Gene annotation
Transcriptome id Sobic.008G082800.2,Sobic.008G082800.1
Synonym Sb08g008260, SLO1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
pentatricopeptide, putative, expressed
UniProt C5YTZ6 , A0A1Z5R5C7
Pfam PF13041 PF01535
Panther DB PTHR24015 PTHR24015:SF514
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G22410 : SLOW GROWTH 1
RAP-DB (Rice) LOC_Os12g13110.1 : pentatricopeptide, putative, expressed
MaizeGDB (Corn) Zm00025a042407
Brachypodium KQJ91779
Barley HORVU7Hr1G021750.1 , HORVU7Hr1G021750.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G172500 tetratricopeptide-like helical, putative, expressed -
2 Sobic.004G256900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
3 Sobic.001G478900 pentatricopeptide, putative, expressed -
4 Sobic.003G184300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.010G068900 glutamate receptor 2.6 precursor, putative, expressed K05387: glutamate receptor, ionotropic, plant
6 Sobic.009G155400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
7 Sobic.006G085900 pentatricopeptide, putative, expressed -
8 Sobic.009G063500 OsWAK75 - OsWAK receptor-like protein kinase, expressed -
9 Sobic.006G262800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
10 Sobic.004G241000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.009G116400 pentatricopeptide, putative, expressed -
12 Sobic.006G262700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phytosulfokine receptor precursor, putative, expressed -
13 Sobic.010G190900 pentatricopeptide, putative, expressed -
14 Sobic.009G253101 - -
15 Sobic.001G242300 expressed protein -
16 Sobic.008G163400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
17 Sobic.004G346200 tetratricopeptide-like helical, putative, expressed -
18 Sobic.006G085800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
19 Sobic.006G069100 pentatricopeptide, putative, expressed -
20 Sobic.006G237500 PPR repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G082800 Sobic008G082800 Sobic002G172500 Sobic002G172500 Sobic008G082800--Sobic002G172500 Sobic004G256900 Sobic004G256900 Sobic008G082800--Sobic004G256900 Sobic001G478900 Sobic001G478900 Sobic008G082800--Sobic001G478900 Sobic003G184300 Sobic003G184300 Sobic008G082800--Sobic003G184300 Sobic010G068900 Sobic010G068900 Sobic008G082800--Sobic010G068900 Sobic009G155400 Sobic009G155400 Sobic008G082800--Sobic009G155400 Sobic006G085900 Sobic006G085900 Sobic008G082800--Sobic006G085900 Sobic009G063500 Sobic009G063500 Sobic008G082800--Sobic009G063500 Sobic006G262800 Sobic006G262800 Sobic008G082800--Sobic006G262800 Sobic002G172500--Sobic010G068900 Sobic002G172500--Sobic008G082800 Sobic002G172500--Sobic004G256900 Sobic002G172500--Sobic006G262800 Sobic004G241000 Sobic004G241000 Sobic002G172500--Sobic004G241000 Sobic002G172500--Sobic006G085900 Sobic002G172500--Sobic009G155400 Sobic002G172500--Sobic003G184300 Sobic008G163400 Sobic008G163400 Sobic002G172500--Sobic008G163400 Sobic004G256900--Sobic003G184300 Sobic004G256900--Sobic004G241000 Sobic004G256900--Sobic010G068900 Sobic004G256900--Sobic002G172500 Sobic006G069100 Sobic006G069100 Sobic004G256900--Sobic006G069100 Sobic004G256900--Sobic006G262800 Sobic010G190900 Sobic010G190900 Sobic004G256900--Sobic010G190900 Sobic004G256900--Sobic001G478900 Sobic004G256900--Sobic008G163400 Sobic008G095900 Sobic008G095900 Sobic001G478900--Sobic008G095900 Sobic001G478900--Sobic006G262800 Sobic001G478900--Sobic004G256900 Sobic001G478900--Sobic003G184300 Sobic009G047700 Sobic009G047700 Sobic001G478900--Sobic009G047700 Sobic004G051600 Sobic004G051600 Sobic001G478900--Sobic004G051600 Sobic001G478900--Sobic010G068900 Sobic009G253101 Sobic009G253101 Sobic001G478900--Sobic009G253101 Sobic010G123100 Sobic010G123100 Sobic001G478900--Sobic010G123100 Sobic003G184300--Sobic004G256900 Sobic006G095000 Sobic006G095000 Sobic003G184300--Sobic006G095000 Sobic002G192900 Sobic002G192900 Sobic003G184300--Sobic002G192900 Sobic001G361200 Sobic001G361200 Sobic003G184300--Sobic001G361200 Sobic003G184300--Sobic001G478900 Sobic003G184300--Sobic010G068900 Sobic003G184300--Sobic002G172500 Sobic010G188900 Sobic010G188900 Sobic003G184300--Sobic010G188900 Sobic004G064600 Sobic004G064600 Sobic003G184300--Sobic004G064600 Sobic010G068900--Sobic002G172500 Sobic010G068900--Sobic004G256900 Sobic010G068900--Sobic006G262800 Sobic010G068900--Sobic010G190900 Sobic010G068900--Sobic004G241000 Sobic010G068900--Sobic006G069100 Sobic010G068900--Sobic006G085900 Sobic010G068900--Sobic003G184300 Sobic010G068900--Sobic001G478900 Sobic009G116400 Sobic009G116400 Sobic009G155400--Sobic009G116400 Sobic009G155400--Sobic008G163400 Sobic009G155400--Sobic004G241000 Sobic009G155400--Sobic006G085900 Sobic004G217900 Sobic004G217900 Sobic009G155400--Sobic004G217900 Sobic009G155400--Sobic006G069100 Sobic009G155400--Sobic002G172500 Sobic006G262700 Sobic006G262700 Sobic009G155400--Sobic006G262700 Sobic005G210700 Sobic005G210700 Sobic009G155400--Sobic005G210700 Sobic006G085900--Sobic004G241000 Sobic006G085900--Sobic010G068900 Sobic006G085900--Sobic009G155400 Sobic006G085900--Sobic006G069100 Sobic006G085900--Sobic002G172500 Sobic008G099900 Sobic008G099900 Sobic006G085900--Sobic008G099900 Sobic002G084400 Sobic002G084400 Sobic006G085900--Sobic002G084400 Sobic001G436600 Sobic001G436600 Sobic006G085900--Sobic001G436600 Sobic006G085900--Sobic005G210700 Sobic001G242300 Sobic001G242300 Sobic009G063500--Sobic001G242300 Sobic009G063500--Sobic008G082800 Sobic008G031200 Sobic008G031200 Sobic009G063500--Sobic008G031200 Sobic009G063500--Sobic006G085900 Sobic008G169400 Sobic008G169400 Sobic009G063500--Sobic008G169400 Sobic009G063500--Sobic006G262700 Sobic003G397100 Sobic003G397100 Sobic009G063500--Sobic003G397100 Sobic009G063500--Sobic004G241000 Sobic010G143600 Sobic010G143600 Sobic009G063500--Sobic010G143600 Sobic006G262800--Sobic010G068900 Sobic009G154900 Sobic009G154900 Sobic006G262800--Sobic009G154900 Sobic006G262800--Sobic001G478900 Sobic006G262800--Sobic004G256900 Sobic006G262800--Sobic002G172500 Sobic006G262800--Sobic008G163400 Sobic001G052100 Sobic001G052100 Sobic006G262800--Sobic001G052100 Sobic001G268300 Sobic001G268300 Sobic006G262800--Sobic001G268300 Sobic006G262800--Sobic004G241000
Octagon: transcription factors


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