Gene annotation
Transcriptome id Sobic.003G399000.2,Sobic.003G399000.1
Synonym Sb03g043560
Functional annotation expressed protein
UniProt C5XG56
Pfam PF04398
Panther DB PTHR31676 PTHR31676:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07470 : Protein of unknown function, DUF538
RAP-DB (Rice) LOC_Os01g68500.1 : expressed protein
MaizeGDB (Corn) Zm00025a026323
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G399000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G262600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
2 Sobic.004G204400 OsFBX309 - F-box domain containing protein, expressed -
3 Sobic.009G159900 homeodomain protein, putative, expressed -
4 Sobic.001G537300 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
5 Sobic.009G121750 - -
6 Sobic.004G053300 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
7 Sobic.003G361300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
8 Sobic.001G217300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@auxin response factor 18, putative, expressed -
9 Sobic.001G316900 bZIP family transcription factor, putative, expressed -
10 Sobic.010G033700 - -
11 Sobic.001G450800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
12 Sobic.002G244700 cytosolic phospholipase A2 beta, putative, expressed K19219: peptidyl-lysine (3S)-dioxygenase / protease
13 Sobic.003G410700 exostosin family domain containing protein, expressed -
14 Sobic.009G013100 rp3 protein, putative, expressed -
15 Sobic.003G056500 staphylococcal nuclease homologue, putative, expressed -
16 Sobic.002G009900 phytosulfokine receptor precursor, putative, expressed -
17 Sobic.002G136800 protein kinase family protein, putative, expressed -
18 Sobic.005G079700 expressed protein -
19 Sobic.008G000800 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
20 Sobic.001G382400 TKL_IRAK_CrRLK1L-1.5 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -


Gene co-expression network
sample Sobic003G399000 Sobic003G399000 Sobic004G262600 Sobic004G262600 Sobic003G399000--Sobic004G262600 Sobic004G204400 Sobic004G204400 Sobic003G399000--Sobic004G204400 Sobic009G159900 Sobic009G159900 Sobic003G399000--Sobic009G159900 Sobic001G537300 Sobic001G537300 Sobic003G399000--Sobic001G537300 Sobic009G121750 Sobic009G121750 Sobic003G399000--Sobic009G121750 Sobic004G053300 Sobic004G053300 Sobic003G399000--Sobic004G053300 Sobic003G361300 Sobic003G361300 Sobic003G399000--Sobic003G361300 Sobic001G217300 Sobic001G217300 Sobic003G399000--Sobic001G217300 Sobic001G316900 Sobic001G316900 Sobic003G399000--Sobic001G316900 Sobic003G410700 Sobic003G410700 Sobic004G262600--Sobic003G410700 Sobic003G223900 Sobic003G223900 Sobic004G262600--Sobic003G223900 Sobic004G261200 Sobic004G261200 Sobic004G262600--Sobic004G261200 Sobic009G188800 Sobic009G188800 Sobic004G262600--Sobic009G188800 Sobic004G262600--Sobic003G399000 Sobic009G194200 Sobic009G194200 Sobic004G262600--Sobic009G194200 Sobic004G262600--Sobic001G217300 Sobic001G139300 Sobic001G139300 Sobic004G262600--Sobic001G139300 Sobic003G017200 Sobic003G017200 Sobic004G262600--Sobic003G017200 Sobic004G121000 Sobic004G121000 Sobic004G204400--Sobic004G121000 Sobic003G266700 Sobic003G266700 Sobic004G204400--Sobic003G266700 Sobic002G224450 Sobic002G224450 Sobic004G204400--Sobic002G224450 Sobic003G366850 Sobic003G366850 Sobic004G204400--Sobic003G366850 Sobic008G065400 Sobic008G065400 Sobic004G204400--Sobic008G065400 Sobic003G374500 Sobic003G374500 Sobic004G204400--Sobic003G374500 Sobic003G436900 Sobic003G436900 Sobic004G204400--Sobic003G436900 Sobic001G262900 Sobic001G262900 Sobic004G204400--Sobic001G262900 Sobic002G400900 Sobic002G400900 Sobic004G204400--Sobic002G400900 Sobic006G032200 Sobic006G032200 Sobic009G159900--Sobic006G032200 Sobic003G144200 Sobic003G144200 Sobic009G159900--Sobic003G144200 Sobic009G170100 Sobic009G170100 Sobic009G159900--Sobic009G170100 Sobic001G075800 Sobic001G075800 Sobic009G159900--Sobic001G075800 Sobic001G157400 Sobic001G157400 Sobic009G159900--Sobic001G157400 Sobic003G342600 Sobic003G342600 Sobic009G159900--Sobic003G342600 Sobic009G159900--Sobic003G361300 Sobic004G273200 Sobic004G273200 Sobic009G159900--Sobic004G273200 Sobic002G023900 Sobic002G023900 Sobic009G159900--Sobic002G023900 Sobic001G450800 Sobic001G450800 Sobic001G537300--Sobic001G450800 Sobic005G079700 Sobic005G079700 Sobic001G537300--Sobic005G079700 Sobic001G537300--Sobic003G361300 Sobic001G537300--Sobic003G399000 Sobic004G054200 Sobic004G054200 Sobic001G537300--Sobic004G054200 Sobic002G239900 Sobic002G239900 Sobic001G537300--Sobic002G239900 Sobic001G537300--Sobic001G157400 Sobic010G033700 Sobic010G033700 Sobic001G537300--Sobic010G033700 Sobic002G136800 Sobic002G136800 Sobic001G537300--Sobic002G136800 Sobic002G431200 Sobic002G431200 Sobic009G121750--Sobic002G431200 Sobic009G121750--Sobic008G065400 Sobic009G121750--Sobic005G079700 Sobic006G249200 Sobic006G249200 Sobic009G121750--Sobic006G249200 Sobic005G166300 Sobic005G166300 Sobic009G121750--Sobic005G166300 Sobic003G429500 Sobic003G429500 Sobic009G121750--Sobic003G429500 Sobic008G106400 Sobic008G106400 Sobic009G121750--Sobic008G106400 Sobic002G171400 Sobic002G171400 Sobic009G121750--Sobic002G171400 Sobic009G121750--Sobic003G366850 Sobic003G277900 Sobic003G277900 Sobic004G053300--Sobic003G277900 Sobic008G000800 Sobic008G000800 Sobic004G053300--Sobic008G000800 Sobic005G159600 Sobic005G159600 Sobic004G053300--Sobic005G159600 Sobic008G099500 Sobic008G099500 Sobic004G053300--Sobic008G099500 Sobic001G494100 Sobic001G494100 Sobic004G053300--Sobic001G494100 Sobic003G445900 Sobic003G445900 Sobic004G053300--Sobic003G445900 Sobic004G227500 Sobic004G227500 Sobic004G053300--Sobic004G227500 Sobic004G053300--Sobic004G054200 Sobic008G086200 Sobic008G086200 Sobic004G053300--Sobic008G086200 Sobic003G361300--Sobic001G450800 Sobic001G430700 Sobic001G430700 Sobic003G361300--Sobic001G430700 Sobic003G198150 Sobic003G198150 Sobic003G361300--Sobic003G198150 Sobic008G044750 Sobic008G044750 Sobic003G361300--Sobic008G044750 Sobic003G227600 Sobic003G227600 Sobic003G361300--Sobic003G227600 Sobic003G040800 Sobic003G040800 Sobic003G361300--Sobic003G040800 Sobic009G216900 Sobic009G216900 Sobic003G361300--Sobic009G216900 Sobic003G233900 Sobic003G233900 Sobic003G361300--Sobic003G233900 Sobic009G128300 Sobic009G128300 Sobic003G361300--Sobic009G128300 Sobic001G163300 Sobic001G163300 Sobic001G217300--Sobic001G163300 Sobic005G202000 Sobic005G202000 Sobic001G217300--Sobic005G202000 Sobic003G031500 Sobic003G031500 Sobic001G217300--Sobic003G031500 Sobic001G152600 Sobic001G152600 Sobic001G217300--Sobic001G152600 Sobic001G217300--Sobic001G316900 Sobic001G217300--Sobic004G262600 Sobic003G356300 Sobic003G356300 Sobic001G217300--Sobic003G356300 Sobic001G217300--Sobic003G223900 Sobic006G203400 Sobic006G203400 Sobic001G217300--Sobic006G203400 Sobic001G316900--Sobic003G144200 Sobic001G061900 Sobic001G061900 Sobic001G316900--Sobic001G061900 Sobic001G316900--Sobic003G017200 Sobic001G316900--Sobic009G170100 Sobic006G110000 Sobic006G110000 Sobic001G316900--Sobic006G110000 Sobic002G068800 Sobic002G068800 Sobic001G316900--Sobic002G068800 Sobic001G316900--Sobic001G157400 Sobic001G316900--Sobic009G159900 Sobic009G037800 Sobic009G037800 Sobic001G316900--Sobic009G037800
Octagon: transcription factors


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