Gene annotation
Transcriptome id Sobic.001G131700.1,Sobic.001G131700.2
Synonym Sb01g011540
Functional annotation expressed protein
UniProt A0A1B6QIS4 , A0A1B6QIS2
Pfam -
Panther DB PTHR16263 PTHR16263:SF4
NCBI CDD KOG2610; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G27150 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os03g48380.1 : expressed protein
MaizeGDB (Corn) Zm00025a007660
Brachypodium KQK13729
Barley HORVU4Hr1G004800.21 , HORVU4Hr1G004800.20 , HORVU4Hr1G004800.23 , HORVU4Hr1G004800.22 , HORVU4Hr1G004800.6 , HORVU4Hr1G004800.7 , HORVU4Hr1G004800.4 , HORVU4Hr1G004800.5 , HORVU4Hr1G004800.2 , HORVU4Hr1G004800.3 , HORVU4Hr1G004800.1 , HORVU4Hr1G004800.8 , HORVU4Hr1G004800.9 , HORVU4Hr1G004800.18 , HORVU4Hr1G004800.19 , HORVU4Hr1G004800.14 , HORVU4Hr1G004800.15 , HORVU4Hr1G004800.16 , HORVU4Hr1G004800.17 , HORVU4Hr1G004800.10 , HORVU4Hr1G004800.11 , HORVU4Hr1G004800.12 , HORVU4Hr1G004800.13
Wheat TraesCS4B02G030500 , TraesCS4D02G028000 , TraesCS4A02G282800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G120300 tm-1GCR237 protein, putative, expressed -
2 Sobic.010G090500 expressed protein -
3 Sobic.002G264300 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
4 Sobic.001G533100 GHMP kinases ATP-binding protein, putative, expressed K05305: fucokinase
5 Sobic.002G125800 phosphoglucomutase, putative, expressed -
6 Sobic.007G172600 dihydroneopterin aldolase, putative, expressed K01633: 7,8-dihydroneopterin aldolase/epimerase/oxygenase
7 Sobic.001G471600 acetyltransferase, GNAT family, putative, expressed -
8 Sobic.001G073150 - K15449: tRNA wybutosine-synthesizing protein 1
9 Sobic.008G125000 AP-3 complex subunit delta, putative, expressed K12396: AP-3 complex subunit delta
10 Sobic.008G125100 Mur ligase family protein, putative, expressed -
11 Sobic.003G053700 growth regulator related protein, putative, expressed -
12 Sobic.001G159800 KIP1, putative, expressed -
13 Sobic.010G221200 neurochondrin family protein, putative, expressed -
14 Sobic.003G332200 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
15 Sobic.010G160400 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed K15227: arogenate dehydrogenase (NADP+), plant
16 Sobic.007G163600 expressed protein -
17 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
18 Sobic.003G286800 expressed protein -
19 Sobic.006G109500 aldehyde dehydrogenase, putative, expressed K00130: betB, betaine-aldehyde dehydrogenase
20 Sobic.009G151800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2


Gene co-expression network
sample Sobic001G131700 Sobic001G131700 Sobic010G120300 Sobic010G120300 Sobic001G131700--Sobic010G120300 Sobic010G090500 Sobic010G090500 Sobic001G131700--Sobic010G090500 Sobic002G264300 Sobic002G264300 Sobic001G131700--Sobic002G264300 Sobic001G533100 Sobic001G533100 Sobic001G131700--Sobic001G533100 Sobic002G125800 Sobic002G125800 Sobic001G131700--Sobic002G125800 Sobic007G172600 Sobic007G172600 Sobic001G131700--Sobic007G172600 Sobic001G471600 Sobic001G471600 Sobic001G131700--Sobic001G471600 Sobic001G073150 Sobic001G073150 Sobic001G131700--Sobic001G073150 Sobic008G125000 Sobic008G125000 Sobic001G131700--Sobic008G125000 Sobic010G120300--Sobic001G073150 Sobic010G120300--Sobic010G090500 Sobic009G251100 Sobic009G251100 Sobic010G120300--Sobic009G251100 Sobic001G159800 Sobic001G159800 Sobic010G120300--Sobic001G159800 Sobic008G174900 Sobic008G174900 Sobic010G120300--Sobic008G174900 Sobic010G120300--Sobic001G131700 Sobic003G267000 Sobic003G267000 Sobic010G120300--Sobic003G267000 Sobic009G125900 Sobic009G125900 Sobic010G120300--Sobic009G125900 Sobic001G021500 Sobic001G021500 Sobic010G120300--Sobic001G021500 Sobic010G090500--Sobic001G159800 Sobic010G090500--Sobic010G120300 Sobic009G206500 Sobic009G206500 Sobic010G090500--Sobic009G206500 Sobic009G079100 Sobic009G079100 Sobic010G090500--Sobic009G079100 Sobic001G437500 Sobic001G437500 Sobic010G090500--Sobic001G437500 Sobic006G267500 Sobic006G267500 Sobic010G090500--Sobic006G267500 Sobic010G090500--Sobic001G073150 Sobic009G061000 Sobic009G061000 Sobic010G090500--Sobic009G061000 Sobic010G090500--Sobic009G125900 Sobic001G115500 Sobic001G115500 Sobic002G264300--Sobic001G115500 Sobic010G073500 Sobic010G073500 Sobic002G264300--Sobic010G073500 Sobic002G126800 Sobic002G126800 Sobic002G264300--Sobic002G126800 Sobic009G151800 Sobic009G151800 Sobic002G264300--Sobic009G151800 Sobic001G373000 Sobic001G373000 Sobic002G264300--Sobic001G373000 Sobic001G008500 Sobic001G008500 Sobic002G264300--Sobic001G008500 Sobic004G030400 Sobic004G030400 Sobic002G264300--Sobic004G030400 Sobic006G071628 Sobic006G071628 Sobic002G264300--Sobic006G071628 Sobic004G075200 Sobic004G075200 Sobic002G264300--Sobic004G075200 Sobic001G533100--Sobic002G125800 Sobic005G031000 Sobic005G031000 Sobic001G533100--Sobic005G031000 Sobic004G034300 Sobic004G034300 Sobic001G533100--Sobic004G034300 Sobic004G336300 Sobic004G336300 Sobic001G533100--Sobic004G336300 Sobic003G130900 Sobic003G130900 Sobic001G533100--Sobic003G130900 Sobic002G426100 Sobic002G426100 Sobic001G533100--Sobic002G426100 Sobic005G129201 Sobic005G129201 Sobic001G533100--Sobic005G129201 Sobic007G173000 Sobic007G173000 Sobic001G533100--Sobic007G173000 Sobic003G005900 Sobic003G005900 Sobic001G533100--Sobic003G005900 Sobic002G125800--Sobic005G031000 Sobic006G237000 Sobic006G237000 Sobic002G125800--Sobic006G237000 Sobic002G125800--Sobic001G533100 Sobic001G200200 Sobic001G200200 Sobic002G125800--Sobic001G200200 Sobic001G004200 Sobic001G004200 Sobic002G125800--Sobic001G004200 Sobic004G356200 Sobic004G356200 Sobic002G125800--Sobic004G356200 Sobic010G192600 Sobic010G192600 Sobic002G125800--Sobic010G192600 Sobic003G166500 Sobic003G166500 Sobic002G125800--Sobic003G166500 Sobic002G125800--Sobic004G030400 Sobic007G172600--Sobic001G115500 Sobic008G125100 Sobic008G125100 Sobic007G172600--Sobic008G125100 Sobic007G172600--Sobic001G471600 Sobic008G135701 Sobic008G135701 Sobic007G172600--Sobic008G135701 Sobic002G317600 Sobic002G317600 Sobic007G172600--Sobic002G317600 Sobic008G083400 Sobic008G083400 Sobic007G172600--Sobic008G083400 Sobic009G122900 Sobic009G122900 Sobic007G172600--Sobic009G122900 Sobic004G067400 Sobic004G067400 Sobic007G172600--Sobic004G067400 Sobic001G469200 Sobic001G469200 Sobic007G172600--Sobic001G469200 Sobic006G216000 Sobic006G216000 Sobic001G471600--Sobic006G216000 Sobic001G471600--Sobic007G172600 Sobic002G253100 Sobic002G253100 Sobic001G471600--Sobic002G253100 Sobic007G119900 Sobic007G119900 Sobic001G471600--Sobic007G119900 Sobic004G133700 Sobic004G133700 Sobic001G471600--Sobic004G133700 Sobic001G471600--Sobic008G125100 Sobic001G152000 Sobic001G152000 Sobic001G471600--Sobic001G152000 Sobic010G055800 Sobic010G055800 Sobic001G471600--Sobic010G055800 Sobic009G056300 Sobic009G056300 Sobic001G471600--Sobic009G056300 Sobic001G073150--Sobic010G120300 Sobic001G073150--Sobic010G090500 Sobic003G198500 Sobic003G198500 Sobic001G073150--Sobic003G198500 Sobic008G191500 Sobic008G191500 Sobic001G073150--Sobic008G191500 Sobic010G096100 Sobic010G096100 Sobic001G073150--Sobic010G096100 Sobic001G073150--Sobic009G125900 Sobic001G073150--Sobic009G251100 Sobic001G073150--Sobic001G159800 Sobic001G073150--Sobic008G174900 Sobic008G125000--Sobic009G056300 Sobic008G125000--Sobic001G115500 Sobic006G245700 Sobic006G245700 Sobic008G125000--Sobic006G245700 Sobic003G307900 Sobic003G307900 Sobic008G125000--Sobic003G307900 Sobic008G125000--Sobic004G075200 Sobic009G120500 Sobic009G120500 Sobic008G125000--Sobic009G120500 Sobic007G010900 Sobic007G010900 Sobic008G125000--Sobic007G010900 Sobic006G041100 Sobic006G041100 Sobic008G125000--Sobic006G041100 Sobic004G358900 Sobic004G358900 Sobic008G125000--Sobic004G358900
Octagon: transcription factors


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