Gene annotation
Transcriptome id Sobic.006G216000.1
Synonym Sb06g028620
Functional annotation DAG protein, chloroplast precursor, putative, expressed
UniProt C5YG24
Pfam -
Panther DB PTHR31346 PTHR31346:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G06790 : plastid developmental protein DAG, putative
RAP-DB (Rice) LOC_Os03g38490.1 : DAG protein, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a057038
Brachypodium PNT76008 , KQJ84402 , KQK18487 , KQK06900 , PNT76616 , PNT76617 , KQK19818 , KQK19819 , PNT76615 , KQK19788 , KQK19789 , KQJ92747 , KQK18495 , KQK18494 , KQK18492
Barley HORVU6Hr1G002030.3 , HORVU6Hr1G002030.1 , HORVU6Hr1G002030.6 , HORVU6Hr1G002030.5 , HORVU6Hr1G002030.4 , HORVU7Hr1G054850.2 , HORVU7Hr1G054850.1 , HORVU6Hr1G077460.4 , HORVU6Hr1G077460.5 , HORVU6Hr1G077460.1 , HORVU6Hr1G077460.2 , HORVU6Hr1G077460.3 , HORVU2Hr1G101720.1 , HORVU2Hr1G101720.2 , HORVU7Hr1G008880.3 , HORVU5Hr1G072150.8 , HORVU5Hr1G072150.9 , HORVU5Hr1G072150.1 , HORVU5Hr1G072150.2 , HORVU5Hr1G072150.3 , HORVU5Hr1G072150.5 , HORVU5Hr1G072150.6 , HORVU5Hr1G072150.7 , HORVU5Hr1G072150.10 , HORVU7Hr1G008880.2
Wheat TraesCS7D02G263300 , TraesCS4A02G437100 , TraesCS6B02G344700 , TraesCS6B02G344700 , TraesCS2D02G434600 , TraesCS2A02G437600 , TraesCS6A02G314700 , TraesCS2B02G457700 , TraesCS7B02G160200 , TraesCS7D02G045100 , TraesCS7A02G050200 , TraesCS6D02G294000 , TraesCS7A02G262500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G291400 rho guanine nucleotide exchange factor, putative, expressed -
2 Sobic.002G253100 30S ribosomal protein S16, putative, expressed K02959: RP-S16, MRPS16, small subunit ribosomal protein S16
3 Sobic.003G119400 PUR ALPHA-1, putative, expressed -
4 Sobic.006G252100 mediator of RNA polymerase II transcription subunit 7, putative, expressed K15148: mediator of RNA polymerase II transcription subunit 7
5 Sobic.002G083400 PHD finger protein, putative, expressed -
6 Sobic.001G152000 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
7 Sobic.001G296400 palmitoyl-protein thioesterase 1 precursor, putative, expressed K01074: palmitoyl-protein thioesterase
8 Sobic.001G471600 acetyltransferase, GNAT family, putative, expressed -
9 Sobic.001G335201 - -
10 Sobic.006G281500 prenylcysteine oxidase 1 precursor, putative, expressed K05906: PCYOX1, prenylcysteine oxidase / farnesylcysteine lyase
11 Sobic.009G033900 snurportin-1, putative, expressed K13151: SNUPN, snurportin-1
12 Sobic.010G108900 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
13 Sobic.007G119900 signal recognition particle receptor subunit beta, putative, expressed K12272: SRPRB, signal recognition particle receptor subunit beta
14 Sobic.001G096300 deoxyhypusine synthase, putative, expressed K00809: DHPS, deoxyhypusine synthase
15 Sobic.004G074300 phytoene dehydrogenase-like, putative, expressed K16750: biogenesis of lysosome-related organelles complex 1 subunit 2
16 Sobic.001G041200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09567: PPIH, peptidyl-prolyl isomerase H (cyclophilin H)
17 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
18 Sobic.009G193850 - -
19 Sobic.001G542800 formyl transferase, putative, expressed K01433: formyltetrahydrofolate deformylase
20 Sobic.006G242300 - -


Gene co-expression network
sample Sobic006G216000 Sobic006G216000 Sobic004G291400 Sobic004G291400 Sobic006G216000--Sobic004G291400 Sobic002G253100 Sobic002G253100 Sobic006G216000--Sobic002G253100 Sobic003G119400 Sobic003G119400 Sobic006G216000--Sobic003G119400 Sobic006G252100 Sobic006G252100 Sobic006G216000--Sobic006G252100 Sobic002G083400 Sobic002G083400 Sobic006G216000--Sobic002G083400 Sobic001G152000 Sobic001G152000 Sobic006G216000--Sobic001G152000 Sobic001G296400 Sobic001G296400 Sobic006G216000--Sobic001G296400 Sobic001G471600 Sobic001G471600 Sobic006G216000--Sobic001G471600 Sobic001G335201 Sobic001G335201 Sobic006G216000--Sobic001G335201 Sobic005G105500 Sobic005G105500 Sobic004G291400--Sobic005G105500 Sobic004G291400--Sobic006G216000 Sobic006G002201 Sobic006G002201 Sobic004G291400--Sobic006G002201 Sobic006G020900 Sobic006G020900 Sobic004G291400--Sobic006G020900 Sobic003G196800 Sobic003G196800 Sobic004G291400--Sobic003G196800 Sobic004G124100 Sobic004G124100 Sobic004G291400--Sobic004G124100 Sobic002G341800 Sobic002G341800 Sobic004G291400--Sobic002G341800 Sobic005G111900 Sobic005G111900 Sobic004G291400--Sobic005G111900 Sobic009G234400 Sobic009G234400 Sobic004G291400--Sobic009G234400 Sobic002G253100--Sobic006G216000 Sobic007G119900 Sobic007G119900 Sobic002G253100--Sobic007G119900 Sobic005G132700 Sobic005G132700 Sobic002G253100--Sobic005G132700 Sobic002G253100--Sobic001G152000 Sobic002G402500 Sobic002G402500 Sobic002G253100--Sobic002G402500 Sobic002G253100--Sobic006G020900 Sobic002G253100--Sobic003G119400 Sobic001G404200 Sobic001G404200 Sobic002G253100--Sobic001G404200 Sobic004G248900 Sobic004G248900 Sobic002G253100--Sobic004G248900 Sobic004G074300 Sobic004G074300 Sobic003G119400--Sobic004G074300 Sobic001G041200 Sobic001G041200 Sobic003G119400--Sobic001G041200 Sobic002G259400 Sobic002G259400 Sobic003G119400--Sobic002G259400 Sobic010G146600 Sobic010G146600 Sobic003G119400--Sobic010G146600 Sobic003G119400--Sobic006G216000 Sobic006G272200 Sobic006G272200 Sobic003G119400--Sobic006G272200 Sobic006G242300 Sobic006G242300 Sobic003G119400--Sobic006G242300 Sobic002G268400 Sobic002G268400 Sobic003G119400--Sobic002G268400 Sobic002G306400 Sobic002G306400 Sobic003G119400--Sobic002G306400 Sobic006G252100--Sobic002G268400 Sobic006G252100--Sobic001G152000 Sobic009G033900 Sobic009G033900 Sobic006G252100--Sobic009G033900 Sobic006G252100--Sobic006G216000 Sobic003G220700 Sobic003G220700 Sobic006G252100--Sobic003G220700 Sobic006G094600 Sobic006G094600 Sobic006G252100--Sobic006G094600 Sobic001G226100 Sobic001G226100 Sobic006G252100--Sobic001G226100 Sobic006G252100--Sobic004G074300 Sobic001G370300 Sobic001G370300 Sobic006G252100--Sobic001G370300 Sobic002G083400--Sobic006G216000 Sobic002G083400--Sobic006G272200 Sobic002G083400--Sobic001G041200 Sobic002G192500 Sobic002G192500 Sobic002G083400--Sobic002G192500 Sobic009G056300 Sobic009G056300 Sobic002G083400--Sobic009G056300 Sobic002G083400--Sobic003G119400 Sobic002G083400--Sobic006G252100 Sobic008G051100 Sobic008G051100 Sobic002G083400--Sobic008G051100 Sobic006G281500 Sobic006G281500 Sobic002G083400--Sobic006G281500 Sobic001G152000--Sobic002G268400 Sobic001G152000--Sobic004G074300 Sobic001G152000--Sobic009G033900 Sobic001G294900 Sobic001G294900 Sobic001G152000--Sobic001G294900 Sobic004G019600 Sobic004G019600 Sobic001G152000--Sobic004G019600 Sobic001G152000--Sobic006G252100 Sobic001G009800 Sobic001G009800 Sobic001G152000--Sobic001G009800 Sobic003G405700 Sobic003G405700 Sobic001G152000--Sobic003G405700 Sobic006G183000 Sobic006G183000 Sobic001G152000--Sobic006G183000 Sobic003G071600 Sobic003G071600 Sobic001G296400--Sobic003G071600 Sobic004G175600 Sobic004G175600 Sobic001G296400--Sobic004G175600 Sobic004G208600 Sobic004G208600 Sobic001G296400--Sobic004G208600 Sobic001G296400--Sobic006G216000 Sobic001G063800 Sobic001G063800 Sobic001G296400--Sobic001G063800 Sobic003G420900 Sobic003G420900 Sobic001G296400--Sobic003G420900 Sobic007G171950 Sobic007G171950 Sobic001G296400--Sobic007G171950 Sobic008G173000 Sobic008G173000 Sobic001G296400--Sobic008G173000 Sobic001G384800 Sobic001G384800 Sobic001G296400--Sobic001G384800 Sobic001G471600--Sobic006G216000 Sobic007G172600 Sobic007G172600 Sobic001G471600--Sobic007G172600 Sobic001G471600--Sobic002G253100 Sobic001G471600--Sobic007G119900 Sobic004G133700 Sobic004G133700 Sobic001G471600--Sobic004G133700 Sobic008G125100 Sobic008G125100 Sobic001G471600--Sobic008G125100 Sobic001G471600--Sobic001G152000 Sobic010G055800 Sobic010G055800 Sobic001G471600--Sobic010G055800 Sobic001G471600--Sobic009G056300 Sobic007G088900 Sobic007G088900 Sobic001G335201--Sobic007G088900 Sobic003G311000 Sobic003G311000 Sobic001G335201--Sobic003G311000 Sobic007G139400 Sobic007G139400 Sobic001G335201--Sobic007G139400 Sobic001G335201--Sobic006G216000 Sobic001G309100 Sobic001G309100 Sobic001G335201--Sobic001G309100 Sobic001G472100 Sobic001G472100 Sobic001G335201--Sobic001G472100 Sobic001G537800 Sobic001G537800 Sobic001G335201--Sobic001G537800 Sobic010G217200 Sobic010G217200 Sobic001G335201--Sobic010G217200 Sobic001G335201--Sobic009G056300
Octagon: transcription factors


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