 Sobic.006G066000 - -
14 Sobic.006G215000 PAZ domain-containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
15 Sobic.002G203500 protein binding protein, putative, expressed -
16 Sobic.008G159400 expressed protein -
17 Sobic.004G352100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
18 Sobic.007G128100 expressed protein -
19 Sobic.005G125000 ATP binding protein, putative, expressed K17592: sacsin
20 Sobic.003G399000 expressed protein -


Gene co-expression network
sample Sobic008G094800 Sobic008G094800 Sobic001G152600 Sobic001G152600 Sobic008G094800--Sobic001G152600 Sobic005G022300 Sobic005G022300 Sobic008G094800--Sobic005G022300 Sobic001G163300 Sobic001G163300 Sobic008G094800--Sobic001G163300 Sobic003G092500 Sobic003G092500 Sobic008G094800--Sobic003G092500 Sobic009G057600 Sobic009G057600 Sobic008G094800--Sobic009G057600 Sobic003G356300 Sobic003G356300 Sobic008G094800--Sobic003G356300 Sobic005G202000 Sobic005G202000 Sobic008G094800--Sobic005G202000 Sobic007G127950 Sobic007G127950 Sobic008G094800--Sobic007G127950 Sobic001G138900 Sobic001G138900 Sobic008G094800--Sobic001G138900 Sobic008G161100 Sobic008G161100 Sobic001G152600--Sobic008G161100 Sobic001G152600--Sobic001G163300 Sobic001G137400 Sobic001G137400 Sobic001G152600--Sobic001G137400 Sobic001G152600--Sobic005G202000 Sobic003G191600 Sobic003G191600 Sobic001G152600--Sobic003G191600 Sobic003G207000 Sobic003G207000 Sobic001G152600--Sobic003G207000 Sobic001G217300 Sobic001G217300 Sobic001G152600--Sobic001G217300 Sobic005G166100 Sobic005G166100 Sobic001G152600--Sobic005G166100 Sobic008G098700 Sobic008G098700 Sobic001G152600--Sobic008G098700 Sobic006G072900 Sobic006G072900 Sobic005G022300--Sobic006G072900 Sobic002G203500 Sobic002G203500 Sobic005G022300--Sobic002G203500 Sobic004G045566 Sobic004G045566 Sobic005G022300--Sobic004G045566 Sobic006G022500 Sobic006G022500 Sobic005G022300--Sobic006G022500 Sobic005G099200 Sobic005G099200 Sobic005G022300--Sobic005G099200 Sobic010G015000 Sobic010G015000 Sobic005G022300--Sobic010G015000 Sobic006G066000 Sobic006G066000 Sobic005G022300--Sobic006G066000 Sobic008G099500 Sobic008G099500 Sobic005G022300--Sobic008G099500 Sobic005G022300--Sobic003G356300 Sobic001G163300--Sobic001G152600 Sobic001G163300--Sobic001G217300 Sobic003G017200 Sobic003G017200 Sobic001G163300--Sobic003G017200 Sobic001G316900 Sobic001G316900 Sobic001G163300--Sobic001G316900 Sobic008G010900 Sobic008G010900 Sobic001G163300--Sobic008G010900 Sobic006G200200 Sobic006G200200 Sobic001G163300--Sobic006G200200 Sobic001G163300--Sobic008G094800 Sobic003G144200 Sobic003G144200 Sobic001G163300--Sobic003G144200 Sobic006G017600 Sobic006G017600 Sobic001G163300--Sobic006G017600 Sobic003G092066 Sobic003G092066 Sobic003G092500--Sobic003G092066 Sobic007G118050 Sobic007G118050 Sobic003G092500--Sobic007G118050 Sobic010G237650 Sobic010G237650 Sobic003G092500--Sobic010G237650 Sobic002G106200 Sobic002G106200 Sobic003G092500--Sobic002G106200 Sobic003G066700 Sobic003G066700 Sobic003G092500--Sobic003G066700 Sobic007G118075 Sobic007G118075 Sobic003G092500--Sobic007G118075 Sobic003G092500--Sobic006G022500 Sobic003G092500--Sobic007G127950 Sobic006G181500 Sobic006G181500 Sobic003G092500--Sobic006G181500 Sobic009G057600--Sobic008G094800 Sobic002G338900 Sobic002G338900 Sobic009G057600--Sobic002G338900 Sobic007G128100 Sobic007G128100 Sobic009G057600--Sobic007G128100 Sobic006G027101 Sobic006G027101 Sobic009G057600--Sobic006G027101 Sobic010G190400 Sobic010G190400 Sobic009G057600--Sobic010G190400 Sobic003G027800 Sobic003G027800 Sobic009G057600--Sobic003G027800 Sobic010G173700 Sobic010G173700 Sobic009G057600--Sobic010G173700 Sobic010G004400 Sobic010G004400 Sobic009G057600--Sobic010G004400 Sobic005G125000 Sobic005G125000 Sobic009G057600--Sobic005G125000 Sobic006G215000 Sobic006G215000 Sobic003G356300--Sobic006G215000 Sobic003G356300--Sobic001G217300 Sobic003G356300--Sobic002G203500 Sobic003G356300--Sobic005G166100 Sobic003G356300--Sobic001G152600 Sobic003G356300--Sobic003G092500 Sobic003G356300--Sobic005G022300 Sobic001G340900 Sobic001G340900 Sobic003G356300--Sobic001G340900 Sobic001G043500 Sobic001G043500 Sobic003G356300--Sobic001G043500 Sobic005G202000--Sobic001G217300 Sobic005G202000--Sobic001G152600 Sobic005G172700 Sobic005G172700 Sobic005G202000--Sobic005G172700 Sobic004G149400 Sobic004G149400 Sobic005G202000--Sobic004G149400 Sobic005G202000--Sobic001G137400 Sobic003G022900 Sobic003G022900 Sobic005G202000--Sobic003G022900 Sobic005G202000--Sobic006G017600 Sobic005G202000--Sobic007G127950 Sobic003G049600 Sobic003G049600 Sobic005G202000--Sobic003G049600 Sobic001G534400 Sobic001G534400 Sobic007G127950--Sobic001G534400 Sobic003G091200 Sobic003G091200 Sobic007G127950--Sobic003G091200 Sobic008G112100 Sobic008G112100 Sobic007G127950--Sobic008G112100 Sobic003G411700 Sobic003G411700 Sobic007G127950--Sobic003G411700 Sobic003G343200 Sobic003G343200 Sobic007G127950--Sobic003G343200 Sobic001G500500 Sobic001G500500 Sobic007G127950--Sobic001G500500 Sobic002G271400 Sobic002G271400 Sobic007G127950--Sobic002G271400 Sobic001G242300 Sobic001G242300 Sobic007G127950--Sobic001G242300 Sobic001G211500 Sobic001G211500 Sobic007G127950--Sobic001G211500 Sobic001G138900--Sobic003G091200 Sobic001G138900--Sobic004G149400 Sobic005G062600 Sobic005G062600 Sobic001G138900--Sobic005G062600 Sobic001G212600 Sobic001G212600 Sobic001G138900--Sobic001G212600 Sobic004G207000 Sobic004G207000 Sobic001G138900--Sobic004G207000 Sobic010G222800 Sobic010G222800 Sobic001G138900--Sobic010G222800 Sobic005G160200 Sobic005G160200 Sobic001G138900--Sobic005G160200 Sobic006G106200 Sobic006G106200 Sobic001G138900--Sobic006G106200 Sobic004G327600 Sobic004G327600 Sobic001G138900--Sobic004G327600
Octagon: transcription factors


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