Gene annotation
Transcriptome id Sobic.002G105000.1
Synonym Sb02g008940
Functional annotation OsFBD15 - F-box and FBD domain containing protein, expressed
UniProt C5X3J2
Pfam PF08387
Panther DB PTHR32212:SF74 PTHR32212
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G66290 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os12g31340.1 : OsFBD15 - F-box and FBD domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G105000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
2 Sobic.001G215400 OsFBX387 - F-box domain containing protein, expressed -
3 Sobic.004G227500 WD-40 repeat family protein, putative, expressed -
4 Sobic.007G046900 MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
5 Sobic.006G022500 OsFBD9 - F-box and FBD domain containing protein, expressed -
6 Sobic.009G000400 expressed protein -
7 Sobic.006G180700 SNF2 family N-terminal domain containing protein, expressed K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
8 Sobic.004G347100 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
9 Sobic.003G412100 aspartokinase 3, chloroplast precursor, putative, expressed K00928: aspartate kinase
10 Sobic.005G154700 OsFBX407 - F-box domain containing protein, expressed -
11 Sobic.001G018100 "qTGW3/GL3.3/TGW3(Ortholog in rice:Hu et al., 2018/Xia et al., 2018/Ying et al., 2018 )"(PubMedID : 31659830)@CGMC_GSK.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
12 Sobic.006G028700 expressed protein -
13 Sobic.001G245900 expressed protein -
14 Sobic.002G427800 D-alanine--D-alanine ligase family, putative, expressed -
15 Sobic.004G148600 ankyrin, putative, expressed -
16 Sobic.006G091000 hydrolase, alpha/beta fold family domain containing protein, expressed K13617: protein phosphatase methylesterase 1
17 Sobic.009G022100 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
18 Sobic.010G235600 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
19 Sobic.006G022400 F-box/RNI-like/FBD-like domains-containing protein("PubMedID : 26759170,PubMedID : 24597475")@OsFBD9 - F-box and FBD domain containing protein, expressed -
20 Sobic.006G203400 "GS2/GL2(Ortholog in rice:Che et al., 2015(PubMedID : 31659900)@growth-regulating factor, putative, expressed -


Gene co-expression network
sample Sobic002G105000 Sobic002G105000 Sobic002G223300 Sobic002G223300 Sobic002G105000--Sobic002G223300 Sobic001G215400 Sobic001G215400 Sobic002G105000--Sobic001G215400 Sobic004G227500 Sobic004G227500 Sobic002G105000--Sobic004G227500 Sobic007G046900 Sobic007G046900 Sobic002G105000--Sobic007G046900 Sobic006G022500 Sobic006G022500 Sobic002G105000--Sobic006G022500 Sobic009G000400 Sobic009G000400 Sobic002G105000--Sobic009G000400 Sobic006G180700 Sobic006G180700 Sobic002G105000--Sobic006G180700 Sobic004G347100 Sobic004G347100 Sobic002G105000--Sobic004G347100 Sobic003G412100 Sobic003G412100 Sobic002G105000--Sobic003G412100 Sobic002G334600 Sobic002G334600 Sobic002G223300--Sobic002G334600 Sobic004G085300 Sobic004G085300 Sobic002G223300--Sobic004G085300 Sobic009G151200 Sobic009G151200 Sobic002G223300--Sobic009G151200 Sobic003G132700 Sobic003G132700 Sobic002G223300--Sobic003G132700 Sobic002G223300--Sobic007G046900 Sobic004G285000 Sobic004G285000 Sobic002G223300--Sobic004G285000 Sobic006G210200 Sobic006G210200 Sobic002G223300--Sobic006G210200 Sobic002G050500 Sobic002G050500 Sobic002G223300--Sobic002G050500 Sobic002G339800 Sobic002G339800 Sobic002G223300--Sobic002G339800 Sobic003G289400 Sobic003G289400 Sobic001G215400--Sobic003G289400 Sobic001G215400--Sobic009G151200 Sobic010G235600 Sobic010G235600 Sobic001G215400--Sobic010G235600 Sobic008G058800 Sobic008G058800 Sobic001G215400--Sobic008G058800 Sobic001G246500 Sobic001G246500 Sobic001G215400--Sobic001G246500 Sobic009G137100 Sobic009G137100 Sobic001G215400--Sobic009G137100 Sobic008G127400 Sobic008G127400 Sobic001G215400--Sobic008G127400 Sobic007G026000 Sobic007G026000 Sobic001G215400--Sobic007G026000 Sobic009G195200 Sobic009G195200 Sobic001G215400--Sobic009G195200 Sobic004G227500--Sobic006G022500 Sobic002G316500 Sobic002G316500 Sobic004G227500--Sobic002G316500 Sobic010G046400 Sobic010G046400 Sobic004G227500--Sobic010G046400 Sobic001G494100 Sobic001G494100 Sobic004G227500--Sobic001G494100 Sobic004G135500 Sobic004G135500 Sobic004G227500--Sobic004G135500 Sobic010G173900 Sobic010G173900 Sobic004G227500--Sobic010G173900 Sobic001G315400 Sobic001G315400 Sobic004G227500--Sobic001G315400 Sobic001G367100 Sobic001G367100 Sobic004G227500--Sobic001G367100 Sobic004G227500--Sobic002G334600 Sobic004G078100 Sobic004G078100 Sobic007G046900--Sobic004G078100 Sobic002G060450 Sobic002G060450 Sobic007G046900--Sobic002G060450 Sobic007G046900--Sobic002G223300 Sobic002G018600 Sobic002G018600 Sobic007G046900--Sobic002G018600 Sobic007G046900--Sobic001G215400 Sobic002G095700 Sobic002G095700 Sobic007G046900--Sobic002G095700 Sobic009G239301 Sobic009G239301 Sobic007G046900--Sobic009G239301 Sobic002G089900 Sobic002G089900 Sobic007G046900--Sobic002G089900 Sobic003G433500 Sobic003G433500 Sobic007G046900--Sobic003G433500 Sobic006G022500--Sobic004G227500 Sobic004G148600 Sobic004G148600 Sobic006G022500--Sobic004G148600 Sobic001G384600 Sobic001G384600 Sobic006G022500--Sobic001G384600 Sobic002G073300 Sobic002G073300 Sobic006G022500--Sobic002G073300 Sobic006G022500--Sobic002G060450 Sobic004G189700 Sobic004G189700 Sobic006G022500--Sobic004G189700 Sobic001G045700 Sobic001G045700 Sobic006G022500--Sobic001G045700 Sobic006G022400 Sobic006G022400 Sobic006G022500--Sobic006G022400 Sobic005G177900 Sobic005G177900 Sobic006G022500--Sobic005G177900 Sobic009G074700 Sobic009G074700 Sobic009G000400--Sobic009G074700 Sobic006G028700 Sobic006G028700 Sobic009G000400--Sobic006G028700 Sobic009G040800 Sobic009G040800 Sobic009G000400--Sobic009G040800 Sobic009G000400--Sobic006G180700 Sobic002G115500 Sobic002G115500 Sobic009G000400--Sobic002G115500 Sobic009G000400--Sobic007G026000 Sobic005G040900 Sobic005G040900 Sobic009G000400--Sobic005G040900 Sobic010G279900 Sobic010G279900 Sobic009G000400--Sobic010G279900 Sobic001G085700 Sobic001G085700 Sobic009G000400--Sobic001G085700 Sobic006G180700--Sobic009G074700 Sobic006G180700--Sobic001G085700 Sobic006G138000 Sobic006G138000 Sobic006G180700--Sobic006G138000 Sobic006G180700--Sobic009G040800 Sobic006G180700--Sobic009G000400 Sobic001G335900 Sobic001G335900 Sobic006G180700--Sobic001G335900 Sobic009G045200 Sobic009G045200 Sobic006G180700--Sobic009G045200 Sobic006G091000 Sobic006G091000 Sobic006G180700--Sobic006G091000 Sobic006G180700--Sobic005G040900 Sobic007G139400 Sobic007G139400 Sobic004G347100--Sobic007G139400 Sobic006G248500 Sobic006G248500 Sobic004G347100--Sobic006G248500 Sobic004G347100--Sobic006G091000 Sobic009G044900 Sobic009G044900 Sobic004G347100--Sobic009G044900 Sobic004G347100--Sobic005G040900 Sobic009G129600 Sobic009G129600 Sobic004G347100--Sobic009G129600 Sobic004G347100--Sobic009G151200 Sobic004G347100--Sobic009G040800 Sobic003G336800 Sobic003G336800 Sobic004G347100--Sobic003G336800 Sobic003G244700 Sobic003G244700 Sobic003G412100--Sobic003G244700 Sobic003G412100--Sobic002G334600 Sobic010G235500 Sobic010G235500 Sobic003G412100--Sobic010G235500 Sobic003G184400 Sobic003G184400 Sobic003G412100--Sobic003G184400 Sobic003G412100--Sobic005G040900 Sobic003G412100--Sobic002G105000 Sobic005G009200 Sobic005G009200 Sobic003G412100--Sobic005G009200 Sobic002G362300 Sobic002G362300 Sobic003G412100--Sobic002G362300 Sobic001G346700 Sobic001G346700 Sobic003G412100--Sobic001G346700
Octagon: transcription factors


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