Gene annotation
Transcriptome id Sobic.008G159400.2
Synonym
Functional annotation expressed protein
UniProt A0A1Z5R6Y4
Pfam PF08458 PF05703
Panther DB PTHR31351 PTHR31351:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22810 : Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region
RAP-DB (Rice) LOC_Os03g43510.1 : expressed protein
MaizeGDB (Corn) Zm00025a004188 , Zm00025a007339 , Zm00025a017280
Brachypodium KQJ85923
Barley HORVU5Hr1G093460.4 , HORVU5Hr1G093460.7 , HORVU5Hr1G093460.6 , HORVU5Hr1G093460.3 , HORVU5Hr1G093460.2 , HORVU5Hr1G093460.9 , HORVU5Hr1G093460.8 , HORVU5Hr1G093460.11 , HORVU5Hr1G093460.10 , HORVU5Hr1G093460.12
Wheat TraesCS5B02G060100 , TraesCS5B02G060100 , TraesCS5A02G056700 , TraesCS5A02G056700 , TraesCS5A02G056700 , TraesCS5D02G067900 , TraesCS5D02G067900
Populus -


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cDNA sequences
Sobic.008G159400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G202000 expressed protein -
2 Sobic.009G254000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
3 Sobic.008G094800 OsFBX125 - F-box domain containing protein, expressed -
4 Sobic.009G205400 RING-H2 finger protein ATL2M, putative, expressed -
5 Sobic.002G257900 Highest expression level in primordial inflorescence(PubMedID : 27501690)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@"GW8/OsPL16(Ortholog in rice:Wang et al., 2012)"(PubMedID : 31659857)@OsSPL18 - SBP-box gene family member, expressed -
6 Sobic.004G203500 actin, putative, expressed K18584: ACTR3, actin-related protein 3
7 Sobic.001G217300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@auxin response factor 18, putative, expressed -
8 Sobic.001G537300 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
9 Sobic.010G029000 expressed protein -
10 Sobic.001G163300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@zinc finger protein-related, putative, expressed K11968: ariadne-1
11 Sobic.006G212500 - -
12 Sobic.002G103700 - -
13 Sobic.003G049600 CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
14 Sobic.003G240100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.004G262600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
16 Sobic.001G382400 TKL_IRAK_CrRLK1L-1.5 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
17 Sobic.003G399000 expressed protein -
18 Sobic.001G510300 cytochrome P450 protein, putative, expressed -
19 Sobic.003G410700 exostosin family domain containing protein, expressed -
20 Sobic.010G037600 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic008G159400 Sobic008G159400 Sobic005G202000 Sobic005G202000 Sobic008G159400--Sobic005G202000 Sobic009G254000 Sobic009G254000 Sobic008G159400--Sobic009G254000 Sobic008G094800 Sobic008G094800 Sobic008G159400--Sobic008G094800 Sobic009G205400 Sobic009G205400 Sobic008G159400--Sobic009G205400 Sobic002G257900 Sobic002G257900 Sobic008G159400--Sobic002G257900 Sobic004G203500 Sobic004G203500 Sobic008G159400--Sobic004G203500 Sobic001G217300 Sobic001G217300 Sobic008G159400--Sobic001G217300 Sobic001G537300 Sobic001G537300 Sobic008G159400--Sobic001G537300 Sobic010G029000 Sobic010G029000 Sobic008G159400--Sobic010G029000 Sobic005G202000--Sobic001G217300 Sobic001G152600 Sobic001G152600 Sobic005G202000--Sobic001G152600 Sobic005G172700 Sobic005G172700 Sobic005G202000--Sobic005G172700 Sobic004G149400 Sobic004G149400 Sobic005G202000--Sobic004G149400 Sobic001G137400 Sobic001G137400 Sobic005G202000--Sobic001G137400 Sobic003G022900 Sobic003G022900 Sobic005G202000--Sobic003G022900 Sobic006G017600 Sobic006G017600 Sobic005G202000--Sobic006G017600 Sobic007G127950 Sobic007G127950 Sobic005G202000--Sobic007G127950 Sobic003G049600 Sobic003G049600 Sobic005G202000--Sobic003G049600 Sobic006G140300 Sobic006G140300 Sobic009G254000--Sobic006G140300 Sobic007G197100 Sobic007G197100 Sobic009G254000--Sobic007G197100 Sobic003G298900 Sobic003G298900 Sobic009G254000--Sobic003G298900 Sobic002G366000 Sobic002G366000 Sobic009G254000--Sobic002G366000 Sobic001G540700 Sobic001G540700 Sobic009G254000--Sobic001G540700 Sobic003G224700 Sobic003G224700 Sobic009G254000--Sobic003G224700 Sobic002G006100 Sobic002G006100 Sobic009G254000--Sobic002G006100 Sobic004G250600 Sobic004G250600 Sobic009G254000--Sobic004G250600 Sobic005G013300 Sobic005G013300 Sobic009G254000--Sobic005G013300 Sobic008G094800--Sobic001G152600 Sobic005G022300 Sobic005G022300 Sobic008G094800--Sobic005G022300 Sobic001G163300 Sobic001G163300 Sobic008G094800--Sobic001G163300 Sobic003G092500 Sobic003G092500 Sobic008G094800--Sobic003G092500 Sobic009G057600 Sobic009G057600 Sobic008G094800--Sobic009G057600 Sobic003G356300 Sobic003G356300 Sobic008G094800--Sobic003G356300 Sobic008G094800--Sobic005G202000 Sobic008G094800--Sobic007G127950 Sobic001G138900 Sobic001G138900 Sobic008G094800--Sobic001G138900 Sobic009G205400--Sobic009G254000 Sobic004G207000 Sobic004G207000 Sobic009G205400--Sobic004G207000 Sobic006G081500 Sobic006G081500 Sobic009G205400--Sobic006G081500 Sobic003G240100 Sobic003G240100 Sobic009G205400--Sobic003G240100 Sobic006G022400 Sobic006G022400 Sobic009G205400--Sobic006G022400 Sobic009G205400--Sobic001G138900 Sobic009G205400--Sobic003G049600 Sobic009G205400--Sobic003G224700 Sobic003G351900 Sobic003G351900 Sobic009G205400--Sobic003G351900 Sobic003G017200 Sobic003G017200 Sobic002G257900--Sobic003G017200 Sobic001G145100 Sobic001G145100 Sobic002G257900--Sobic001G145100 Sobic001G106000 Sobic001G106000 Sobic002G257900--Sobic001G106000 Sobic003G378000 Sobic003G378000 Sobic002G257900--Sobic003G378000 Sobic003G223900 Sobic003G223900 Sobic002G257900--Sobic003G223900 Sobic001G106200 Sobic001G106200 Sobic002G257900--Sobic001G106200 Sobic003G144200 Sobic003G144200 Sobic002G257900--Sobic003G144200 Sobic010G033300 Sobic010G033300 Sobic002G257900--Sobic010G033300 Sobic002G257900--Sobic001G163300 Sobic004G295500 Sobic004G295500 Sobic004G203500--Sobic004G295500 Sobic010G054000 Sobic010G054000 Sobic004G203500--Sobic010G054000 Sobic007G203000 Sobic007G203000 Sobic004G203500--Sobic007G203000 Sobic006G183200 Sobic006G183200 Sobic004G203500--Sobic006G183200 Sobic003G205300 Sobic003G205300 Sobic004G203500--Sobic003G205300 Sobic002G388600 Sobic002G388600 Sobic004G203500--Sobic002G388600 Sobic004G203500--Sobic003G240100 Sobic006G193500 Sobic006G193500 Sobic004G203500--Sobic006G193500 Sobic003G410700 Sobic003G410700 Sobic004G203500--Sobic003G410700 Sobic001G217300--Sobic001G163300 Sobic001G217300--Sobic005G202000 Sobic003G031500 Sobic003G031500 Sobic001G217300--Sobic003G031500 Sobic001G217300--Sobic001G152600 Sobic001G316900 Sobic001G316900 Sobic001G217300--Sobic001G316900 Sobic004G262600 Sobic004G262600 Sobic001G217300--Sobic004G262600 Sobic001G217300--Sobic003G356300 Sobic001G217300--Sobic003G223900 Sobic006G203400 Sobic006G203400 Sobic001G217300--Sobic006G203400 Sobic001G450800 Sobic001G450800 Sobic001G537300--Sobic001G450800 Sobic005G079700 Sobic005G079700 Sobic001G537300--Sobic005G079700 Sobic003G361300 Sobic003G361300 Sobic001G537300--Sobic003G361300 Sobic003G399000 Sobic003G399000 Sobic001G537300--Sobic003G399000 Sobic004G054200 Sobic004G054200 Sobic001G537300--Sobic004G054200 Sobic002G239900 Sobic002G239900 Sobic001G537300--Sobic002G239900 Sobic001G157400 Sobic001G157400 Sobic001G537300--Sobic001G157400 Sobic010G033700 Sobic010G033700 Sobic001G537300--Sobic010G033700 Sobic002G136800 Sobic002G136800 Sobic001G537300--Sobic002G136800 Sobic003G100700 Sobic003G100700 Sobic010G029000--Sobic003G100700 Sobic006G160200 Sobic006G160200 Sobic010G029000--Sobic006G160200 Sobic001G231200 Sobic001G231200 Sobic010G029000--Sobic001G231200 Sobic001G116600 Sobic001G116600 Sobic010G029000--Sobic001G116600 Sobic004G267600 Sobic004G267600 Sobic010G029000--Sobic004G267600 Sobic003G013000 Sobic003G013000 Sobic010G029000--Sobic003G013000 Sobic001G522300 Sobic001G522300 Sobic010G029000--Sobic001G522300 Sobic001G440900 Sobic001G440900 Sobic010G029000--Sobic001G440900 Sobic001G487200 Sobic001G487200 Sobic010G029000--Sobic001G487200
Octagon: transcription factors


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