Gene annotation
Transcriptome id Sobic.001G187800.6,Sobic.001G187800.1,Sobic.001G187800.3,Sobic.001G187800.5,Sobic.001G187800.4
Synonym Sb01g016500
Functional annotation aldose 1-epimerase, putative, expressed
UniProt C5WV75 , A0A1Z5S6B8
Pfam PF01263
Panther DB PTHR10091 PTHR10091:SF8
NCBI CDD KOG1604; Predicted mutarotase
KEGG Orthology K01785; galM, aldose 1-epimerase
Gene Ontology GO:0016853; isomerase activity GO:0005975carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT3G17940 : Galactose mutarotase-like superfamily protein
RAP-DB (Rice) LOC_Os10g06720.1 : aldose 1-epimerase, putative, expressed
MaizeGDB (Corn) Zm00025a017388
Brachypodium KQK14372 , PNT74498
Barley HORVU7Hr1G035630.10 , HORVU7Hr1G035630.11 , HORVU7Hr1G035630.12 , HORVU7Hr1G035630.13 , HORVU7Hr1G035630.14 , HORVU7Hr1G035630.8 , HORVU7Hr1G035630.9 , HORVU7Hr1G035630.2 , HORVU7Hr1G035630.3 , HORVU7Hr1G035630.1 , HORVU7Hr1G035630.6 , HORVU7Hr1G035630.7 , HORVU7Hr1G035630.4 , HORVU7Hr1G035630.5
Wheat TraesCS7A02G171700 , TraesCS7D02G172200 , TraesCS7B02G076500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G009400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
2 Sobic.009G155400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
3 Sobic.001G448100 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
4 Sobic.006G111200 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
5 Sobic.004G217900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide domain containing protein, putative, expressed -
6 Sobic.006G262700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phytosulfokine receptor precursor, putative, expressed -
7 Sobic.009G108400 CAAX amino terminal protease family protein, putative, expressed K08658: RCE1, prenyl protein peptidase
8 Sobic.001G347100 tetratricopeptide-like helical, putative, expressed -
9 Sobic.005G011000 Rf1, mitochondrial precursor, putative, expressed -
10 Sobic.002G380100 PPR repeat containing protein, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
11 Sobic.007G077700 expressed protein -
12 Sobic.003G067201 - -
13 Sobic.009G116400 pentatricopeptide, putative, expressed -
14 Sobic.002G218700 mitochondrial carrier protein, putative, expressed K15121: solute carrier family 25, member 44
15 Sobic.007G090701 - -
16 Sobic.010G046400 glyoxalase/bleomycin resistance protein/dioxygenase, putative, expressed -
17 Sobic.003G412100 aspartokinase 3, chloroplast precursor, putative, expressed K00928: aspartate kinase
18 Sobic.009G213100 beta-galactosidase 8 precursor, putative, expressed K12309: GLB1, beta-galactosidase
19 Sobic.003G420000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat domain containing protein, putative, expressed -
20 Sobic.003G419800 pentatricopeptide repeat protein PPR1106-17, putative, expressed -


Gene co-expression network
sample Sobic001G187800 Sobic001G187800 Sobic001G009400 Sobic001G009400 Sobic001G187800--Sobic001G009400 Sobic009G155400 Sobic009G155400 Sobic001G187800--Sobic009G155400 Sobic001G448100 Sobic001G448100 Sobic001G187800--Sobic001G448100 Sobic006G111200 Sobic006G111200 Sobic001G187800--Sobic006G111200 Sobic004G217900 Sobic004G217900 Sobic001G187800--Sobic004G217900 Sobic006G262700 Sobic006G262700 Sobic001G187800--Sobic006G262700 Sobic009G108400 Sobic009G108400 Sobic001G187800--Sobic009G108400 Sobic001G347100 Sobic001G347100 Sobic001G187800--Sobic001G347100 Sobic005G011000 Sobic005G011000 Sobic001G187800--Sobic005G011000 Sobic001G009400--Sobic001G187800 Sobic001G009400--Sobic009G155400 Sobic003G128000 Sobic003G128000 Sobic001G009400--Sobic003G128000 Sobic009G096100 Sobic009G096100 Sobic001G009400--Sobic009G096100 Sobic007G090701 Sobic007G090701 Sobic001G009400--Sobic007G090701 Sobic001G009400--Sobic004G217900 Sobic003G419800 Sobic003G419800 Sobic001G009400--Sobic003G419800 Sobic009G116400 Sobic009G116400 Sobic001G009400--Sobic009G116400 Sobic001G391101 Sobic001G391101 Sobic001G009400--Sobic001G391101 Sobic009G155400--Sobic009G116400 Sobic008G163400 Sobic008G163400 Sobic009G155400--Sobic008G163400 Sobic004G241000 Sobic004G241000 Sobic009G155400--Sobic004G241000 Sobic006G085900 Sobic006G085900 Sobic009G155400--Sobic006G085900 Sobic009G155400--Sobic004G217900 Sobic006G069100 Sobic006G069100 Sobic009G155400--Sobic006G069100 Sobic002G172500 Sobic002G172500 Sobic009G155400--Sobic002G172500 Sobic009G155400--Sobic006G262700 Sobic005G210700 Sobic005G210700 Sobic009G155400--Sobic005G210700 Sobic002G079100 Sobic002G079100 Sobic001G448100--Sobic002G079100 Sobic003G397100 Sobic003G397100 Sobic001G448100--Sobic003G397100 Sobic004G007900 Sobic004G007900 Sobic001G448100--Sobic004G007900 Sobic002G235900 Sobic002G235900 Sobic001G448100--Sobic002G235900 Sobic002G380100 Sobic002G380100 Sobic001G448100--Sobic002G380100 Sobic009G154900 Sobic009G154900 Sobic001G448100--Sobic009G154900 Sobic001G522400 Sobic001G522400 Sobic001G448100--Sobic001G522400 Sobic009G000400 Sobic009G000400 Sobic001G448100--Sobic009G000400 Sobic003G067201 Sobic003G067201 Sobic001G448100--Sobic003G067201 Sobic001G453500 Sobic001G453500 Sobic006G111200--Sobic001G453500 Sobic004G151000 Sobic004G151000 Sobic006G111200--Sobic004G151000 Sobic001G368300 Sobic001G368300 Sobic006G111200--Sobic001G368300 Sobic007G060600 Sobic007G060600 Sobic006G111200--Sobic007G060600 Sobic001G049800 Sobic001G049800 Sobic006G111200--Sobic001G049800 Sobic006G271900 Sobic006G271900 Sobic006G111200--Sobic006G271900 Sobic006G111200--Sobic002G380100 Sobic006G059500 Sobic006G059500 Sobic006G111200--Sobic006G059500 Sobic007G059700 Sobic007G059700 Sobic006G111200--Sobic007G059700 Sobic004G217900--Sobic009G155400 Sobic004G217900--Sobic008G163400 Sobic004G217900--Sobic009G116400 Sobic004G217900--Sobic001G187800 Sobic008G099900 Sobic008G099900 Sobic004G217900--Sobic008G099900 Sobic003G051500 Sobic003G051500 Sobic004G217900--Sobic003G051500 Sobic004G217900--Sobic004G241000 Sobic010G190900 Sobic010G190900 Sobic004G217900--Sobic010G190900 Sobic001G149100 Sobic001G149100 Sobic004G217900--Sobic001G149100 Sobic006G262700--Sobic009G116400 Sobic001G242300 Sobic001G242300 Sobic006G262700--Sobic001G242300 Sobic006G262700--Sobic009G155400 Sobic006G262700--Sobic008G163400 Sobic004G256900 Sobic004G256900 Sobic006G262700--Sobic004G256900 Sobic010G068900 Sobic010G068900 Sobic006G262700--Sobic010G068900 Sobic006G262700--Sobic010G190900 Sobic006G262700--Sobic004G241000 Sobic007G087900 Sobic007G087900 Sobic006G262700--Sobic007G087900 Sobic009G040800 Sobic009G040800 Sobic009G108400--Sobic009G040800 Sobic001G335900 Sobic001G335900 Sobic009G108400--Sobic001G335900 Sobic009G108400--Sobic009G154900 Sobic001G012900 Sobic001G012900 Sobic009G108400--Sobic001G012900 Sobic001G247200 Sobic001G247200 Sobic009G108400--Sobic001G247200 Sobic006G091000 Sobic006G091000 Sobic009G108400--Sobic006G091000 Sobic003G205100 Sobic003G205100 Sobic009G108400--Sobic003G205100 Sobic009G108400--Sobic004G007900 Sobic010G172400 Sobic010G172400 Sobic009G108400--Sobic010G172400 Sobic001G347100--Sobic001G149100 Sobic001G347100--Sobic001G391101 Sobic001G081300 Sobic001G081300 Sobic001G347100--Sobic001G081300 Sobic009G238700 Sobic009G238700 Sobic001G347100--Sobic009G238700 Sobic007G179600 Sobic007G179600 Sobic001G347100--Sobic007G179600 Sobic003G299200 Sobic003G299200 Sobic001G347100--Sobic003G299200 Sobic001G347100--Sobic004G241000 Sobic001G347100--Sobic006G069100 Sobic001G347100--Sobic009G155400 Sobic005G011000--Sobic006G271900 Sobic005G011000--Sobic009G116400 Sobic004G036700 Sobic004G036700 Sobic005G011000--Sobic004G036700 Sobic005G011000--Sobic001G347100 Sobic005G011000--Sobic005G210700 Sobic005G011000--Sobic001G187800 Sobic005G011000--Sobic003G419800 Sobic002G389200 Sobic002G389200 Sobic005G011000--Sobic002G389200 Sobic005G028300 Sobic005G028300 Sobic005G011000--Sobic005G028300
Octagon: transcription factors


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