Gene annotation
Transcriptome id Sobic.006G262700.1
Synonym Sb06g032550, PSKR1, ATPSKR1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
phytosulfokine receptor precursor, putative, expressed
UniProt A0A1Z5RFJ6
Pfam PF08263 PF00560 PF13855
Panther DB PTHR27000 PTHR27000:SF159
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G02220 : phytosulfokin receptor 1
RAP-DB (Rice) LOC_Os04g57660.1 : phytosulfokine receptor precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ85237
Barley HORVU2Hr1G120630.16 , HORVU2Hr1G120630.17
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G116400 pentatricopeptide, putative, expressed -
2 Sobic.001G242300 expressed protein -
3 Sobic.009G155400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
4 Sobic.008G163400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
5 Sobic.004G256900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
6 Sobic.010G068900 glutamate receptor 2.6 precursor, putative, expressed K05387: glutamate receptor, ionotropic, plant
7 Sobic.010G190900 pentatricopeptide, putative, expressed -
8 Sobic.004G241000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
9 Sobic.007G087900 Rf1, mitochondrial precursor, putative, expressed -
10 Sobic.004G194100 expressed protein -
11 Sobic.010G153000 expressed protein -
12 Sobic.001G478900 pentatricopeptide, putative, expressed -
13 Sobic.006G237500 PPR repeat domain containing protein, putative, expressed -
14 Sobic.009G253101 - -
15 Sobic.006G085900 pentatricopeptide, putative, expressed -
16 Sobic.006G069100 pentatricopeptide, putative, expressed -
17 Sobic.002G172500 tetratricopeptide-like helical, putative, expressed -
18 Sobic.004G215600 - K15271: HFM1, ATP-dependent DNA helicase HFM1/MER3
19 Sobic.008G082800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
20 Sobic.006G262800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic006G262700 Sobic006G262700 Sobic009G116400 Sobic009G116400 Sobic006G262700--Sobic009G116400 Sobic001G242300 Sobic001G242300 Sobic006G262700--Sobic001G242300 Sobic009G155400 Sobic009G155400 Sobic006G262700--Sobic009G155400 Sobic008G163400 Sobic008G163400 Sobic006G262700--Sobic008G163400 Sobic004G256900 Sobic004G256900 Sobic006G262700--Sobic004G256900 Sobic010G068900 Sobic010G068900 Sobic006G262700--Sobic010G068900 Sobic010G190900 Sobic010G190900 Sobic006G262700--Sobic010G190900 Sobic004G241000 Sobic004G241000 Sobic006G262700--Sobic004G241000 Sobic007G087900 Sobic007G087900 Sobic006G262700--Sobic007G087900 Sobic009G116400--Sobic009G155400 Sobic009G116400--Sobic006G262700 Sobic009G116400--Sobic008G163400 Sobic009G116400--Sobic010G190900 Sobic009G116400--Sobic007G087900 Sobic006G069100 Sobic006G069100 Sobic009G116400--Sobic006G069100 Sobic005G210700 Sobic005G210700 Sobic009G116400--Sobic005G210700 Sobic004G346200 Sobic004G346200 Sobic009G116400--Sobic004G346200 Sobic009G116400--Sobic004G241000 Sobic003G397100 Sobic003G397100 Sobic001G242300--Sobic003G397100 Sobic001G242300--Sobic006G262700 Sobic002G123600 Sobic002G123600 Sobic001G242300--Sobic002G123600 Sobic001G242300--Sobic004G256900 Sobic008G169400 Sobic008G169400 Sobic001G242300--Sobic008G169400 Sobic003G331000 Sobic003G331000 Sobic001G242300--Sobic003G331000 Sobic001G361200 Sobic001G361200 Sobic001G242300--Sobic001G361200 Sobic009G120400 Sobic009G120400 Sobic001G242300--Sobic009G120400 Sobic006G237500 Sobic006G237500 Sobic001G242300--Sobic006G237500 Sobic009G155400--Sobic009G116400 Sobic009G155400--Sobic008G163400 Sobic009G155400--Sobic004G241000 Sobic006G085900 Sobic006G085900 Sobic009G155400--Sobic006G085900 Sobic004G217900 Sobic004G217900 Sobic009G155400--Sobic004G217900 Sobic009G155400--Sobic006G069100 Sobic002G172500 Sobic002G172500 Sobic009G155400--Sobic002G172500 Sobic009G155400--Sobic006G262700 Sobic009G155400--Sobic005G210700 Sobic003G239000 Sobic003G239000 Sobic008G163400--Sobic003G239000 Sobic008G163400--Sobic004G241000 Sobic008G163400--Sobic009G155400 Sobic008G163400--Sobic009G116400 Sobic008G163400--Sobic004G256900 Sobic006G262800 Sobic006G262800 Sobic008G163400--Sobic006G262800 Sobic001G122200 Sobic001G122200 Sobic008G163400--Sobic001G122200 Sobic002G267600 Sobic002G267600 Sobic008G163400--Sobic002G267600 Sobic001G149100 Sobic001G149100 Sobic008G163400--Sobic001G149100 Sobic003G184300 Sobic003G184300 Sobic004G256900--Sobic003G184300 Sobic004G256900--Sobic004G241000 Sobic004G256900--Sobic010G068900 Sobic004G256900--Sobic002G172500 Sobic004G256900--Sobic006G069100 Sobic004G256900--Sobic006G262800 Sobic004G256900--Sobic010G190900 Sobic001G478900 Sobic001G478900 Sobic004G256900--Sobic001G478900 Sobic004G256900--Sobic008G163400 Sobic010G068900--Sobic002G172500 Sobic010G068900--Sobic004G256900 Sobic010G068900--Sobic006G262800 Sobic010G068900--Sobic010G190900 Sobic010G068900--Sobic004G241000 Sobic010G068900--Sobic006G069100 Sobic010G068900--Sobic006G085900 Sobic010G068900--Sobic003G184300 Sobic010G068900--Sobic001G478900 Sobic010G190900--Sobic010G068900 Sobic010G190900--Sobic004G241000 Sobic010G190900--Sobic006G069100 Sobic010G190900--Sobic004G256900 Sobic009G253101 Sobic009G253101 Sobic010G190900--Sobic009G253101 Sobic010G190900--Sobic009G116400 Sobic010G190900--Sobic009G155400 Sobic010G190900--Sobic007G087900 Sobic010G190900--Sobic002G172500 Sobic004G241000--Sobic008G163400 Sobic004G241000--Sobic004G256900 Sobic004G241000--Sobic006G069100 Sobic004G241000--Sobic010G190900 Sobic004G241000--Sobic010G068900 Sobic004G241000--Sobic003G239000 Sobic004G241000--Sobic006G085900 Sobic004G241000--Sobic002G172500 Sobic004G241000--Sobic009G155400 Sobic007G087900--Sobic009G116400 Sobic007G087900--Sobic006G069100 Sobic007G087900--Sobic010G190900 Sobic007G087900--Sobic010G068900 Sobic007G087900--Sobic006G262700 Sobic007G087900--Sobic006G085900 Sobic007G087900--Sobic004G241000 Sobic007G087900--Sobic006G262800 Sobic007G087900--Sobic004G256900
Octagon: transcription factors


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