Gene annotation
Transcriptome id Sobic.001G471600.1
Synonym Sb01g044190
Functional annotation acetyltransferase, GNAT family, putative, expressed
UniProt Q09EL3 , C5WUQ5
Pfam PF13302
Panther DB PTHR13256 PTHR13256:SF16
NCBI CDD KOG4135; Predicted phosphoglucosamine acetyltransferase
KEGG Orthology -
Gene Ontology GO:0008080; N-acetyltransferase activity


Orthologs (automatic annotation)
TAIR AT2G04845 : Acyl-CoA N-acyltransferases (NAT) superfamily protein
RAP-DB (Rice) LOC_Os03g09860.2 : acetyltransferase, GNAT family, putative, expressed
MaizeGDB (Corn) Zm00025a053186
Brachypodium KQK23158 , KQK23156 , KQK23157
Barley HORVU4Hr1G071380.5 , HORVU4Hr1G071380.6 , HORVU4Hr1G071380.1 , HORVU4Hr1G071380.2
Wheat TraesCS4A02G044300 , TraesCS4D02G265400
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G471600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G216000 DAG protein, chloroplast precursor, putative, expressed -
2 Sobic.007G172600 dihydroneopterin aldolase, putative, expressed K01633: 7,8-dihydroneopterin aldolase/epimerase/oxygenase
3 Sobic.002G253100 30S ribosomal protein S16, putative, expressed K02959: RP-S16, MRPS16, small subunit ribosomal protein S16
4 Sobic.007G119900 signal recognition particle receptor subunit beta, putative, expressed K12272: SRPRB, signal recognition particle receptor subunit beta
5 Sobic.004G133700 apoptosis inhibitor 5, putative, expressed -
6 Sobic.008G125100 Mur ligase family protein, putative, expressed -
7 Sobic.001G152000 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
8 Sobic.010G055800 CDK-activating kinase assembly factor MAT1 family protein, expressed K10842: CDK-activating kinase assembly factor MAT1
9 Sobic.009G056300 PHD finger protein, putative, expressed -
10 Sobic.005G025800 dual specificity protein phosphatase, putative, expressed K14819: DUSP12, dual specificity phosphatase 12
11 Sobic.001G527300 - K14777: DDX47, ATP-dependent RNA helicase DDX47/RRP3
12 Sobic.001G131700 expressed protein -
13 Sobic.001G463500 FAD-linked sulfhydryl oxidase ALR, putative, expressed K17783: ERV1, GFER, mitochondrial FAD-linked sulfhydryl oxidase
14 Sobic.010G278600 FG-GAP repeat-containing protein, putative, expressed -
15 Sobic.002G408600 expressed protein -
16 Sobic.004G175600 tetratricopeptide repeat domain containing protein, expressed -
17 Sobic.002G330500 hydrolase, NUDIX family, domain containing protein, expressed K01823: idi, isopentenyl-diphosphate Delta-isomerase
18 Sobic.009G139300 expressed protein -
19 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
20 Sobic.009G033900 snurportin-1, putative, expressed K13151: SNUPN, snurportin-1


Gene co-expression network
sample Sobic001G471600 Sobic001G471600 Sobic006G216000 Sobic006G216000 Sobic001G471600--Sobic006G216000 Sobic007G172600 Sobic007G172600 Sobic001G471600--Sobic007G172600 Sobic002G253100 Sobic002G253100 Sobic001G471600--Sobic002G253100 Sobic007G119900 Sobic007G119900 Sobic001G471600--Sobic007G119900 Sobic004G133700 Sobic004G133700 Sobic001G471600--Sobic004G133700 Sobic008G125100 Sobic008G125100 Sobic001G471600--Sobic008G125100 Sobic001G152000 Sobic001G152000 Sobic001G471600--Sobic001G152000 Sobic010G055800 Sobic010G055800 Sobic001G471600--Sobic010G055800 Sobic009G056300 Sobic009G056300 Sobic001G471600--Sobic009G056300 Sobic004G291400 Sobic004G291400 Sobic006G216000--Sobic004G291400 Sobic006G216000--Sobic002G253100 Sobic003G119400 Sobic003G119400 Sobic006G216000--Sobic003G119400 Sobic006G252100 Sobic006G252100 Sobic006G216000--Sobic006G252100 Sobic002G083400 Sobic002G083400 Sobic006G216000--Sobic002G083400 Sobic006G216000--Sobic001G152000 Sobic001G296400 Sobic001G296400 Sobic006G216000--Sobic001G296400 Sobic006G216000--Sobic001G471600 Sobic001G335201 Sobic001G335201 Sobic006G216000--Sobic001G335201 Sobic001G115500 Sobic001G115500 Sobic007G172600--Sobic001G115500 Sobic007G172600--Sobic008G125100 Sobic007G172600--Sobic001G471600 Sobic008G135701 Sobic008G135701 Sobic007G172600--Sobic008G135701 Sobic002G317600 Sobic002G317600 Sobic007G172600--Sobic002G317600 Sobic008G083400 Sobic008G083400 Sobic007G172600--Sobic008G083400 Sobic009G122900 Sobic009G122900 Sobic007G172600--Sobic009G122900 Sobic004G067400 Sobic004G067400 Sobic007G172600--Sobic004G067400 Sobic001G469200 Sobic001G469200 Sobic007G172600--Sobic001G469200 Sobic002G253100--Sobic006G216000 Sobic002G253100--Sobic007G119900 Sobic005G132700 Sobic005G132700 Sobic002G253100--Sobic005G132700 Sobic002G253100--Sobic001G152000 Sobic002G402500 Sobic002G402500 Sobic002G253100--Sobic002G402500 Sobic006G020900 Sobic006G020900 Sobic002G253100--Sobic006G020900 Sobic002G253100--Sobic003G119400 Sobic001G404200 Sobic001G404200 Sobic002G253100--Sobic001G404200 Sobic004G248900 Sobic004G248900 Sobic002G253100--Sobic004G248900 Sobic005G025800 Sobic005G025800 Sobic007G119900--Sobic005G025800 Sobic003G083900 Sobic003G083900 Sobic007G119900--Sobic003G083900 Sobic007G119900--Sobic004G133700 Sobic007G119900--Sobic001G152000 Sobic001G226000 Sobic001G226000 Sobic007G119900--Sobic001G226000 Sobic007G119900--Sobic002G253100 Sobic009G001100 Sobic009G001100 Sobic007G119900--Sobic009G001100 Sobic001G291800 Sobic001G291800 Sobic007G119900--Sobic001G291800 Sobic001G168900 Sobic001G168900 Sobic007G119900--Sobic001G168900 Sobic004G133700--Sobic001G291800 Sobic004G133700--Sobic003G083900 Sobic004G133700--Sobic001G226000 Sobic004G133700--Sobic005G025800 Sobic004G133700--Sobic007G119900 Sobic005G199200 Sobic005G199200 Sobic004G133700--Sobic005G199200 Sobic004G133700--Sobic001G168900 Sobic004G133700--Sobic001G152000 Sobic007G183300 Sobic007G183300 Sobic004G133700--Sobic007G183300 Sobic008G125100--Sobic009G122900 Sobic001G315400 Sobic001G315400 Sobic008G125100--Sobic001G315400 Sobic007G000400 Sobic007G000400 Sobic008G125100--Sobic007G000400 Sobic004G128200 Sobic004G128200 Sobic008G125100--Sobic004G128200 Sobic001G236800 Sobic001G236800 Sobic008G125100--Sobic001G236800 Sobic003G304800 Sobic003G304800 Sobic008G125100--Sobic003G304800 Sobic008G125100--Sobic007G172600 Sobic004G178400 Sobic004G178400 Sobic008G125100--Sobic004G178400 Sobic002G380100 Sobic002G380100 Sobic008G125100--Sobic002G380100 Sobic002G268400 Sobic002G268400 Sobic001G152000--Sobic002G268400 Sobic004G074300 Sobic004G074300 Sobic001G152000--Sobic004G074300 Sobic009G033900 Sobic009G033900 Sobic001G152000--Sobic009G033900 Sobic001G294900 Sobic001G294900 Sobic001G152000--Sobic001G294900 Sobic004G019600 Sobic004G019600 Sobic001G152000--Sobic004G019600 Sobic001G152000--Sobic006G252100 Sobic001G009800 Sobic001G009800 Sobic001G152000--Sobic001G009800 Sobic003G405700 Sobic003G405700 Sobic001G152000--Sobic003G405700 Sobic006G183000 Sobic006G183000 Sobic001G152000--Sobic006G183000 Sobic002G262700 Sobic002G262700 Sobic010G055800--Sobic002G262700 Sobic001G042200 Sobic001G042200 Sobic010G055800--Sobic001G042200 Sobic004G345400 Sobic004G345400 Sobic010G055800--Sobic004G345400 Sobic004G180900 Sobic004G180900 Sobic010G055800--Sobic004G180900 Sobic010G187600 Sobic010G187600 Sobic010G055800--Sobic010G187600 Sobic003G123000 Sobic003G123000 Sobic010G055800--Sobic003G123000 Sobic009G092400 Sobic009G092400 Sobic010G055800--Sobic009G092400 Sobic006G186400 Sobic006G186400 Sobic010G055800--Sobic006G186400 Sobic004G068500 Sobic004G068500 Sobic010G055800--Sobic004G068500 Sobic008G125000 Sobic008G125000 Sobic009G056300--Sobic008G125000 Sobic004G206300 Sobic004G206300 Sobic009G056300--Sobic004G206300 Sobic002G224700 Sobic002G224700 Sobic009G056300--Sobic002G224700 Sobic009G194300 Sobic009G194300 Sobic009G056300--Sobic009G194300 Sobic001G041200 Sobic001G041200 Sobic009G056300--Sobic001G041200 Sobic001G080000 Sobic001G080000 Sobic009G056300--Sobic001G080000 Sobic004G027000 Sobic004G027000 Sobic009G056300--Sobic004G027000 Sobic002G394800 Sobic002G394800 Sobic009G056300--Sobic002G394800 Sobic009G056300--Sobic001G152000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.