Gene annotation
Transcriptome id Sobic.010G012600.1
Synonym Sb10g001250
Functional annotation expressed protein
UniProt C5Z2T9
Pfam -
Panther DB PTHR35464 PTHR35464:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G75140 : -
RAP-DB (Rice) LOC_Os06g02480.1 : expressed protein
MaizeGDB (Corn) Zm00025a041236
Brachypodium KQK19797
Barley HORVU7Hr1G008090.2 , HORVU7Hr1G008090.1
Wheat -
Populus -


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cDNA sequences
Sobic.010G012600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G251100 - K03257: translation initiation factor 4A
2 Sobic.003G024800 CGMC_GSK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
3 Sobic.001G512600 protein phosphatase 2C, putative, expressed -
4 Sobic.006G242300 - -
5 Sobic.004G057800 URED, putative, expressed K03190: ureD, urease accessory protein
6 Sobic.008G142700 expressed protein -
7 Sobic.001G080000 expressed protein -
8 Sobic.007G205000 zinc finger family protein, putative, expressed -
9 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
10 Sobic.003G350600 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
11 Sobic.001G226100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
12 Sobic.006G047100 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
13 Sobic.001G402300 RNA recognition motif containing protein, putative, expressed K11094: U2 small nuclear ribonucleoprotein B''
14 Sobic.009G133400 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
15 Sobic.003G045400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
16 Sobic.003G043100 ribosome biogenesis regulatory protein, putative, expressed K14852: regulator of ribosome biosynthesis
17 Sobic.001G467000 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
18 Sobic.008G173000 transketolase, putative, expressed K00162: PDHB, pyruvate dehydrogenase E1 component beta subunit
19 Sobic.004G301900 potyvirus VPg interacting protein, putative, expressed -
20 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit


Gene co-expression network
sample Sobic010G012600 Sobic010G012600 Sobic010G251100 Sobic010G251100 Sobic010G012600--Sobic010G251100 Sobic003G024800 Sobic003G024800 Sobic010G012600--Sobic003G024800 Sobic001G512600 Sobic001G512600 Sobic010G012600--Sobic001G512600 Sobic006G242300 Sobic006G242300 Sobic010G012600--Sobic006G242300 Sobic004G057800 Sobic004G057800 Sobic010G012600--Sobic004G057800 Sobic008G142700 Sobic008G142700 Sobic010G012600--Sobic008G142700 Sobic001G080000 Sobic001G080000 Sobic010G012600--Sobic001G080000 Sobic007G205000 Sobic007G205000 Sobic010G012600--Sobic007G205000 Sobic001G309100 Sobic001G309100 Sobic010G012600--Sobic001G309100 Sobic001G226100 Sobic001G226100 Sobic010G251100--Sobic001G226100 Sobic001G402300 Sobic001G402300 Sobic010G251100--Sobic001G402300 Sobic003G226500 Sobic003G226500 Sobic010G251100--Sobic003G226500 Sobic009G232400 Sobic009G232400 Sobic010G251100--Sobic009G232400 Sobic010G251100--Sobic007G205000 Sobic008G004400 Sobic008G004400 Sobic010G251100--Sobic008G004400 Sobic006G278700 Sobic006G278700 Sobic010G251100--Sobic006G278700 Sobic010G251100--Sobic010G012600 Sobic010G193800 Sobic010G193800 Sobic010G251100--Sobic010G193800 Sobic009G036900 Sobic009G036900 Sobic003G024800--Sobic009G036900 Sobic004G349100 Sobic004G349100 Sobic003G024800--Sobic004G349100 Sobic003G024800--Sobic001G309100 Sobic009G034400 Sobic009G034400 Sobic003G024800--Sobic009G034400 Sobic001G350501 Sobic001G350501 Sobic003G024800--Sobic001G350501 Sobic007G063200 Sobic007G063200 Sobic003G024800--Sobic007G063200 Sobic010G071200 Sobic010G071200 Sobic003G024800--Sobic010G071200 Sobic003G024800--Sobic008G142700 Sobic010G228600 Sobic010G228600 Sobic003G024800--Sobic010G228600 Sobic003G350600 Sobic003G350600 Sobic001G512600--Sobic003G350600 Sobic001G467000 Sobic001G467000 Sobic001G512600--Sobic001G467000 Sobic001G512600--Sobic008G142700 Sobic003G250500 Sobic003G250500 Sobic001G512600--Sobic003G250500 Sobic004G150400 Sobic004G150400 Sobic001G512600--Sobic004G150400 Sobic001G512600--Sobic003G226500 Sobic004G301900 Sobic004G301900 Sobic001G512600--Sobic004G301900 Sobic003G000800 Sobic003G000800 Sobic001G512600--Sobic003G000800 Sobic001G372000 Sobic001G372000 Sobic001G512600--Sobic001G372000 Sobic001G041200 Sobic001G041200 Sobic006G242300--Sobic001G041200 Sobic003G045400 Sobic003G045400 Sobic006G242300--Sobic003G045400 Sobic006G056600 Sobic006G056600 Sobic006G242300--Sobic006G056600 Sobic009G133400 Sobic009G133400 Sobic006G242300--Sobic009G133400 Sobic003G119400 Sobic003G119400 Sobic006G242300--Sobic003G119400 Sobic001G067900 Sobic001G067900 Sobic006G242300--Sobic001G067900 Sobic009G033900 Sobic009G033900 Sobic006G242300--Sobic009G033900 Sobic004G072800 Sobic004G072800 Sobic006G242300--Sobic004G072800 Sobic003G043100 Sobic003G043100 Sobic006G242300--Sobic003G043100 Sobic001G390500 Sobic001G390500 Sobic004G057800--Sobic001G390500 Sobic004G057800--Sobic009G033900 Sobic001G136900 Sobic001G136900 Sobic004G057800--Sobic001G136900 Sobic004G057800--Sobic001G309100 Sobic001G038100 Sobic001G038100 Sobic004G057800--Sobic001G038100 Sobic003G311000 Sobic003G311000 Sobic004G057800--Sobic003G311000 Sobic004G057800--Sobic007G205000 Sobic001G370300 Sobic001G370300 Sobic004G057800--Sobic001G370300 Sobic006G183000 Sobic006G183000 Sobic004G057800--Sobic006G183000 Sobic008G142700--Sobic010G071200 Sobic001G512900 Sobic001G512900 Sobic008G142700--Sobic001G512900 Sobic010G055500 Sobic010G055500 Sobic008G142700--Sobic010G055500 Sobic001G149700 Sobic001G149700 Sobic008G142700--Sobic001G149700 Sobic008G142700--Sobic007G063200 Sobic008G142700--Sobic003G350600 Sobic006G109300 Sobic006G109300 Sobic008G142700--Sobic006G109300 Sobic009G246950 Sobic009G246950 Sobic008G142700--Sobic009G246950 Sobic001G478300 Sobic001G478300 Sobic008G142700--Sobic001G478300 Sobic003G405700 Sobic003G405700 Sobic001G080000--Sobic003G405700 Sobic008G139700 Sobic008G139700 Sobic001G080000--Sobic008G139700 Sobic002G272600 Sobic002G272600 Sobic001G080000--Sobic002G272600 Sobic002G180000 Sobic002G180000 Sobic001G080000--Sobic002G180000 Sobic010G105600 Sobic010G105600 Sobic001G080000--Sobic010G105600 Sobic001G143500 Sobic001G143500 Sobic001G080000--Sobic001G143500 Sobic001G010600 Sobic001G010600 Sobic001G080000--Sobic001G010600 Sobic001G080000--Sobic003G045400 Sobic001G080000--Sobic007G205000 Sobic001G028400 Sobic001G028400 Sobic007G205000--Sobic001G028400 Sobic007G205000--Sobic006G278700 Sobic007G118200 Sobic007G118200 Sobic007G205000--Sobic007G118200 Sobic009G198100 Sobic009G198100 Sobic007G205000--Sobic009G198100 Sobic010G033400 Sobic010G033400 Sobic007G205000--Sobic010G033400 Sobic004G013600 Sobic004G013600 Sobic007G205000--Sobic004G013600 Sobic006G267300 Sobic006G267300 Sobic007G205000--Sobic006G267300 Sobic007G205000--Sobic001G010600 Sobic004G350100 Sobic004G350100 Sobic007G205000--Sobic004G350100 Sobic001G309100--Sobic001G038100 Sobic001G309100--Sobic003G024800 Sobic003G101300 Sobic003G101300 Sobic001G309100--Sobic003G101300 Sobic003G189900 Sobic003G189900 Sobic001G309100--Sobic003G189900 Sobic001G309100--Sobic001G390500 Sobic001G309100--Sobic010G071200 Sobic003G437500 Sobic003G437500 Sobic001G309100--Sobic003G437500 Sobic001G309100--Sobic001G350501 Sobic007G117100 Sobic007G117100 Sobic001G309100--Sobic007G117100
Octagon: transcription factors


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