Gene annotation
| Transcriptome id | Sobic.002G009900.1 |
|---|---|
| Synonym | TOAD2, Sb02g001070, RPK2 |
| Functional annotation | phytosulfokine receptor precursor, putative, expressed |
| UniProt | C5X7A6 |
| Pfam | PF08263 PF13855 PF00069 |
| Panther DB | PTHR27000 PTHR27000:SF80 |
| NCBI CDD | KOG1187; Serine/threonine protein kinase |
| KEGG Orthology | - |
| Gene Ontology | GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity |
Orthologs (automatic annotation)
| TAIR | AT3G02130 : receptor-like protein kinase 2 |
|---|---|
| RAP-DB (Rice) | LOC_Os03g54900.2 : phytosulfokine receptor precursor, putative, expressed |
| MaizeGDB (Corn) | Zm00025a044890 |
| Brachypodium | PNT77211 |
| Barley | HORVU2Hr1G063910.1 , HORVU2Hr1G063910.3 , HORVU2Hr1G063910.2 , HORVU2Hr1G063910.5 , HORVU2Hr1G063910.4 |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G450800 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed | K16055: trehalose 6-phosphate synthase/phosphatase |
| 2 | Sobic.001G430700 | expressed protein | - |
| 3 | Sobic.007G051600 | - | - |
| 4 | Sobic.003G361300 | "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed | K13946: AUX1, auxin influx carrier (AUX1 LAX family) |
| 5 | Sobic.001G438800 | armadillo/beta-catenin repeat family protein, putative, expressed | - |
| 6 | Sobic.004G245900 | - | - |
| 7 | Sobic.001G503400 | expressed protein | - |
| 8 | Sobic.009G156600 | "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed | K13946: AUX1, auxin influx carrier (AUX1 LAX family) |
| 9 | Sobic.007G089533 | - | - |
| 10 | Sobic.009G201500 | expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSP101 Heat shock protein 101("PubMedID : 26759170,PubMedID : 24597475")@heat shock protein 101, putative, expressed | K03695: ATP-dependent Clp protease ATP-binding subunit ClpB |
| 11 | Sobic.009G000700 | Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed | - |
| 12 | Sobic.004G331300 | AP2 domain containing protein, expressed | - |
| 13 | Sobic.003G015100 | "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.3 - Probable indole-3-acetic acid-amido synthetase, expressed | K14487: auxin responsive GH3 gene family |
| 14 | Sobic.004G310600 | Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed | - |
| 15 | Sobic.002G043500 | aldehyde oxidase, putative, expressed | K09842: abscisic-aldehyde oxidase |
| 16 | Sobic.007G178200 | ER lumen protein retaining receptor, putative, expressed | - |
| 17 | Sobic.003G198150 | - | - |
| 18 | Sobic.001G523100 | - | - |
| 19 | Sobic.003G078501 | - | - |
| 20 | Sobic.003G225900 | expressed protein | - |
Gene co-expression network
Octagon: transcription factors
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