Gene annotation
Transcriptome id Sobic.009G193850.1
Synonym -
Functional annotation -
UniProt A0A1Z5R3D9
Pfam PF03737
Panther DB PTHR13555 PTHR13555:SF34
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G02148 : -
RAP-DB (Rice) LOC_Os02g52430.1 : regulator of ribonuclease, putative, expressed
MaizeGDB (Corn) Zm00025a018573
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G041200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09567: PPIH, peptidyl-prolyl isomerase H (cyclophilin H)
2 Sobic.004G011000 expressed protein K11883: RNA-binding protein NOB1
3 Sobic.006G216000 DAG protein, chloroplast precursor, putative, expressed -
4 Sobic.007G162800 expressed protein -
5 Sobic.002G148300 - -
6 Sobic.001G404200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17790: mitochondrial import inner membrane translocase subunit TIM22
7 Sobic.003G118400 expressed protein -
8 Sobic.008G080000 leucine-rich repeat family protein, putative, expressed -
9 Sobic.006G242300 - -
10 Sobic.006G257001 - -
11 Sobic.001G396800 peptide chain release factor protein, putative, expressed K02836: peptide chain release factor 2
12 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
13 Sobic.008G083400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@argininosuccinate synthase, chloroplast precursor, putative, expressed K01940: argG, argininosuccinate synthase
14 Sobic.001G230200 inosine triphosphate pyrophosphatase, putative, expressed K01519: inosine triphosphate pyrophosphatase
15 Sobic.006G126200 alveolar soft part sarcoma chromosome region, candidate 1, putative, expressed K15627: ASPSCR1, tether containing UBX domain for GLUT4
16 Sobic.010G012600 expressed protein -
17 Sobic.002G253100 30S ribosomal protein S16, putative, expressed K02959: RP-S16, MRPS16, small subunit ribosomal protein S16
18 Sobic.002G254500 oxidoreductase, putative, expressed K18160: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2
19 Sobic.001G204100 ribosomal protein S18 containing protein, expressed -
20 Sobic.009G151800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2


Gene co-expression network
sample Sobic009G193850 Sobic009G193850 Sobic001G041200 Sobic001G041200 Sobic009G193850--Sobic001G041200 Sobic004G011000 Sobic004G011000 Sobic009G193850--Sobic004G011000 Sobic006G216000 Sobic006G216000 Sobic009G193850--Sobic006G216000 Sobic007G162800 Sobic007G162800 Sobic009G193850--Sobic007G162800 Sobic002G148300 Sobic002G148300 Sobic009G193850--Sobic002G148300 Sobic001G404200 Sobic001G404200 Sobic009G193850--Sobic001G404200 Sobic003G118400 Sobic003G118400 Sobic009G193850--Sobic003G118400 Sobic008G080000 Sobic008G080000 Sobic009G193850--Sobic008G080000 Sobic006G242300 Sobic006G242300 Sobic009G193850--Sobic006G242300 Sobic001G041200--Sobic006G242300 Sobic003G119400 Sobic003G119400 Sobic001G041200--Sobic003G119400 Sobic006G257001 Sobic006G257001 Sobic001G041200--Sobic006G257001 Sobic006G034800 Sobic006G034800 Sobic001G041200--Sobic006G034800 Sobic001G067900 Sobic001G067900 Sobic001G041200--Sobic001G067900 Sobic002G259400 Sobic002G259400 Sobic001G041200--Sobic002G259400 Sobic001G105100 Sobic001G105100 Sobic001G041200--Sobic001G105100 Sobic006G056600 Sobic006G056600 Sobic001G041200--Sobic006G056600 Sobic009G033900 Sobic009G033900 Sobic001G041200--Sobic009G033900 Sobic008G009600 Sobic008G009600 Sobic004G011000--Sobic008G009600 Sobic009G040500 Sobic009G040500 Sobic004G011000--Sobic009G040500 Sobic003G115100 Sobic003G115100 Sobic004G011000--Sobic003G115100 Sobic009G046700 Sobic009G046700 Sobic004G011000--Sobic009G046700 Sobic010G251100 Sobic010G251100 Sobic004G011000--Sobic010G251100 Sobic001G010600 Sobic001G010600 Sobic004G011000--Sobic001G010600 Sobic001G370300 Sobic001G370300 Sobic004G011000--Sobic001G370300 Sobic010G247400 Sobic010G247400 Sobic004G011000--Sobic010G247400 Sobic004G011000--Sobic009G193850 Sobic004G291400 Sobic004G291400 Sobic006G216000--Sobic004G291400 Sobic002G253100 Sobic002G253100 Sobic006G216000--Sobic002G253100 Sobic006G216000--Sobic003G119400 Sobic006G252100 Sobic006G252100 Sobic006G216000--Sobic006G252100 Sobic002G083400 Sobic002G083400 Sobic006G216000--Sobic002G083400 Sobic001G152000 Sobic001G152000 Sobic006G216000--Sobic001G152000 Sobic001G296400 Sobic001G296400 Sobic006G216000--Sobic001G296400 Sobic001G471600 Sobic001G471600 Sobic006G216000--Sobic001G471600 Sobic001G335201 Sobic001G335201 Sobic006G216000--Sobic001G335201 Sobic001G096000 Sobic001G096000 Sobic007G162800--Sobic001G096000 Sobic009G226400 Sobic009G226400 Sobic007G162800--Sobic009G226400 Sobic007G184500 Sobic007G184500 Sobic007G162800--Sobic007G184500 Sobic003G006400 Sobic003G006400 Sobic007G162800--Sobic003G006400 Sobic003G214300 Sobic003G214300 Sobic007G162800--Sobic003G214300 Sobic002G418700 Sobic002G418700 Sobic007G162800--Sobic002G418700 Sobic001G143500 Sobic001G143500 Sobic007G162800--Sobic001G143500 Sobic009G131900 Sobic009G131900 Sobic007G162800--Sobic009G131900 Sobic008G004400 Sobic008G004400 Sobic007G162800--Sobic008G004400 Sobic001G503400 Sobic001G503400 Sobic002G148300--Sobic001G503400 Sobic002G272600 Sobic002G272600 Sobic002G148300--Sobic002G272600 Sobic002G143900 Sobic002G143900 Sobic002G148300--Sobic002G143900 Sobic001G119700 Sobic001G119700 Sobic002G148300--Sobic001G119700 Sobic002G148300--Sobic007G162800 Sobic010G219100 Sobic010G219100 Sobic002G148300--Sobic010G219100 Sobic002G148300--Sobic009G193850 Sobic005G010500 Sobic005G010500 Sobic002G148300--Sobic005G010500 Sobic002G180000 Sobic002G180000 Sobic002G148300--Sobic002G180000 Sobic006G094600 Sobic006G094600 Sobic001G404200--Sobic006G094600 Sobic001G332300 Sobic001G332300 Sobic001G404200--Sobic001G332300 Sobic007G118000 Sobic007G118000 Sobic001G404200--Sobic007G118000 Sobic003G374000 Sobic003G374000 Sobic001G404200--Sobic003G374000 Sobic005G184200 Sobic005G184200 Sobic001G404200--Sobic005G184200 Sobic008G110500 Sobic008G110500 Sobic001G404200--Sobic008G110500 Sobic007G014900 Sobic007G014900 Sobic001G404200--Sobic007G014900 Sobic003G148900 Sobic003G148900 Sobic001G404200--Sobic003G148900 Sobic008G145100 Sobic008G145100 Sobic001G404200--Sobic008G145100 Sobic002G254500 Sobic002G254500 Sobic003G118400--Sobic002G254500 Sobic001G382200 Sobic001G382200 Sobic003G118400--Sobic001G382200 Sobic001G530800 Sobic001G530800 Sobic003G118400--Sobic001G530800 Sobic004G249300 Sobic004G249300 Sobic003G118400--Sobic004G249300 Sobic002G116500 Sobic002G116500 Sobic003G118400--Sobic002G116500 Sobic003G125100 Sobic003G125100 Sobic003G118400--Sobic003G125100 Sobic009G169200 Sobic009G169200 Sobic003G118400--Sobic009G169200 Sobic003G118400--Sobic006G094600 Sobic003G222700 Sobic003G222700 Sobic003G118400--Sobic003G222700 Sobic008G080000--Sobic009G193850 Sobic001G486000 Sobic001G486000 Sobic008G080000--Sobic001G486000 Sobic003G408300 Sobic003G408300 Sobic008G080000--Sobic003G408300 Sobic002G177500 Sobic002G177500 Sobic008G080000--Sobic002G177500 Sobic009G065200 Sobic009G065200 Sobic008G080000--Sobic009G065200 Sobic008G111700 Sobic008G111700 Sobic008G080000--Sobic008G111700 Sobic008G080000--Sobic002G148300 Sobic002G088700 Sobic002G088700 Sobic008G080000--Sobic002G088700 Sobic004G057800 Sobic004G057800 Sobic008G080000--Sobic004G057800 Sobic006G242300--Sobic001G041200 Sobic003G045400 Sobic003G045400 Sobic006G242300--Sobic003G045400 Sobic006G242300--Sobic006G056600 Sobic009G133400 Sobic009G133400 Sobic006G242300--Sobic009G133400 Sobic006G242300--Sobic003G119400 Sobic006G242300--Sobic001G067900 Sobic006G242300--Sobic009G033900 Sobic004G072800 Sobic004G072800 Sobic006G242300--Sobic004G072800 Sobic003G043100 Sobic003G043100 Sobic006G242300--Sobic003G043100
Octagon: transcription factors


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