Gene annotation
Transcriptome id Sobic.010G004400.1
Synonym ARC11, ATMIND1, MIND, Sb10g000600
Functional annotation septum site-determining protein minD, putative, expressed
UniProt Q45RR7
Pfam PF01656
Panther DB PTHR13696 PTHR13696:SF1
NCBI CDD KOG3022; Predicted ATPase, nucleotide-binding
KEGG Orthology K03609; septum site-determining protein MinD
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G24020 : septum site-determining protein (MIND)
RAP-DB (Rice) LOC_Os06g01690.1 : septum site-determining protein minD, putative, expressed
MaizeGDB (Corn) Zm00025a041166
Brachypodium KQK20041
Barley HORVU7Hr1G001800.2 , HORVU7Hr1G001800.1
Wheat TraesCS7A02G017400 , TraesCS7A02G017400 , TraesCS7D02G014700 , TraesCS4A02G474300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G227500 WD-40 repeat family protein, putative, expressed -
2 Sobic.010G277200 zinc knuckle domain containing protein, expressed K10904: TIMELESS-interacting protein
3 Sobic.007G000400 B3 DNA binding domain containing protein, expressed -
4 Sobic.007G219200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
5 Sobic.004G217900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide domain containing protein, putative, expressed -
6 Sobic.003G051500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
7 Sobic.001G187800 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
8 Sobic.001G261585 - -
9 Sobic.009G155400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
10 Sobic.002G316500 GRAS family transcription factor domain containing protein, expressed -
11 Sobic.008G109100 expressed protein -
12 Sobic.006G109400 pentatricopeptide, putative, expressed -
13 Sobic.004G135500 - -
14 Sobic.001G009400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
15 Sobic.002G365400 PPR repeat domain containing protein, putative, expressed -
16 Sobic.009G193850 - -
17 Sobic.003G128000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
18 Sobic.003G014766 - -
19 Sobic.003G027800 protein kinase family protein, putative, expressed -
20 Sobic.001G494100 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein


Gene co-expression network
sample Sobic010G004400 Sobic010G004400 Sobic004G227500 Sobic004G227500 Sobic010G004400--Sobic004G227500 Sobic010G277200 Sobic010G277200 Sobic010G004400--Sobic010G277200 Sobic007G000400 Sobic007G000400 Sobic010G004400--Sobic007G000400 Sobic007G219200 Sobic007G219200 Sobic010G004400--Sobic007G219200 Sobic004G217900 Sobic004G217900 Sobic010G004400--Sobic004G217900 Sobic003G051500 Sobic003G051500 Sobic010G004400--Sobic003G051500 Sobic001G187800 Sobic001G187800 Sobic010G004400--Sobic001G187800 Sobic001G261585 Sobic001G261585 Sobic010G004400--Sobic001G261585 Sobic009G155400 Sobic009G155400 Sobic010G004400--Sobic009G155400 Sobic006G022500 Sobic006G022500 Sobic004G227500--Sobic006G022500 Sobic002G316500 Sobic002G316500 Sobic004G227500--Sobic002G316500 Sobic010G046400 Sobic010G046400 Sobic004G227500--Sobic010G046400 Sobic001G494100 Sobic001G494100 Sobic004G227500--Sobic001G494100 Sobic004G135500 Sobic004G135500 Sobic004G227500--Sobic004G135500 Sobic010G173900 Sobic010G173900 Sobic004G227500--Sobic010G173900 Sobic001G315400 Sobic001G315400 Sobic004G227500--Sobic001G315400 Sobic001G367100 Sobic001G367100 Sobic004G227500--Sobic001G367100 Sobic002G334600 Sobic002G334600 Sobic004G227500--Sobic002G334600 Sobic007G038700 Sobic007G038700 Sobic010G277200--Sobic007G038700 Sobic003G153900 Sobic003G153900 Sobic010G277200--Sobic003G153900 Sobic009G148200 Sobic009G148200 Sobic010G277200--Sobic009G148200 Sobic004G199200 Sobic004G199200 Sobic010G277200--Sobic004G199200 Sobic001G408300 Sobic001G408300 Sobic010G277200--Sobic001G408300 Sobic008G169400 Sobic008G169400 Sobic010G277200--Sobic008G169400 Sobic007G031300 Sobic007G031300 Sobic010G277200--Sobic007G031300 Sobic006G109400 Sobic006G109400 Sobic010G277200--Sobic006G109400 Sobic003G351900 Sobic003G351900 Sobic010G277200--Sobic003G351900 Sobic008G056900 Sobic008G056900 Sobic007G000400--Sobic008G056900 Sobic001G522400 Sobic001G522400 Sobic007G000400--Sobic001G522400 Sobic006G242401 Sobic006G242401 Sobic007G000400--Sobic006G242401 Sobic001G045700 Sobic001G045700 Sobic007G000400--Sobic001G045700 Sobic009G096100 Sobic009G096100 Sobic007G000400--Sobic009G096100 Sobic002G380100 Sobic002G380100 Sobic007G000400--Sobic002G380100 Sobic004G128200 Sobic004G128200 Sobic007G000400--Sobic004G128200 Sobic003G163100 Sobic003G163100 Sobic007G000400--Sobic003G163100 Sobic010G143200 Sobic010G143200 Sobic007G000400--Sobic010G143200 Sobic002G219900 Sobic002G219900 Sobic007G219200--Sobic002G219900 Sobic001G115500 Sobic001G115500 Sobic007G219200--Sobic001G115500 Sobic003G027800 Sobic003G027800 Sobic007G219200--Sobic003G027800 Sobic004G249300 Sobic004G249300 Sobic007G219200--Sobic004G249300 Sobic003G077500 Sobic003G077500 Sobic007G219200--Sobic003G077500 Sobic008G125000 Sobic008G125000 Sobic007G219200--Sobic008G125000 Sobic001G435201 Sobic001G435201 Sobic007G219200--Sobic001G435201 Sobic001G382400 Sobic001G382400 Sobic007G219200--Sobic001G382400 Sobic002G394800 Sobic002G394800 Sobic007G219200--Sobic002G394800 Sobic004G217900--Sobic009G155400 Sobic008G163400 Sobic008G163400 Sobic004G217900--Sobic008G163400 Sobic009G116400 Sobic009G116400 Sobic004G217900--Sobic009G116400 Sobic004G217900--Sobic001G187800 Sobic008G099900 Sobic008G099900 Sobic004G217900--Sobic008G099900 Sobic004G217900--Sobic003G051500 Sobic004G241000 Sobic004G241000 Sobic004G217900--Sobic004G241000 Sobic010G190900 Sobic010G190900 Sobic004G217900--Sobic010G190900 Sobic001G149100 Sobic001G149100 Sobic004G217900--Sobic001G149100 Sobic001G391101 Sobic001G391101 Sobic003G051500--Sobic001G391101 Sobic001G001200 Sobic001G001200 Sobic003G051500--Sobic001G001200 Sobic005G028300 Sobic005G028300 Sobic003G051500--Sobic005G028300 Sobic001G040600 Sobic001G040600 Sobic003G051500--Sobic001G040600 Sobic001G081300 Sobic001G081300 Sobic003G051500--Sobic001G081300 Sobic003G419800 Sobic003G419800 Sobic003G051500--Sobic003G419800 Sobic007G182600 Sobic007G182600 Sobic003G051500--Sobic007G182600 Sobic010G099300 Sobic010G099300 Sobic003G051500--Sobic010G099300 Sobic003G051500--Sobic004G217900 Sobic001G009400 Sobic001G009400 Sobic001G187800--Sobic001G009400 Sobic001G187800--Sobic009G155400 Sobic001G448100 Sobic001G448100 Sobic001G187800--Sobic001G448100 Sobic006G111200 Sobic006G111200 Sobic001G187800--Sobic006G111200 Sobic001G187800--Sobic004G217900 Sobic006G262700 Sobic006G262700 Sobic001G187800--Sobic006G262700 Sobic009G108400 Sobic009G108400 Sobic001G187800--Sobic009G108400 Sobic001G347100 Sobic001G347100 Sobic001G187800--Sobic001G347100 Sobic005G011000 Sobic005G011000 Sobic001G187800--Sobic005G011000 Sobic001G088900 Sobic001G088900 Sobic001G261585--Sobic001G088900 Sobic009G253400 Sobic009G253400 Sobic001G261585--Sobic009G253400 Sobic003G420000 Sobic003G420000 Sobic001G261585--Sobic003G420000 Sobic001G261585--Sobic001G367100 Sobic009G235200 Sobic009G235200 Sobic001G261585--Sobic009G235200 Sobic006G059500 Sobic006G059500 Sobic001G261585--Sobic006G059500 Sobic005G168300 Sobic005G168300 Sobic001G261585--Sobic005G168300 Sobic007G030000 Sobic007G030000 Sobic001G261585--Sobic007G030000 Sobic001G261585--Sobic001G187800 Sobic009G155400--Sobic009G116400 Sobic009G155400--Sobic008G163400 Sobic009G155400--Sobic004G241000 Sobic006G085900 Sobic006G085900 Sobic009G155400--Sobic006G085900 Sobic009G155400--Sobic004G217900 Sobic006G069100 Sobic006G069100 Sobic009G155400--Sobic006G069100 Sobic002G172500 Sobic002G172500 Sobic009G155400--Sobic002G172500 Sobic009G155400--Sobic006G262700 Sobic005G210700 Sobic005G210700 Sobic009G155400--Sobic005G210700
Octagon: transcription factors


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