Gene annotation
| Transcriptome id | Sobic.002G043500.1 |
|---|---|
| Synonym | ATAO, AO1, AAO1, AT-AO1, AOalpha, AtAO1, Sb02g003720 |
| Functional annotation | aldehyde oxidase, putative, expressed |
| UniProt | C5XAA2 |
| Pfam | PF00111 PF01799 PF03450 PF01315 PF00941 PF02738 |
| Panther DB | PTHR11908 PTHR11908:SF98 |
| NCBI CDD | - |
| KEGG Orthology | K09842; abscisic-aldehyde oxidase |
| Gene Ontology | GO:0009055; electron transfer activity GO:0016491oxidoreductase activity |
Orthologs (automatic annotation)
| TAIR | AT1G04580 : aldehyde oxidase 4 |
|---|---|
| RAP-DB (Rice) | LOC_Os03g57680.1 : aldehyde oxidase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a045085 |
| Brachypodium | KQK20762 , KQK20763 , KQK20761 |
| Barley | HORVU2Hr1G057990.1 , HORVU2Hr1G057960.7 , HORVU2Hr1G057960.6 , HORVU2Hr1G057960.5 , HORVU2Hr1G057960.4 , HORVU2Hr1G057960.9 , HORVU2Hr1G057960.8 , HORVU2Hr1G057960.13 , HORVU2Hr1G057960.12 , HORVU2Hr1G057960.3 , HORVU2Hr1G057960.2 , HORVU2Hr1G057960.1 , HORVU2Hr1G057960.11 , HORVU2Hr1G057960.10 |
| Wheat | TraesCS7B02G419000 , TraesCS2D02G248700 , TraesCS2D02G248700 , TraesCS2D02G248700 , TraesCS2A02G246300 , TraesCS2A02G246300 , TraesCS2A02G246300 , TraesCS2A02G246300 , TraesCS2B02G270600 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G110300 | Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@UBX domain-containing protein, putative, expressed | - |
| 2 | Sobic.001G083800 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cyclic nucleotide-gated ion channel 2, putative, expressed | K05391: cyclic nucleotide gated channel, plant |
| 3 | Sobic.001G179900 | DCL2, putative, expressed | K11592: DICER1, endoribonuclease Dicer |
| 4 | Sobic.010G033700 | - | - |
| 5 | Sobic.002G189700 | nucleobase-ascorbate transporter, putative, expressed | - |
| 6 | Sobic.001G333900 | Diacylglycerol kinase 1 DGK1 (At)(PubMedID : 27208977)@diacylglycerol kinase 1, putative, expressed | K00901: dgkA, diacylglycerol kinase (ATP) |
| 7 | Sobic.002G009900 | phytosulfokine receptor precursor, putative, expressed | - |
| 8 | Sobic.007G196900 | expressed protein | - |
| 9 | Sobic.004G305200 | PPR repeat domain containing protein, putative, expressed | - |
| 10 | Sobic.010G147600 | reticulon domain containing protein, putative, expressed | - |
| 11 | Sobic.009G108700 | -(PubMedID : 26976818)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed | K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) |
| 12 | Sobic.002G387200 | Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, putative, expressed | K12900: FUS-interacting serine-arginine-rich protein 1 |
| 13 | Sobic.001G413800 | expressed protein | K13141: integrator complex subunit 4 |
| 14 | Sobic.001G055900 | zinc finger, C3HC4 type domain containing protein, expressed | K16277: E3 ubiquitin-protein ligase DRIP |
| 15 | Sobic.004G086200 | peptidyl-prolyl cis-trans isomerase, putative, expressed | K09566: peptidyl-prolyl isomerase G (cyclophilin G) |
| 16 | Sobic.003G374500 | pentatricopeptide repeat domain containing protein, putative, expressed | - |
| 17 | Sobic.006G180700 | SNF2 family N-terminal domain containing protein, expressed | K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 |
| 18 | Sobic.001G477700 | WD domain, G-beta repeat domain containing protein, expressed | K11807: WDTC1, WD and tetratricopeptide repeats protein 1 |
| 19 | Sobic.002G429400 | PPR repeat containing protein, expressed | - |
| 20 | Sobic.007G112000 | - | - |
Gene co-expression network
Octagon: transcription factors
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