Gene annotation
Transcriptome id Sobic.003G286800.2
Synonym Sb03g033755
Functional annotation expressed protein
UniProt A0A1W0VZD6
Pfam -
Panther DB PTHR33065 PTHR33065:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g38380.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G097500 expressed protein -
2 Sobic.006G109500 aldehyde dehydrogenase, putative, expressed K00130: betB, betaine-aldehyde dehydrogenase
3 Sobic.007G099966 - -
4 Sobic.001G131700 expressed protein -
5 Sobic.002G312700 myosin heavy chain-related, putative, expressed -
6 Sobic.003G161500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
7 Sobic.005G183200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
8 Sobic.002G247200 jmjC domain-containing protein 5, putative, expressed K10277: KDM8, lysine-specific demethylase 8
9 Sobic.009G079100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
10 Sobic.001G316000 protein kinase domain containing protein, expressed -
11 Sobic.008G174800 DNA binding protein, putative, expressed -
12 Sobic.003G051100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
13 Sobic.004G185200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@homeobox associated leucine zipper, putative, expressed -
14 Sobic.004G116500 expressed protein -
15 Sobic.010G090500 expressed protein -
16 Sobic.010G120300 tm-1GCR237 protein, putative, expressed -
17 Sobic.003G194400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
18 Sobic.007G156800 "SGL1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659907)@expressed protein -
19 Sobic.003G056000 staphylococcal nuclease homologue, putative, expressed -
20 Sobic.004G161200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins


Gene co-expression network
sample Sobic003G286800 Sobic003G286800 Sobic008G097500 Sobic008G097500 Sobic003G286800--Sobic008G097500 Sobic006G109500 Sobic006G109500 Sobic003G286800--Sobic006G109500 Sobic007G099966 Sobic007G099966 Sobic003G286800--Sobic007G099966 Sobic001G131700 Sobic001G131700 Sobic003G286800--Sobic001G131700 Sobic002G312700 Sobic002G312700 Sobic003G286800--Sobic002G312700 Sobic003G161500 Sobic003G161500 Sobic003G286800--Sobic003G161500 Sobic005G183200 Sobic005G183200 Sobic003G286800--Sobic005G183200 Sobic002G247200 Sobic002G247200 Sobic003G286800--Sobic002G247200 Sobic009G079100 Sobic009G079100 Sobic003G286800--Sobic009G079100 Sobic010G022400 Sobic010G022400 Sobic008G097500--Sobic010G022400 Sobic004G034200 Sobic004G034200 Sobic008G097500--Sobic004G034200 Sobic003G134900 Sobic003G134900 Sobic008G097500--Sobic003G134900 Sobic001G316000 Sobic001G316000 Sobic008G097500--Sobic001G316000 Sobic008G097500--Sobic002G312700 Sobic003G056000 Sobic003G056000 Sobic008G097500--Sobic003G056000 Sobic008G097500--Sobic003G286800 Sobic003G198500 Sobic003G198500 Sobic008G097500--Sobic003G198500 Sobic001G336700 Sobic001G336700 Sobic008G097500--Sobic001G336700 Sobic006G109500--Sobic002G312700 Sobic002G271300 Sobic002G271300 Sobic006G109500--Sobic002G271300 Sobic006G109500--Sobic003G161500 Sobic007G172500 Sobic007G172500 Sobic006G109500--Sobic007G172500 Sobic010G090500 Sobic010G090500 Sobic006G109500--Sobic010G090500 Sobic006G109500--Sobic009G079100 Sobic009G073400 Sobic009G073400 Sobic006G109500--Sobic009G073400 Sobic008G043500 Sobic008G043500 Sobic006G109500--Sobic008G043500 Sobic003G132500 Sobic003G132500 Sobic006G109500--Sobic003G132500 Sobic004G185200 Sobic004G185200 Sobic007G099966--Sobic004G185200 Sobic007G099966--Sobic003G286800 Sobic001G297200 Sobic001G297200 Sobic007G099966--Sobic001G297200 Sobic007G099966--Sobic003G056000 Sobic002G423700 Sobic002G423700 Sobic007G099966--Sobic002G423700 Sobic003G194400 Sobic003G194400 Sobic007G099966--Sobic003G194400 Sobic010G172700 Sobic010G172700 Sobic007G099966--Sobic010G172700 Sobic002G385800 Sobic002G385800 Sobic007G099966--Sobic002G385800 Sobic004G116500 Sobic004G116500 Sobic007G099966--Sobic004G116500 Sobic010G120300 Sobic010G120300 Sobic001G131700--Sobic010G120300 Sobic001G131700--Sobic010G090500 Sobic002G264300 Sobic002G264300 Sobic001G131700--Sobic002G264300 Sobic001G533100 Sobic001G533100 Sobic001G131700--Sobic001G533100 Sobic002G125800 Sobic002G125800 Sobic001G131700--Sobic002G125800 Sobic007G172600 Sobic007G172600 Sobic001G131700--Sobic007G172600 Sobic001G471600 Sobic001G471600 Sobic001G131700--Sobic001G471600 Sobic001G073150 Sobic001G073150 Sobic001G131700--Sobic001G073150 Sobic008G125000 Sobic008G125000 Sobic001G131700--Sobic008G125000 Sobic002G312700--Sobic007G172500 Sobic002G312700--Sobic003G198500 Sobic002G312700--Sobic006G109500 Sobic005G022500 Sobic005G022500 Sobic002G312700--Sobic005G022500 Sobic002G312700--Sobic010G090500 Sobic002G312700--Sobic009G079100 Sobic007G106500 Sobic007G106500 Sobic002G312700--Sobic007G106500 Sobic004G161200 Sobic004G161200 Sobic002G312700--Sobic004G161200 Sobic002G312700--Sobic008G097500 Sobic004G274800 Sobic004G274800 Sobic003G161500--Sobic004G274800 Sobic009G206500 Sobic009G206500 Sobic003G161500--Sobic009G206500 Sobic006G281400 Sobic006G281400 Sobic003G161500--Sobic006G281400 Sobic002G318300 Sobic002G318300 Sobic003G161500--Sobic002G318300 Sobic003G052100 Sobic003G052100 Sobic003G161500--Sobic003G052100 Sobic008G032800 Sobic008G032800 Sobic003G161500--Sobic008G032800 Sobic007G139500 Sobic007G139500 Sobic003G161500--Sobic007G139500 Sobic003G161500--Sobic006G109500 Sobic003G369200 Sobic003G369200 Sobic003G161500--Sobic003G369200 Sobic005G183200--Sobic003G194400 Sobic003G011400 Sobic003G011400 Sobic005G183200--Sobic003G011400 Sobic006G114700 Sobic006G114700 Sobic005G183200--Sobic006G114700 Sobic010G101300 Sobic010G101300 Sobic005G183200--Sobic010G101300 Sobic001G200700 Sobic001G200700 Sobic005G183200--Sobic001G200700 Sobic003G292400 Sobic003G292400 Sobic005G183200--Sobic003G292400 Sobic009G116700 Sobic009G116700 Sobic005G183200--Sobic009G116700 Sobic005G088700 Sobic005G088700 Sobic005G183200--Sobic005G088700 Sobic001G323600 Sobic001G323600 Sobic005G183200--Sobic001G323600 Sobic003G051100 Sobic003G051100 Sobic002G247200--Sobic003G051100 Sobic001G429200 Sobic001G429200 Sobic002G247200--Sobic001G429200 Sobic001G346700 Sobic001G346700 Sobic002G247200--Sobic001G346700 Sobic008G169800 Sobic008G169800 Sobic002G247200--Sobic008G169800 Sobic003G415100 Sobic003G415100 Sobic002G247200--Sobic003G415100 Sobic001G116100 Sobic001G116100 Sobic002G247200--Sobic001G116100 Sobic005G180800 Sobic005G180800 Sobic002G247200--Sobic005G180800 Sobic006G203200 Sobic006G203200 Sobic002G247200--Sobic006G203200 Sobic001G218200 Sobic001G218200 Sobic002G247200--Sobic001G218200 Sobic009G079100--Sobic010G090500 Sobic009G079100--Sobic003G198500 Sobic009G026101 Sobic009G026101 Sobic009G079100--Sobic009G026101 Sobic004G051300 Sobic004G051300 Sobic009G079100--Sobic004G051300 Sobic007G040301 Sobic007G040301 Sobic009G079100--Sobic007G040301 Sobic007G211600 Sobic007G211600 Sobic009G079100--Sobic007G211600 Sobic001G133900 Sobic001G133900 Sobic009G079100--Sobic001G133900 Sobic009G246700 Sobic009G246700 Sobic009G079100--Sobic009G246700 Sobic009G079100--Sobic009G206500
Octagon: transcription factors


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