Gene annotation
Transcriptome id Sobic.004G346200.2,Sobic.004G346200.1
Synonym SLO1, Sb04g037320
Functional annotation tetratricopeptide-like helical, putative, expressed
UniProt H0I4D6 , A0A1Z5RQA4 , C5XVX4
Pfam PF13041
Panther DB PTHR24015 PTHR24015:SF476
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G22410 : SLOW GROWTH 1
RAP-DB (Rice) LOC_Os02g57340.1 : tetratricopeptide-like helical, putative, expressed
MaizeGDB (Corn) Zm00025a022614
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G116400 pentatricopeptide, putative, expressed -
2 Sobic.006G085900 pentatricopeptide, putative, expressed -
3 Sobic.009G155400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
4 Sobic.007G087900 Rf1, mitochondrial precursor, putative, expressed -
5 Sobic.008G082800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
6 Sobic.010G190900 pentatricopeptide, putative, expressed -
7 Sobic.005G210700 pentatricopeptide repeat domain containing protein, putative, expressed -
8 Sobic.006G033380 - -
9 Sobic.006G262700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phytosulfokine receptor precursor, putative, expressed -
10 Sobic.002G389200 pentatricopeptide repeat domain containing protein, putative, expressed -
11 Sobic.001G478900 pentatricopeptide, putative, expressed -
12 Sobic.009G253101 - -
13 Sobic.010G068900 glutamate receptor 2.6 precursor, putative, expressed K05387: glutamate receptor, ionotropic, plant
14 Sobic.006G099501 - -
15 Sobic.004G217900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide domain containing protein, putative, expressed -
16 Sobic.008G163400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
17 Sobic.010G123700 expressed protein -
18 Sobic.005G000650 - -
19 Sobic.004G241000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
20 Sobic.003G156766 - -


Gene co-expression network
sample Sobic004G346200 Sobic004G346200 Sobic009G116400 Sobic009G116400 Sobic004G346200--Sobic009G116400 Sobic006G085900 Sobic006G085900 Sobic004G346200--Sobic006G085900 Sobic009G155400 Sobic009G155400 Sobic004G346200--Sobic009G155400 Sobic007G087900 Sobic007G087900 Sobic004G346200--Sobic007G087900 Sobic008G082800 Sobic008G082800 Sobic004G346200--Sobic008G082800 Sobic010G190900 Sobic010G190900 Sobic004G346200--Sobic010G190900 Sobic005G210700 Sobic005G210700 Sobic004G346200--Sobic005G210700 Sobic006G033380 Sobic006G033380 Sobic004G346200--Sobic006G033380 Sobic006G262700 Sobic006G262700 Sobic004G346200--Sobic006G262700 Sobic009G116400--Sobic009G155400 Sobic009G116400--Sobic006G262700 Sobic008G163400 Sobic008G163400 Sobic009G116400--Sobic008G163400 Sobic009G116400--Sobic010G190900 Sobic009G116400--Sobic007G087900 Sobic006G069100 Sobic006G069100 Sobic009G116400--Sobic006G069100 Sobic009G116400--Sobic005G210700 Sobic009G116400--Sobic004G346200 Sobic004G241000 Sobic004G241000 Sobic009G116400--Sobic004G241000 Sobic006G085900--Sobic004G241000 Sobic010G068900 Sobic010G068900 Sobic006G085900--Sobic010G068900 Sobic006G085900--Sobic009G155400 Sobic006G085900--Sobic006G069100 Sobic002G172500 Sobic002G172500 Sobic006G085900--Sobic002G172500 Sobic008G099900 Sobic008G099900 Sobic006G085900--Sobic008G099900 Sobic002G084400 Sobic002G084400 Sobic006G085900--Sobic002G084400 Sobic001G436600 Sobic001G436600 Sobic006G085900--Sobic001G436600 Sobic006G085900--Sobic005G210700 Sobic009G155400--Sobic009G116400 Sobic009G155400--Sobic008G163400 Sobic009G155400--Sobic004G241000 Sobic009G155400--Sobic006G085900 Sobic004G217900 Sobic004G217900 Sobic009G155400--Sobic004G217900 Sobic009G155400--Sobic006G069100 Sobic009G155400--Sobic002G172500 Sobic009G155400--Sobic006G262700 Sobic009G155400--Sobic005G210700 Sobic007G087900--Sobic009G116400 Sobic007G087900--Sobic006G069100 Sobic007G087900--Sobic010G190900 Sobic007G087900--Sobic010G068900 Sobic007G087900--Sobic006G262700 Sobic007G087900--Sobic006G085900 Sobic007G087900--Sobic004G241000 Sobic006G262800 Sobic006G262800 Sobic007G087900--Sobic006G262800 Sobic004G256900 Sobic004G256900 Sobic007G087900--Sobic004G256900 Sobic008G082800--Sobic002G172500 Sobic008G082800--Sobic004G256900 Sobic001G478900 Sobic001G478900 Sobic008G082800--Sobic001G478900 Sobic003G184300 Sobic003G184300 Sobic008G082800--Sobic003G184300 Sobic008G082800--Sobic010G068900 Sobic008G082800--Sobic009G155400 Sobic008G082800--Sobic006G085900 Sobic009G063500 Sobic009G063500 Sobic008G082800--Sobic009G063500 Sobic008G082800--Sobic006G262800 Sobic010G190900--Sobic010G068900 Sobic010G190900--Sobic004G241000 Sobic010G190900--Sobic006G069100 Sobic010G190900--Sobic004G256900 Sobic009G253101 Sobic009G253101 Sobic010G190900--Sobic009G253101 Sobic010G190900--Sobic009G116400 Sobic010G190900--Sobic009G155400 Sobic010G190900--Sobic007G087900 Sobic010G190900--Sobic002G172500 Sobic005G210700--Sobic008G099900 Sobic005G210700--Sobic009G155400 Sobic005G210700--Sobic009G116400 Sobic005G210700--Sobic006G085900 Sobic007G179600 Sobic007G179600 Sobic005G210700--Sobic007G179600 Sobic001G347100 Sobic001G347100 Sobic005G210700--Sobic001G347100 Sobic008G066900 Sobic008G066900 Sobic005G210700--Sobic008G066900 Sobic005G210700--Sobic006G069100 Sobic005G011000 Sobic005G011000 Sobic005G210700--Sobic005G011000 Sobic004G166301 Sobic004G166301 Sobic006G033380--Sobic004G166301 Sobic006G235650 Sobic006G235650 Sobic006G033380--Sobic006G235650 Sobic010G100432 Sobic010G100432 Sobic006G033380--Sobic010G100432 Sobic006G033380--Sobic004G346200 Sobic006G033380--Sobic007G087900 Sobic007G104300 Sobic007G104300 Sobic006G033380--Sobic007G104300 Sobic004G291600 Sobic004G291600 Sobic006G033380--Sobic004G291600 Sobic006G033380--Sobic009G116400 Sobic005G148400 Sobic005G148400 Sobic006G033380--Sobic005G148400 Sobic006G262700--Sobic009G116400 Sobic001G242300 Sobic001G242300 Sobic006G262700--Sobic001G242300 Sobic006G262700--Sobic009G155400 Sobic006G262700--Sobic008G163400 Sobic006G262700--Sobic004G256900 Sobic006G262700--Sobic010G068900 Sobic006G262700--Sobic010G190900 Sobic006G262700--Sobic004G241000 Sobic006G262700--Sobic007G087900
Octagon: transcription factors


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