Gene annotation
Transcriptome id Sobic.002G316500.4,Sobic.002G316500.3,Sobic.002G316500.1,Sobic.002G316500.2
Synonym Sb02g034550
Functional annotation GRAS family transcription factor domain containing protein, expressed
UniProt A0A1W0W6M8 , C5X9Z6
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37650 : GRAS family transcription factor
RAP-DB (Rice) LOC_Os11g47890.1 : GRAS family transcription factor domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK10137 , KQJ87052 , PNT62877
Barley HORVU4Hr1G027900.2 , HORVU4Hr1G027900.4 , HORVU4Hr1G027900.5 , HORVU4Hr1G027900.1 , HORVU4Hr1G027900.3
Wheat TraesCS4B02G141400 , TraesCS4B02G336200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G227500 WD-40 repeat family protein, putative, expressed -
2 Sobic.009G013100 rp3 protein, putative, expressed -
3 Sobic.010G229000 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
4 Sobic.008G099500 - -
5 Sobic.005G127300 expressed protein K14289: exportin-5
6 Sobic.010G046400 glyoxalase/bleomycin resistance protein/dioxygenase, putative, expressed -
7 Sobic.008G000800 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
8 Sobic.007G195400 FHA domain containing protein, putative, expressed -
9 Sobic.007G130300 ES43 protein, putative, expressed -
10 Sobic.004G204400 OsFBX309 - F-box domain containing protein, expressed -
11 Sobic.002G289000 expressed protein -
12 Sobic.006G022500 OsFBD9 - F-box and FBD domain containing protein, expressed -
13 Sobic.005G154700 OsFBX407 - F-box domain containing protein, expressed -
14 Sobic.010G173900 expressed protein -
15 Sobic.002G136800 protein kinase family protein, putative, expressed -
16 Sobic.009G053400 expressed protein -
17 Sobic.002G105000 OsFBD15 - F-box and FBD domain containing protein, expressed -
18 Sobic.009G164900 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
19 Sobic.003G445900 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
20 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -


Gene co-expression network
sample Sobic002G316500 Sobic002G316500 Sobic004G227500 Sobic004G227500 Sobic002G316500--Sobic004G227500 Sobic009G013100 Sobic009G013100 Sobic002G316500--Sobic009G013100 Sobic010G229000 Sobic010G229000 Sobic002G316500--Sobic010G229000 Sobic008G099500 Sobic008G099500 Sobic002G316500--Sobic008G099500 Sobic005G127300 Sobic005G127300 Sobic002G316500--Sobic005G127300 Sobic010G046400 Sobic010G046400 Sobic002G316500--Sobic010G046400 Sobic008G000800 Sobic008G000800 Sobic002G316500--Sobic008G000800 Sobic007G195400 Sobic007G195400 Sobic002G316500--Sobic007G195400 Sobic007G130300 Sobic007G130300 Sobic002G316500--Sobic007G130300 Sobic006G022500 Sobic006G022500 Sobic004G227500--Sobic006G022500 Sobic004G227500--Sobic002G316500 Sobic004G227500--Sobic010G046400 Sobic001G494100 Sobic001G494100 Sobic004G227500--Sobic001G494100 Sobic004G135500 Sobic004G135500 Sobic004G227500--Sobic004G135500 Sobic010G173900 Sobic010G173900 Sobic004G227500--Sobic010G173900 Sobic001G315400 Sobic001G315400 Sobic004G227500--Sobic001G315400 Sobic001G367100 Sobic001G367100 Sobic004G227500--Sobic001G367100 Sobic002G334600 Sobic002G334600 Sobic004G227500--Sobic002G334600 Sobic009G013100--Sobic002G316500 Sobic005G099150 Sobic005G099150 Sobic009G013100--Sobic005G099150 Sobic010G139301 Sobic010G139301 Sobic009G013100--Sobic010G139301 Sobic009G013100--Sobic008G000800 Sobic002G182300 Sobic002G182300 Sobic009G013100--Sobic002G182300 Sobic009G013100--Sobic010G229000 Sobic006G068400 Sobic006G068400 Sobic009G013100--Sobic006G068400 Sobic009G013100--Sobic004G227500 Sobic003G323900 Sobic003G323900 Sobic009G013100--Sobic003G323900 Sobic010G229000--Sobic008G000800 Sobic010G229000--Sobic003G323900 Sobic010G229000--Sobic009G013100 Sobic010G229000--Sobic010G139301 Sobic010G229000--Sobic006G068400 Sobic004G054200 Sobic004G054200 Sobic010G229000--Sobic004G054200 Sobic010G229000--Sobic004G227500 Sobic010G229000--Sobic002G316500 Sobic002G056100 Sobic002G056100 Sobic010G229000--Sobic002G056100 Sobic008G090300 Sobic008G090300 Sobic008G099500--Sobic008G090300 Sobic008G099500--Sobic005G099150 Sobic008G099500--Sobic006G022500 Sobic005G128000 Sobic005G128000 Sobic008G099500--Sobic005G128000 Sobic008G099500--Sobic004G227500 Sobic004G289500 Sobic004G289500 Sobic008G099500--Sobic004G289500 Sobic008G099500--Sobic002G334600 Sobic001G116100 Sobic001G116100 Sobic008G099500--Sobic001G116100 Sobic006G066000 Sobic006G066000 Sobic008G099500--Sobic006G066000 Sobic009G101600 Sobic009G101600 Sobic005G127300--Sobic009G101600 Sobic004G200866 Sobic004G200866 Sobic005G127300--Sobic004G200866 SobicK010000 SobicK010000 Sobic005G127300--SobicK010000 Sobic005G142200 Sobic005G142200 Sobic005G127300--Sobic005G142200 Sobic003G366850 Sobic003G366850 Sobic005G127300--Sobic003G366850 Sobic001G261480 Sobic001G261480 Sobic005G127300--Sobic001G261480 Sobic009G026400 Sobic009G026400 Sobic005G127300--Sobic009G026400 Sobic002G060500 Sobic002G060500 Sobic005G127300--Sobic002G060500 Sobic003G156766 Sobic003G156766 Sobic005G127300--Sobic003G156766 Sobic010G046400--Sobic010G173900 Sobic010G046400--Sobic004G227500 Sobic010G046400--Sobic002G334600 Sobic002G218700 Sobic002G218700 Sobic010G046400--Sobic002G218700 Sobic007G070300 Sobic007G070300 Sobic010G046400--Sobic007G070300 Sobic002G367300 Sobic002G367300 Sobic010G046400--Sobic002G367300 Sobic009G011500 Sobic009G011500 Sobic010G046400--Sobic009G011500 Sobic010G046400--Sobic008G099500 Sobic001G247200 Sobic001G247200 Sobic010G046400--Sobic001G247200 Sobic008G000800--Sobic010G229000 Sobic004G053300 Sobic004G053300 Sobic008G000800--Sobic004G053300 Sobic008G000800--Sobic010G139301 Sobic008G000800--Sobic006G068400 Sobic003G432900 Sobic003G432900 Sobic008G000800--Sobic003G432900 Sobic008G000800--Sobic009G013100 Sobic008G000800--Sobic004G227500 Sobic001G305400 Sobic001G305400 Sobic008G000800--Sobic001G305400 Sobic003G277900 Sobic003G277900 Sobic008G000800--Sobic003G277900 Sobic003G359300 Sobic003G359300 Sobic007G195400--Sobic003G359300 Sobic004G061900 Sobic004G061900 Sobic007G195400--Sobic004G061900 Sobic008G034600 Sobic008G034600 Sobic007G195400--Sobic008G034600 Sobic007G191100 Sobic007G191100 Sobic007G195400--Sobic007G191100 Sobic006G129700 Sobic006G129700 Sobic007G195400--Sobic006G129700 Sobic003G093600 Sobic003G093600 Sobic007G195400--Sobic003G093600 Sobic001G216600 Sobic001G216600 Sobic007G195400--Sobic001G216600 Sobic002G058300 Sobic002G058300 Sobic007G195400--Sobic002G058300 Sobic003G115100 Sobic003G115100 Sobic007G195400--Sobic003G115100 Sobic004G088400 Sobic004G088400 Sobic007G130300--Sobic004G088400 Sobic007G008800 Sobic007G008800 Sobic007G130300--Sobic007G008800 Sobic003G026300 Sobic003G026300 Sobic007G130300--Sobic003G026300 Sobic002G177400 Sobic002G177400 Sobic007G130300--Sobic002G177400 Sobic010G269600 Sobic010G269600 Sobic007G130300--Sobic010G269600 Sobic002G362300 Sobic002G362300 Sobic007G130300--Sobic002G362300 Sobic009G030300 Sobic009G030300 Sobic007G130300--Sobic009G030300 Sobic003G346000 Sobic003G346000 Sobic007G130300--Sobic003G346000 Sobic007G063200 Sobic007G063200 Sobic007G130300--Sobic007G063200
Octagon: transcription factors


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