Gene annotation
Transcriptome id Sobic.003G445900.1
Synonym Sb03g047530
Functional annotation senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed
UniProt C5XJF5
Pfam PF07714 PF12819
Panther DB PTHR27003 PTHR27003:SF112
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G37050 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os12g01200.3 : senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a025806
Brachypodium KQK11832 , KQK11833 , PNT73706 , PNT73705
Barley HORVU3Hr1G117680.41 , HORVU3Hr1G117680.40 , HORVU3Hr1G117680.14 , HORVU3Hr1G117680.13 , HORVU3Hr1G117680.25 , HORVU3Hr1G117680.24 , HORVU3Hr1G117680.23 , HORVU3Hr1G117680.22 , HORVU3Hr1G117680.21 , HORVU3Hr1G117680.20 , HORVU3Hr1G117680.18 , HORVU3Hr1G117680.1 , HORVU3Hr1G117680.38 , HORVU3Hr1G117680.39 , HORVU3Hr1G117680.34 , HORVU3Hr1G117680.35 , HORVU3Hr1G117680.36 , HORVU3Hr1G117680.37 , HORVU3Hr1G117680.30 , HORVU3Hr1G117680.31 , HORVU3Hr1G117680.32 , HORVU3Hr1G117680.33 , HORVU3Hr1G117680.27 , HORVU3Hr1G117680.16 , HORVU3Hr1G117680.17 , HORVU3Hr1G117680.15 , HORVU3Hr1G117680.19 , HORVU3Hr1G117680.28 , HORVU3Hr1G117680.26 , HORVU3Hr1G117680.4 , HORVU3Hr1G117680.5 , HORVU3Hr1G117680.6 , HORVU3Hr1G117680.7 , HORVU3Hr1G117680.2 , HORVU3Hr1G117680.3 , HORVU3Hr1G117680.8 , HORVU3Hr1G117680.9
Wheat TraesCS3A02G538300 , TraesCS3B02G603800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G000800 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
2 Sobic.004G053300 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
3 Sobic.002G313500 protein kinase PKN/PRK1, effector, putative, expressed -
4 Sobic.010G017800 LMBR1 integral membrane protein, putative, expressed K14617: LMBR1 domain-containing protein 1
5 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
6 Sobic.003G432900 RNA recognition motif containing protein, putative, expressed -
7 Sobic.002G288000 bromodomain domain containing protein, expressed K11723: bromodomain-containing protein 7
8 Sobic.008G139700 bromodomain associated family protein, expressed K14649: transcription initiation factor TFIID subunit 8
9 Sobic.003G346000 IQ calmodulin-binding motif domain containing protein, expressed -
10 Sobic.008G020200 UDP-N-acetylglucosamine transferase subunit ALG14, putative, expressed K07441: beta-1,4-N-acetylglucosaminyltransferase
11 Sobic.004G227500 WD-40 repeat family protein, putative, expressed -
12 Sobic.004G048000 DUF292 domain containing protein, expressed -
13 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -
14 Sobic.004G061900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed K19347: SUN domain-containing protein 1/2
15 Sobic.004G054200 avr9/Cf-9 rapidly elicited protein 137, putative, expressed -
16 Sobic.001G267233 - -
17 Sobic.001G518400 EF hand family protein, putative, expressed -
18 Sobic.006G202200 ENTH domain containing protein, expressed K12471: epsin
19 Sobic.010G189000 protein with a conserved N-terminal region, putative, expressed -
20 Sobic.010G105701 - -


Gene co-expression network
sample Sobic003G445900 Sobic003G445900 Sobic008G000800 Sobic008G000800 Sobic003G445900--Sobic008G000800 Sobic004G053300 Sobic004G053300 Sobic003G445900--Sobic004G053300 Sobic002G313500 Sobic002G313500 Sobic003G445900--Sobic002G313500 Sobic010G017800 Sobic010G017800 Sobic003G445900--Sobic010G017800 Sobic007G191100 Sobic007G191100 Sobic003G445900--Sobic007G191100 Sobic003G432900 Sobic003G432900 Sobic003G445900--Sobic003G432900 Sobic002G288000 Sobic002G288000 Sobic003G445900--Sobic002G288000 Sobic008G139700 Sobic008G139700 Sobic003G445900--Sobic008G139700 Sobic003G346000 Sobic003G346000 Sobic003G445900--Sobic003G346000 Sobic010G229000 Sobic010G229000 Sobic008G000800--Sobic010G229000 Sobic008G000800--Sobic004G053300 Sobic010G139301 Sobic010G139301 Sobic008G000800--Sobic010G139301 Sobic006G068400 Sobic006G068400 Sobic008G000800--Sobic006G068400 Sobic008G000800--Sobic003G432900 Sobic009G013100 Sobic009G013100 Sobic008G000800--Sobic009G013100 Sobic004G227500 Sobic004G227500 Sobic008G000800--Sobic004G227500 Sobic001G305400 Sobic001G305400 Sobic008G000800--Sobic001G305400 Sobic003G277900 Sobic003G277900 Sobic008G000800--Sobic003G277900 Sobic004G053300--Sobic003G277900 Sobic004G053300--Sobic008G000800 Sobic005G159600 Sobic005G159600 Sobic004G053300--Sobic005G159600 Sobic008G099500 Sobic008G099500 Sobic004G053300--Sobic008G099500 Sobic001G494100 Sobic001G494100 Sobic004G053300--Sobic001G494100 Sobic004G053300--Sobic003G445900 Sobic004G053300--Sobic004G227500 Sobic004G054200 Sobic004G054200 Sobic004G053300--Sobic004G054200 Sobic008G086200 Sobic008G086200 Sobic004G053300--Sobic008G086200 Sobic001G143500 Sobic001G143500 Sobic002G313500--Sobic001G143500 Sobic001G371200 Sobic001G371200 Sobic002G313500--Sobic001G371200 Sobic004G350100 Sobic004G350100 Sobic002G313500--Sobic004G350100 Sobic002G378200 Sobic002G378200 Sobic002G313500--Sobic002G378200 Sobic004G283000 Sobic004G283000 Sobic002G313500--Sobic004G283000 Sobic002G313500--Sobic008G139700 Sobic004G007300 Sobic004G007300 Sobic002G313500--Sobic004G007300 Sobic001G466700 Sobic001G466700 Sobic002G313500--Sobic001G466700 Sobic002G313500--Sobic010G017800 Sobic010G017800--Sobic002G313500 Sobic001G518400 Sobic001G518400 Sobic010G017800--Sobic001G518400 Sobic010G017800--Sobic008G139700 Sobic001G335900 Sobic001G335900 Sobic010G017800--Sobic001G335900 Sobic009G229600 Sobic009G229600 Sobic010G017800--Sobic009G229600 Sobic004G325400 Sobic004G325400 Sobic010G017800--Sobic004G325400 Sobic005G216300 Sobic005G216300 Sobic010G017800--Sobic005G216300 Sobic010G017800--Sobic001G371200 Sobic003G340900 Sobic003G340900 Sobic010G017800--Sobic003G340900 Sobic004G061900 Sobic004G061900 Sobic007G191100--Sobic004G061900 Sobic002G076400 Sobic002G076400 Sobic007G191100--Sobic002G076400 Sobic008G034600 Sobic008G034600 Sobic007G191100--Sobic008G034600 Sobic010G077600 Sobic010G077600 Sobic007G191100--Sobic010G077600 Sobic010G263800 Sobic010G263800 Sobic007G191100--Sobic010G263800 Sobic007G011400 Sobic007G011400 Sobic007G191100--Sobic007G011400 Sobic010G074500 Sobic010G074500 Sobic007G191100--Sobic010G074500 Sobic003G093600 Sobic003G093600 Sobic007G191100--Sobic003G093600 Sobic008G117200 Sobic008G117200 Sobic007G191100--Sobic008G117200 Sobic004G246400 Sobic004G246400 Sobic003G432900--Sobic004G246400 Sobic003G374500 Sobic003G374500 Sobic003G432900--Sobic003G374500 Sobic003G432900--Sobic008G000800 Sobic003G432900--Sobic004G054200 Sobic003G432900--Sobic003G445900 Sobic003G432900--Sobic010G229000 Sobic001G278600 Sobic001G278600 Sobic003G432900--Sobic001G278600 Sobic008G065400 Sobic008G065400 Sobic003G432900--Sobic008G065400 Sobic010G101700 Sobic010G101700 Sobic003G432900--Sobic010G101700 Sobic006G138000 Sobic006G138000 Sobic002G288000--Sobic006G138000 Sobic010G189000 Sobic010G189000 Sobic002G288000--Sobic010G189000 Sobic006G183800 Sobic006G183800 Sobic002G288000--Sobic006G183800 Sobic002G288000--Sobic001G518400 Sobic003G401000 Sobic003G401000 Sobic002G288000--Sobic003G401000 Sobic002G423200 Sobic002G423200 Sobic002G288000--Sobic002G423200 Sobic001G094000 Sobic001G094000 Sobic002G288000--Sobic001G094000 Sobic002G288000--Sobic004G325400 Sobic006G028200 Sobic006G028200 Sobic002G288000--Sobic006G028200 Sobic008G139700--Sobic002G313500 Sobic008G139700--Sobic010G017800 Sobic001G080000 Sobic001G080000 Sobic008G139700--Sobic001G080000 Sobic008G139700--Sobic001G143500 Sobic002G180000 Sobic002G180000 Sobic008G139700--Sobic002G180000 Sobic003G045400 Sobic003G045400 Sobic008G139700--Sobic003G045400 Sobic007G205000 Sobic007G205000 Sobic008G139700--Sobic007G205000 Sobic006G267300 Sobic006G267300 Sobic008G139700--Sobic006G267300 Sobic010G105600 Sobic010G105600 Sobic008G139700--Sobic010G105600 Sobic002G049000 Sobic002G049000 Sobic003G346000--Sobic002G049000 Sobic003G346000--Sobic007G011400 Sobic003G346000--Sobic008G034600 Sobic002G313300 Sobic002G313300 Sobic003G346000--Sobic002G313300 Sobic002G151600 Sobic002G151600 Sobic003G346000--Sobic002G151600 Sobic004G088400 Sobic004G088400 Sobic003G346000--Sobic004G088400 Sobic007G008800 Sobic007G008800 Sobic003G346000--Sobic007G008800 Sobic002G177400 Sobic002G177400 Sobic003G346000--Sobic002G177400 Sobic004G005400 Sobic004G005400 Sobic003G346000--Sobic004G005400
Octagon: transcription factors


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