Gene annotation
Transcriptome id Sobic.001G523100.1
Synonym
Functional annotation -
UniProt A0A1B6QQV5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G089533 - -
2 Sobic.007G051600 - -
3 Sobic.003G015100 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.3 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
4 Sobic.002G244700 cytosolic phospholipase A2 beta, putative, expressed K19219: peptidyl-lysine (3S)-dioxygenase / protease
5 Sobic.004G245900 - -
6 Sobic.003G361300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
7 Sobic.003G429500 - -
8 Sobic.009G121750 - -
9 Sobic.001G450800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
10 Sobic.008G044750 - -
11 Sobic.003G366850 - -
12 Sobic.001G055900 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
13 Sobic.006G249200 expressed protein -
14 Sobic.002G009900 phytosulfokine receptor precursor, putative, expressed -
15 Sobic.001G184500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR55 - Auxin-responsive SAUR gene family member, expressed -
16 Sobic.002G431200 - -
17 Sobic.004G331300 AP2 domain containing protein, expressed -
18 Sobic.003G161700 expressed protein -
19 Sobic.007G005000 expressed protein -
20 Sobic.005G079700 expressed protein -


Gene co-expression network
sample Sobic001G523100 Sobic001G523100 Sobic007G089533 Sobic007G089533 Sobic001G523100--Sobic007G089533 Sobic007G051600 Sobic007G051600 Sobic001G523100--Sobic007G051600 Sobic003G015100 Sobic003G015100 Sobic001G523100--Sobic003G015100 Sobic002G244700 Sobic002G244700 Sobic001G523100--Sobic002G244700 Sobic004G245900 Sobic004G245900 Sobic001G523100--Sobic004G245900 Sobic003G361300 Sobic003G361300 Sobic001G523100--Sobic003G361300 Sobic003G429500 Sobic003G429500 Sobic001G523100--Sobic003G429500 Sobic009G121750 Sobic009G121750 Sobic001G523100--Sobic009G121750 Sobic001G450800 Sobic001G450800 Sobic001G523100--Sobic001G450800 Sobic004G331300 Sobic004G331300 Sobic007G089533--Sobic004G331300 Sobic009G000700 Sobic009G000700 Sobic007G089533--Sobic009G000700 Sobic007G089533--Sobic007G051600 Sobic004G310600 Sobic004G310600 Sobic007G089533--Sobic004G310600 Sobic007G089533--Sobic003G015100 Sobic004G155150 Sobic004G155150 Sobic007G089533--Sobic004G155150 Sobic009G253950 Sobic009G253950 Sobic007G089533--Sobic009G253950 Sobic010G006700 Sobic010G006700 Sobic007G089533--Sobic010G006700 Sobic001G159850 Sobic001G159850 Sobic007G089533--Sobic001G159850 Sobic007G051600--Sobic004G331300 Sobic007G051600--Sobic009G000700 Sobic007G051600--Sobic004G310600 Sobic007G051600--Sobic001G159850 Sobic001G184500 Sobic001G184500 Sobic003G015100--Sobic001G184500 Sobic003G015100--Sobic007G089533 Sobic002G079801 Sobic002G079801 Sobic003G015100--Sobic002G079801 Sobic008G044750 Sobic008G044750 Sobic003G015100--Sobic008G044750 Sobic010G101700 Sobic010G101700 Sobic003G015100--Sobic010G101700 Sobic007G005000 Sobic007G005000 Sobic003G015100--Sobic007G005000 Sobic003G015100--Sobic003G429500 Sobic003G198150 Sobic003G198150 Sobic003G015100--Sobic003G198150 Sobic003G015100--Sobic003G361300 Sobic004G204400 Sobic004G204400 Sobic002G244700--Sobic004G204400 Sobic002G244700--Sobic001G523100 Sobic004G180500 Sobic004G180500 Sobic002G244700--Sobic004G180500 Sobic002G244700--Sobic009G121750 Sobic002G431200 Sobic002G431200 Sobic002G244700--Sobic002G431200 Sobic004G332000 Sobic004G332000 Sobic002G244700--Sobic004G332000 Sobic002G105000 Sobic002G105000 Sobic002G244700--Sobic002G105000 Sobic001G119700 Sobic001G119700 Sobic002G244700--Sobic001G119700 Sobic008G012700 Sobic008G012700 Sobic002G244700--Sobic008G012700 Sobic004G245900--Sobic004G310600 Sobic003G373150 Sobic003G373150 Sobic004G245900--Sobic003G373150 Sobic004G245900--Sobic009G000700 Sobic004G245900--Sobic003G198150 Sobic004G283201 Sobic004G283201 Sobic004G245900--Sobic004G283201 Sobic003G233900 Sobic003G233900 Sobic004G245900--Sobic003G233900 Sobic006G055600 Sobic006G055600 Sobic004G245900--Sobic006G055600 Sobic004G245900--Sobic003G361300 Sobic004G321000 Sobic004G321000 Sobic004G245900--Sobic004G321000 Sobic003G361300--Sobic001G450800 Sobic001G430700 Sobic001G430700 Sobic003G361300--Sobic001G430700 Sobic003G361300--Sobic003G198150 Sobic003G361300--Sobic008G044750 Sobic003G227600 Sobic003G227600 Sobic003G361300--Sobic003G227600 Sobic003G040800 Sobic003G040800 Sobic003G361300--Sobic003G040800 Sobic009G216900 Sobic009G216900 Sobic003G361300--Sobic009G216900 Sobic003G361300--Sobic003G233900 Sobic009G128300 Sobic009G128300 Sobic003G361300--Sobic009G128300 Sobic003G366850 Sobic003G366850 Sobic003G429500--Sobic003G366850 Sobic008G065400 Sobic008G065400 Sobic003G429500--Sobic008G065400 Sobic002G171400 Sobic002G171400 Sobic003G429500--Sobic002G171400 Sobic003G429500--Sobic002G431200 Sobic005G043100 Sobic005G043100 Sobic003G429500--Sobic005G043100 Sobic001G261480 Sobic001G261480 Sobic003G429500--Sobic001G261480 Sobic003G266700 Sobic003G266700 Sobic003G429500--Sobic003G266700 Sobic003G429500--Sobic007G005000 Sobic008G045600 Sobic008G045600 Sobic003G429500--Sobic008G045600 Sobic009G121750--Sobic002G431200 Sobic009G121750--Sobic008G065400 Sobic005G079700 Sobic005G079700 Sobic009G121750--Sobic005G079700 Sobic006G249200 Sobic006G249200 Sobic009G121750--Sobic006G249200 Sobic005G166300 Sobic005G166300 Sobic009G121750--Sobic005G166300 Sobic009G121750--Sobic003G429500 Sobic008G106400 Sobic008G106400 Sobic009G121750--Sobic008G106400 Sobic009G121750--Sobic002G171400 Sobic009G121750--Sobic003G366850 Sobic001G450800--Sobic003G361300 Sobic001G450800--Sobic001G430700 Sobic001G450800--Sobic003G198150 Sobic001G106000 Sobic001G106000 Sobic001G450800--Sobic001G106000 Sobic001G450800--Sobic003G040800 Sobic001G450800--Sobic003G227600 Sobic001G450800--Sobic008G044750 Sobic001G450800--Sobic009G216900 Sobic004G285100 Sobic004G285100 Sobic001G450800--Sobic004G285100
Octagon: transcription factors


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