Gene annotation
Transcriptome id Sobic.003G014766.1
Synonym -
Functional annotation -
UniProt A0A1W0VVH5
Pfam PF00394
Panther DB PTHR11709 PTHR11709:SF91
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G39830 : Cupredoxin superfamily protein
RAP-DB (Rice) LOC_Os09g20090.1 : L-ascorbate oxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a035741
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G240900 pentatricopeptide, putative, expressed -
2 Sobic.001G334100 1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed K01814: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
3 Sobic.006G109400 pentatricopeptide, putative, expressed -
4 Sobic.006G208400 expressed protein K14318: nuclear pore complex protein Nup88
5 Sobic.010G032300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
6 Sobic.003G009400 - -
7 Sobic.005G059400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized PPR-repeat protein, putative, expressed -
8 Sobic.002G427300 protein phosphotase protein, putative, expressed -
9 Sobic.004G038100 expressed protein K14303: NUP160, nuclear pore complex protein Nup160
10 Sobic.001G097400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphatidylinositol kinase, putative, expressed -
11 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
12 Sobic.005G199200 nuclear pore protein 84/107 containing protein, expressed K14301: NUP107, nuclear pore complex protein Nup107
13 Sobic.004G027500 ruvB-like, putative, expressed K04499: RUVBL1, RVB1, RuvB-like protein 1 (pontin 52)
14 Sobic.002G423400 PPR repeat containing protein, expressed -
15 Sobic.001G408300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.004G128200 Probable LRR receptor-like serine/threonine-protein kinase At5g10290(PubMedID : 31721651)@BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
17 Sobic.010G224700 - K17680: twinkle protein
18 Sobic.001G373000 nucleoporin interacting component, putative, expressed K14309: NUP93, nuclear pore complex protein Nup93
19 Sobic.007G069700 gar2, putative, expressed K11294: NCL, nucleolin
20 Sobic.001G149100 vegetative storage protein, putative, expressed -


Gene co-expression network
sample Sobic003G014766 Sobic003G014766 Sobic002G240900 Sobic002G240900 Sobic003G014766--Sobic002G240900 Sobic001G334100 Sobic001G334100 Sobic003G014766--Sobic001G334100 Sobic006G109400 Sobic006G109400 Sobic003G014766--Sobic006G109400 Sobic006G208400 Sobic006G208400 Sobic003G014766--Sobic006G208400 Sobic010G032300 Sobic010G032300 Sobic003G014766--Sobic010G032300 Sobic003G009400 Sobic003G009400 Sobic003G014766--Sobic003G009400 Sobic005G059400 Sobic005G059400 Sobic003G014766--Sobic005G059400 Sobic002G427300 Sobic002G427300 Sobic003G014766--Sobic002G427300 Sobic004G038100 Sobic004G038100 Sobic003G014766--Sobic004G038100 Sobic001G149100 Sobic001G149100 Sobic002G240900--Sobic001G149100 Sobic003G419800 Sobic003G419800 Sobic002G240900--Sobic003G419800 Sobic002G389200 Sobic002G389200 Sobic002G240900--Sobic002G389200 Sobic002G240900--Sobic003G014766 Sobic002G240900--Sobic005G059400 Sobic003G051500 Sobic003G051500 Sobic002G240900--Sobic003G051500 Sobic001G001200 Sobic001G001200 Sobic002G240900--Sobic001G001200 Sobic005G028300 Sobic005G028300 Sobic002G240900--Sobic005G028300 Sobic001G390900 Sobic001G390900 Sobic002G240900--Sobic001G390900 Sobic007G143500 Sobic007G143500 Sobic001G334100--Sobic007G143500 Sobic003G184400 Sobic003G184400 Sobic001G334100--Sobic003G184400 Sobic005G199200 Sobic005G199200 Sobic001G334100--Sobic005G199200 Sobic003G259600 Sobic003G259600 Sobic001G334100--Sobic003G259600 Sobic001G334100--Sobic005G059400 Sobic002G142600 Sobic002G142600 Sobic001G334100--Sobic002G142600 Sobic006G180700 Sobic006G180700 Sobic001G334100--Sobic006G180700 Sobic004G067400 Sobic004G067400 Sobic001G334100--Sobic004G067400 Sobic005G000300 Sobic005G000300 Sobic001G334100--Sobic005G000300 Sobic007G030000 Sobic007G030000 Sobic006G109400--Sobic007G030000 Sobic001G347100 Sobic001G347100 Sobic006G109400--Sobic001G347100 Sobic008G099900 Sobic008G099900 Sobic006G109400--Sobic008G099900 Sobic006G069100 Sobic006G069100 Sobic006G109400--Sobic006G069100 Sobic001G408300 Sobic001G408300 Sobic006G109400--Sobic001G408300 Sobic010G038800 Sobic010G038800 Sobic006G109400--Sobic010G038800 Sobic010G277200 Sobic010G277200 Sobic006G109400--Sobic010G277200 Sobic009G155400 Sobic009G155400 Sobic006G109400--Sobic009G155400 Sobic005G210700 Sobic005G210700 Sobic006G109400--Sobic005G210700 Sobic004G354000 Sobic004G354000 Sobic006G208400--Sobic004G354000 Sobic010G236600 Sobic010G236600 Sobic006G208400--Sobic010G236600 Sobic008G017100 Sobic008G017100 Sobic006G208400--Sobic008G017100 Sobic010G224700 Sobic010G224700 Sobic006G208400--Sobic010G224700 Sobic006G208400--Sobic001G408300 Sobic001G460500 Sobic001G460500 Sobic006G208400--Sobic001G460500 Sobic002G423400 Sobic002G423400 Sobic006G208400--Sobic002G423400 Sobic006G208400--Sobic002G427300 Sobic003G314700 Sobic003G314700 Sobic006G208400--Sobic003G314700 Sobic004G342300 Sobic004G342300 Sobic010G032300--Sobic004G342300 Sobic006G140400 Sobic006G140400 Sobic010G032300--Sobic006G140400 Sobic006G274100 Sobic006G274100 Sobic010G032300--Sobic006G274100 Sobic010G032300--Sobic010G224700 Sobic006G059500 Sobic006G059500 Sobic010G032300--Sobic006G059500 Sobic002G132600 Sobic002G132600 Sobic010G032300--Sobic002G132600 Sobic009G211200 Sobic009G211200 Sobic010G032300--Sobic009G211200 Sobic010G032300--Sobic003G259600 Sobic010G032300--Sobic005G028300 Sobic003G009400--Sobic003G014766 Sobic006G212500 Sobic006G212500 Sobic003G009400--Sobic006G212500 Sobic003G009400--Sobic001G334100 Sobic004G025100 Sobic004G025100 Sobic003G009400--Sobic004G025100 Sobic008G039401 Sobic008G039401 Sobic003G009400--Sobic008G039401 Sobic002G183300 Sobic002G183300 Sobic003G009400--Sobic002G183300 Sobic003G009400--Sobic002G240900 Sobic009G116400 Sobic009G116400 Sobic003G009400--Sobic009G116400 Sobic003G009400--Sobic009G155400 Sobic005G059400--Sobic001G334100 Sobic005G059400--Sobic003G259600 Sobic002G218700 Sobic002G218700 Sobic005G059400--Sobic002G218700 Sobic005G059400--Sobic001G347100 Sobic005G059400--Sobic006G180700 Sobic005G059400--Sobic005G199200 Sobic004G036700 Sobic004G036700 Sobic005G059400--Sobic004G036700 Sobic005G059400--Sobic002G132600 Sobic005G059400--Sobic003G184400 Sobic002G427300--Sobic006G208400 Sobic001G119800 Sobic001G119800 Sobic002G427300--Sobic001G119800 Sobic006G281000 Sobic006G281000 Sobic002G427300--Sobic006G281000 Sobic006G140600 Sobic006G140600 Sobic002G427300--Sobic006G140600 Sobic010G085200 Sobic010G085200 Sobic002G427300--Sobic010G085200 Sobic004G006700 Sobic004G006700 Sobic002G427300--Sobic004G006700 Sobic002G427300--Sobic003G314700 Sobic002G427300--Sobic001G460500 Sobic001G036800 Sobic001G036800 Sobic002G427300--Sobic001G036800 Sobic006G033101 Sobic006G033101 Sobic004G038100--Sobic006G033101 Sobic006G181800 Sobic006G181800 Sobic004G038100--Sobic006G181800 Sobic001G373000 Sobic001G373000 Sobic004G038100--Sobic001G373000 Sobic004G215900 Sobic004G215900 Sobic004G038100--Sobic004G215900 Sobic010G188000 Sobic010G188000 Sobic004G038100--Sobic010G188000 Sobic004G038100--Sobic003G259600 Sobic001G373800 Sobic001G373800 Sobic004G038100--Sobic001G373800 Sobic006G280100 Sobic006G280100 Sobic004G038100--Sobic006G280100 Sobic009G104900 Sobic009G104900 Sobic004G038100--Sobic009G104900
Octagon: transcription factors


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