Gene annotation
Transcriptome id Sobic.003G332200.1
Synonym AREB3, Sb03g037740, DPBF3
Functional annotation bZIP transcription factor, putative, expressed
UniProt C5XN55
Pfam PF00170
Panther DB PTHR22952 PTHR22952:SF178
NCBI CDD -
KEGG Orthology K14432; ABA responsive element binding factor
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT3G56850 : ABA-responsive element binding protein 3
RAP-DB (Rice) LOC_Os01g59760.1 : bZIP transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a027125 , Zm00025a039807
Brachypodium PNT73071 , PNT73070 , KQK10263 , KQK10264 , KQK10265
Barley HORVU3Hr1G079640.3 , HORVU3Hr1G079640.1 , HORVU3Hr1G079640.6 , HORVU3Hr1G079640.5 , HORVU3Hr1G079640.4
Wheat TraesCS3B02G368300 , TraesCS3B02G368300 , TraesCS3D02G330300 , TraesCS3A02G337200 , TraesCS1A02G306300
Populus -


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cDNA sequences
Sobic.003G332200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G278600 FG-GAP repeat-containing protein, putative, expressed -
2 Sobic.005G199200 nuclear pore protein 84/107 containing protein, expressed K14301: NUP107, nuclear pore complex protein Nup107
3 Sobic.008G147200 tubulin, putative, expressed -
4 Sobic.007G056700 AP2/EREBP transcription factor BABY BOOM, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
5 Sobic.002G145800 flowering time control protein FCA, putative, expressed -
6 Sobic.010G096000 OsDegp10 - Putative Deg protease homologue, expressed -
7 Sobic.003G362900 Transcription initiation factor TFIID subunit A containing protein, expressed K03126: transcription initiation factor TFIID subunit 12
8 Sobic.010G239800 hydrolase, NUDIX family, domain containing protein, expressed K12613: mRNA-decapping enzyme subunit 2
9 Sobic.010G099800 growth regulator related protein, putative, expressed -
10 Sobic.001G085800 WD domain, G-beta repeat domain containing protein, expressed K14406: cleavage stimulation factor subunit 1
11 Sobic.002G408600 expressed protein -
12 Sobic.002G263700 bromodomain protein 103, putative, expressed -
13 Sobic.004G356200 expressed protein -
14 Sobic.006G280100 SET domain containing protein, expressed -
15 Sobic.006G269800 TFIIH basal transcription factor complex p52 subunit, putative, expressed K03144: TFIIH4, GTF2H4, transcription initiation factor TFIIH subunit 4
16 Sobic.001G090300 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
17 Sobic.010G279900 PHD-finger domain containing protein, expressed -
18 Sobic.007G183300 expressed protein -
19 Sobic.006G100800 expressed protein -
20 Sobic.001G023000 kelch motif family protein, putative, expressed -


Gene co-expression network
sample Sobic003G332200 Sobic003G332200 Sobic010G278600 Sobic010G278600 Sobic003G332200--Sobic010G278600 Sobic005G199200 Sobic005G199200 Sobic003G332200--Sobic005G199200 Sobic008G147200 Sobic008G147200 Sobic003G332200--Sobic008G147200 Sobic007G056700 Sobic007G056700 Sobic003G332200--Sobic007G056700 Sobic002G145800 Sobic002G145800 Sobic003G332200--Sobic002G145800 Sobic010G096000 Sobic010G096000 Sobic003G332200--Sobic010G096000 Sobic003G362900 Sobic003G362900 Sobic003G332200--Sobic003G362900 Sobic010G239800 Sobic010G239800 Sobic003G332200--Sobic010G239800 Sobic010G099800 Sobic010G099800 Sobic003G332200--Sobic010G099800 Sobic009G040800 Sobic009G040800 Sobic010G278600--Sobic009G040800 Sobic009G074700 Sobic009G074700 Sobic010G278600--Sobic009G074700 Sobic002G408600 Sobic002G408600 Sobic010G278600--Sobic002G408600 Sobic004G285000 Sobic004G285000 Sobic010G278600--Sobic004G285000 Sobic004G236800 Sobic004G236800 Sobic010G278600--Sobic004G236800 Sobic004G246100 Sobic004G246100 Sobic010G278600--Sobic004G246100 Sobic001G042200 Sobic001G042200 Sobic010G278600--Sobic001G042200 Sobic006G131200 Sobic006G131200 Sobic010G278600--Sobic006G131200 Sobic001G393700 Sobic001G393700 Sobic010G278600--Sobic001G393700 Sobic001G090300 Sobic001G090300 Sobic005G199200--Sobic001G090300 Sobic003G184400 Sobic003G184400 Sobic005G199200--Sobic003G184400 Sobic004G128200 Sobic004G128200 Sobic005G199200--Sobic004G128200 Sobic001G334100 Sobic001G334100 Sobic005G199200--Sobic001G334100 Sobic009G104900 Sobic009G104900 Sobic005G199200--Sobic009G104900 Sobic001G373000 Sobic001G373000 Sobic005G199200--Sobic001G373000 Sobic005G199200--Sobic010G278600 Sobic002G142600 Sobic002G142600 Sobic005G199200--Sobic002G142600 Sobic003G246000 Sobic003G246000 Sobic005G199200--Sobic003G246000 Sobic004G321700 Sobic004G321700 Sobic008G147200--Sobic004G321700 Sobic005G137700 Sobic005G137700 Sobic008G147200--Sobic005G137700 Sobic006G269800 Sobic006G269800 Sobic008G147200--Sobic006G269800 Sobic010G186600 Sobic010G186600 Sobic008G147200--Sobic010G186600 Sobic008G147200--Sobic002G145800 Sobic010G007100 Sobic010G007100 Sobic008G147200--Sobic010G007100 Sobic001G346900 Sobic001G346900 Sobic008G147200--Sobic001G346900 Sobic003G042400 Sobic003G042400 Sobic008G147200--Sobic003G042400 Sobic001G291800 Sobic001G291800 Sobic008G147200--Sobic001G291800 Sobic007G056700--Sobic010G096000 Sobic003G241200 Sobic003G241200 Sobic007G056700--Sobic003G241200 Sobic009G126600 Sobic009G126600 Sobic007G056700--Sobic009G126600 Sobic001G267900 Sobic001G267900 Sobic007G056700--Sobic001G267900 Sobic001G518400 Sobic001G518400 Sobic007G056700--Sobic001G518400 Sobic003G205501 Sobic003G205501 Sobic007G056700--Sobic003G205501 Sobic007G056700--Sobic009G074700 Sobic001G085700 Sobic001G085700 Sobic007G056700--Sobic001G085700 Sobic010G204400 Sobic010G204400 Sobic007G056700--Sobic010G204400 Sobic002G145800--Sobic006G269800 Sobic003G416700 Sobic003G416700 Sobic002G145800--Sobic003G416700 Sobic007G183300 Sobic007G183300 Sobic002G145800--Sobic007G183300 Sobic001G087600 Sobic001G087600 Sobic002G145800--Sobic001G087600 Sobic001G051700 Sobic001G051700 Sobic002G145800--Sobic001G051700 Sobic003G062300 Sobic003G062300 Sobic002G145800--Sobic003G062300 Sobic002G145800--Sobic008G147200 Sobic001G023000 Sobic001G023000 Sobic002G145800--Sobic001G023000 Sobic002G145800--Sobic010G186600 Sobic001G246500 Sobic001G246500 Sobic010G096000--Sobic001G246500 Sobic008G100100 Sobic008G100100 Sobic010G096000--Sobic008G100100 Sobic004G086200 Sobic004G086200 Sobic010G096000--Sobic004G086200 Sobic001G306900 Sobic001G306900 Sobic010G096000--Sobic001G306900 Sobic010G096000--Sobic001G346900 Sobic008G173100 Sobic008G173100 Sobic010G096000--Sobic008G173100 Sobic010G096000--Sobic003G416700 Sobic001G155400 Sobic001G155400 Sobic010G096000--Sobic001G155400 Sobic010G096000--Sobic008G147200 Sobic003G362900--Sobic004G321700 Sobic001G393900 Sobic001G393900 Sobic003G362900--Sobic001G393900 Sobic003G362900--Sobic002G145800 Sobic002G052700 Sobic002G052700 Sobic003G362900--Sobic002G052700 Sobic003G362900--Sobic008G147200 Sobic003G362900--Sobic004G285000 Sobic003G362900--Sobic006G269800 Sobic004G309900 Sobic004G309900 Sobic003G362900--Sobic004G309900 Sobic007G011600 Sobic007G011600 Sobic003G362900--Sobic007G011600 Sobic003G099300 Sobic003G099300 Sobic010G239800--Sobic003G099300 Sobic007G027700 Sobic007G027700 Sobic010G239800--Sobic007G027700 Sobic010G085200 Sobic010G085200 Sobic010G239800--Sobic010G085200 Sobic010G269100 Sobic010G269100 Sobic010G239800--Sobic010G269100 Sobic006G233300 Sobic006G233300 Sobic010G239800--Sobic006G233300 Sobic010G232900 Sobic010G232900 Sobic010G239800--Sobic010G232900 Sobic010G279700 Sobic010G279700 Sobic010G239800--Sobic010G279700 Sobic008G092300 Sobic008G092300 Sobic010G239800--Sobic008G092300 Sobic010G239800--Sobic002G145800 Sobic010G099800--Sobic001G393700 Sobic003G240700 Sobic003G240700 Sobic010G099800--Sobic003G240700 Sobic001G474400 Sobic001G474400 Sobic010G099800--Sobic001G474400 Sobic009G045200 Sobic009G045200 Sobic010G099800--Sobic009G045200 Sobic003G405500 Sobic003G405500 Sobic010G099800--Sobic003G405500 Sobic010G099800--Sobic010G278600 Sobic001G335900 Sobic001G335900 Sobic010G099800--Sobic001G335900 Sobic010G099800--Sobic001G051700 Sobic002G430300 Sobic002G430300 Sobic010G099800--Sobic002G430300
Octagon: transcription factors


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