Gene annotation
Transcriptome id Sobic.002G136800.2,Sobic.002G136800.1
Synonym Sb02g012380
Functional annotation protein kinase family protein, putative, expressed
UniProt A0A1W0W3U5 , C5X6K0
Pfam PF04564 PF00069
Panther DB PTHR27003 PTHR27003:SF2
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G45910 : U-box domain-containing protein kinase family protein
RAP-DB (Rice) LOC_Os09g39620.1 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G077700.9 , HORVU5Hr1G077700.2 , HORVU5Hr1G077700.1 , HORVU5Hr1G077700.6 , HORVU5Hr1G077700.7 , HORVU5Hr1G077700.4 , HORVU5Hr1G077700.5 , HORVU5Hr1G077700.16 , HORVU5Hr1G077700.18 , HORVU5Hr1G077700.19 , HORVU5Hr1G077700.10 , HORVU5Hr1G077700.11 , HORVU5Hr1G077700.12 , HORVU5Hr1G077700.13 , HORVU5Hr1G077700.14 , HORVU5Hr1G077700.15 , HORVU5Hr1G077700.17 , HORVU5Hr1G077700.29 , HORVU5Hr1G077700.25 , HORVU5Hr1G077700.24 , HORVU5Hr1G077700.26 , HORVU5Hr1G077700.20 , HORVU5Hr1G077700.22
Wheat TraesCS5B02G293900 , TraesCS4B02G350300 , TraesCS4D02G003800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G316500 GRAS family transcription factor domain containing protein, expressed -
2 Sobic.008G000800 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
3 Sobic.001G537300 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
4 Sobic.010G033700 - -
5 Sobic.004G227500 WD-40 repeat family protein, putative, expressed -
6 Sobic.003G399000 expressed protein -
7 Sobic.005G079700 expressed protein -
8 Sobic.009G013100 rp3 protein, putative, expressed -
9 Sobic.010G050700 protein kinase, putative, expressed -
10 Sobic.002G162000 - -
11 Sobic.008G109100 expressed protein -
12 Sobic.007G199300 MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
13 Sobic.010G229000 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
14 Sobic.010G004400 septum site-determining protein minD, putative, expressed K03609: septum site-determining protein MinD
15 Sobic.002G203500 protein binding protein, putative, expressed -
16 Sobic.001G494100 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
17 Sobic.007G187400 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
18 Sobic.004G135500 - -
19 Sobic.005G127300 expressed protein K14289: exportin-5
20 Sobic.004G054200 avr9/Cf-9 rapidly elicited protein 137, putative, expressed -


Gene co-expression network
sample Sobic002G136800 Sobic002G136800 Sobic002G316500 Sobic002G316500 Sobic002G136800--Sobic002G316500 Sobic008G000800 Sobic008G000800 Sobic002G136800--Sobic008G000800 Sobic001G537300 Sobic001G537300 Sobic002G136800--Sobic001G537300 Sobic010G033700 Sobic010G033700 Sobic002G136800--Sobic010G033700 Sobic004G227500 Sobic004G227500 Sobic002G136800--Sobic004G227500 Sobic003G399000 Sobic003G399000 Sobic002G136800--Sobic003G399000 Sobic005G079700 Sobic005G079700 Sobic002G136800--Sobic005G079700 Sobic009G013100 Sobic009G013100 Sobic002G136800--Sobic009G013100 Sobic010G050700 Sobic010G050700 Sobic002G136800--Sobic010G050700 Sobic002G316500--Sobic004G227500 Sobic002G316500--Sobic009G013100 Sobic010G229000 Sobic010G229000 Sobic002G316500--Sobic010G229000 Sobic008G099500 Sobic008G099500 Sobic002G316500--Sobic008G099500 Sobic005G127300 Sobic005G127300 Sobic002G316500--Sobic005G127300 Sobic010G046400 Sobic010G046400 Sobic002G316500--Sobic010G046400 Sobic002G316500--Sobic008G000800 Sobic007G195400 Sobic007G195400 Sobic002G316500--Sobic007G195400 Sobic007G130300 Sobic007G130300 Sobic002G316500--Sobic007G130300 Sobic008G000800--Sobic010G229000 Sobic004G053300 Sobic004G053300 Sobic008G000800--Sobic004G053300 Sobic010G139301 Sobic010G139301 Sobic008G000800--Sobic010G139301 Sobic006G068400 Sobic006G068400 Sobic008G000800--Sobic006G068400 Sobic003G432900 Sobic003G432900 Sobic008G000800--Sobic003G432900 Sobic008G000800--Sobic009G013100 Sobic008G000800--Sobic004G227500 Sobic001G305400 Sobic001G305400 Sobic008G000800--Sobic001G305400 Sobic003G277900 Sobic003G277900 Sobic008G000800--Sobic003G277900 Sobic001G450800 Sobic001G450800 Sobic001G537300--Sobic001G450800 Sobic001G537300--Sobic005G079700 Sobic003G361300 Sobic003G361300 Sobic001G537300--Sobic003G361300 Sobic001G537300--Sobic003G399000 Sobic004G054200 Sobic004G054200 Sobic001G537300--Sobic004G054200 Sobic002G239900 Sobic002G239900 Sobic001G537300--Sobic002G239900 Sobic001G157400 Sobic001G157400 Sobic001G537300--Sobic001G157400 Sobic001G537300--Sobic010G033700 Sobic001G537300--Sobic002G136800 Sobic005G096800 Sobic005G096800 Sobic010G033700--Sobic005G096800 Sobic004G289600 Sobic004G289600 Sobic010G033700--Sobic004G289600 Sobic010G033700--Sobic010G139301 Sobic002G182150 Sobic002G182150 Sobic010G033700--Sobic002G182150 Sobic010G033700--Sobic005G079700 Sobic004G204400 Sobic004G204400 Sobic010G033700--Sobic004G204400 Sobic008G065400 Sobic008G065400 Sobic010G033700--Sobic008G065400 Sobic004G132100 Sobic004G132100 Sobic010G033700--Sobic004G132100 Sobic003G374500 Sobic003G374500 Sobic010G033700--Sobic003G374500 Sobic006G022500 Sobic006G022500 Sobic004G227500--Sobic006G022500 Sobic004G227500--Sobic002G316500 Sobic004G227500--Sobic010G046400 Sobic001G494100 Sobic001G494100 Sobic004G227500--Sobic001G494100 Sobic004G135500 Sobic004G135500 Sobic004G227500--Sobic004G135500 Sobic010G173900 Sobic010G173900 Sobic004G227500--Sobic010G173900 Sobic001G315400 Sobic001G315400 Sobic004G227500--Sobic001G315400 Sobic001G367100 Sobic001G367100 Sobic004G227500--Sobic001G367100 Sobic002G334600 Sobic002G334600 Sobic004G227500--Sobic002G334600 Sobic004G262600 Sobic004G262600 Sobic003G399000--Sobic004G262600 Sobic003G399000--Sobic004G204400 Sobic009G159900 Sobic009G159900 Sobic003G399000--Sobic009G159900 Sobic003G399000--Sobic001G537300 Sobic009G121750 Sobic009G121750 Sobic003G399000--Sobic009G121750 Sobic003G399000--Sobic004G053300 Sobic003G399000--Sobic003G361300 Sobic001G217300 Sobic001G217300 Sobic003G399000--Sobic001G217300 Sobic001G316900 Sobic001G316900 Sobic003G399000--Sobic001G316900 Sobic005G079700--Sobic008G065400 Sobic008G106400 Sobic008G106400 Sobic005G079700--Sobic008G106400 Sobic006G249200 Sobic006G249200 Sobic005G079700--Sobic006G249200 Sobic002G431200 Sobic002G431200 Sobic005G079700--Sobic002G431200 Sobic001G140200 Sobic001G140200 Sobic005G079700--Sobic001G140200 Sobic005G079700--Sobic003G374500 Sobic009G159300 Sobic009G159300 Sobic005G079700--Sobic009G159300 Sobic005G079700--Sobic009G121750 Sobic008G044750 Sobic008G044750 Sobic005G079700--Sobic008G044750 Sobic009G013100--Sobic002G316500 Sobic005G099150 Sobic005G099150 Sobic009G013100--Sobic005G099150 Sobic009G013100--Sobic010G139301 Sobic009G013100--Sobic008G000800 Sobic002G182300 Sobic002G182300 Sobic009G013100--Sobic002G182300 Sobic009G013100--Sobic010G229000 Sobic009G013100--Sobic006G068400 Sobic009G013100--Sobic004G227500 Sobic003G323900 Sobic003G323900 Sobic009G013100--Sobic003G323900 Sobic006G056000 Sobic006G056000 Sobic010G050700--Sobic006G056000 Sobic009G148200 Sobic009G148200 Sobic010G050700--Sobic009G148200 Sobic002G380100 Sobic002G380100 Sobic010G050700--Sobic002G380100 Sobic006G067700 Sobic006G067700 Sobic010G050700--Sobic006G067700 Sobic010G050700--Sobic001G367100 Sobic002G010800 Sobic002G010800 Sobic010G050700--Sobic002G010800 Sobic002G192500 Sobic002G192500 Sobic010G050700--Sobic002G192500 Sobic010G050700--Sobic004G227500 Sobic010G050700--Sobic002G334600
Octagon: transcription factors


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