Gene annotation
Transcriptome id Sobic.004G116500.1,Sobic.004G116500.2,Sobic.004G116500.3
Synonym Sb04g009710
Functional annotation expressed protein
UniProt A0A194YQ69 , A0A1Z5RLX9 , A0A194YP52
Pfam -
Panther DB PTHR31071 PTHR31071:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G41620 : -
RAP-DB (Rice) LOC_Os02g15980.1 : expressed protein
MaizeGDB (Corn) Zm00025a034388
Brachypodium PNT66299 , KQJ94305
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G120600 Highest expression level in embryo(PubMedID : 27501690)@OsSPL19 - SBP-box gene family member, expressed -
2 Sobic.010G221200 neurochondrin family protein, putative, expressed -
3 Sobic.004G248700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.002G416150 - -
5 Sobic.001G268700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lysosomal alpha-mannosidase precursor, putative, expressed K01191: alpha-mannosidase
6 Sobic.004G289500 - -
7 Sobic.006G269600 zinc finger, RING-type, putative, expressed -
8 Sobic.009G155900 hhH-GPD superfamily base excision DNA repair protein, expressed -
9 Sobic.002G050500 type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed -
10 Sobic.004G085300 Sel1 repeat domain containing protein, putative, expressed -
11 Sobic.001G179900 DCL2, putative, expressed K11592: DICER1, endoribonuclease Dicer
12 Sobic.002G140800 RNA pseudouridine synthase, putative, expressed -
13 Sobic.001G372900 expressed protein K08819: cyclin-dependent kinase 12/13
14 Sobic.002G341200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STRUBBELIG-RECEPTOR FAMILY 1 precursor, putative, expressed -
15 Sobic.004G057700 zinc-binding protein, putative, expressed -
16 Sobic.006G084300 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
17 Sobic.001G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@squalene synthetase, putative, expressed K00801: farnesyl-diphosphate farnesyltransferase
18 Sobic.003G147500 PHS1, putative, expressed K14165: atypical dual specificity phosphatase
19 Sobic.002G316800 3\'-5\' exonuclease, putative, expressed K12951: cobalt/nickel-transporting P-type ATPase D
20 Sobic.006G088400 OsFBX135 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic004G116500 Sobic004G116500 Sobic005G120600 Sobic005G120600 Sobic004G116500--Sobic005G120600 Sobic010G221200 Sobic010G221200 Sobic004G116500--Sobic010G221200 Sobic004G248700 Sobic004G248700 Sobic004G116500--Sobic004G248700 Sobic002G416150 Sobic002G416150 Sobic004G116500--Sobic002G416150 Sobic001G268700 Sobic001G268700 Sobic004G116500--Sobic001G268700 Sobic004G289500 Sobic004G289500 Sobic004G116500--Sobic004G289500 Sobic006G269600 Sobic006G269600 Sobic004G116500--Sobic006G269600 Sobic009G155900 Sobic009G155900 Sobic004G116500--Sobic009G155900 Sobic002G050500 Sobic002G050500 Sobic004G116500--Sobic002G050500 Sobic005G120600--Sobic004G116500 Sobic005G120600--Sobic001G268700 Sobic005G120600--Sobic010G221200 Sobic004G141000 Sobic004G141000 Sobic005G120600--Sobic004G141000 Sobic005G120600--Sobic002G416150 Sobic010G013500 Sobic010G013500 Sobic005G120600--Sobic010G013500 Sobic005G139300 Sobic005G139300 Sobic005G120600--Sobic005G139300 Sobic002G002500 Sobic002G002500 Sobic005G120600--Sobic002G002500 Sobic004G286250 Sobic004G286250 Sobic005G120600--Sobic004G286250 Sobic010G221200--Sobic004G116500 Sobic010G221200--Sobic001G268700 Sobic010G221200--Sobic005G120600 Sobic003G102700 Sobic003G102700 Sobic010G221200--Sobic003G102700 Sobic010G221200--Sobic010G013500 Sobic001G372900 Sobic001G372900 Sobic010G221200--Sobic001G372900 Sobic006G084300 Sobic006G084300 Sobic010G221200--Sobic006G084300 Sobic010G221200--Sobic002G416150 Sobic009G028100 Sobic009G028100 Sobic010G221200--Sobic009G028100 Sobic004G248700--Sobic004G116500 Sobic004G248700--Sobic009G155900 Sobic003G434300 Sobic003G434300 Sobic004G248700--Sobic003G434300 Sobic004G057700 Sobic004G057700 Sobic004G248700--Sobic004G057700 Sobic005G138000 Sobic005G138000 Sobic004G248700--Sobic005G138000 Sobic004G244200 Sobic004G244200 Sobic004G248700--Sobic004G244200 Sobic007G143800 Sobic007G143800 Sobic004G248700--Sobic007G143800 Sobic004G248700--Sobic005G120600 Sobic009G000600 Sobic009G000600 Sobic004G248700--Sobic009G000600 Sobic002G416150--Sobic004G116500 Sobic006G088400 Sobic006G088400 Sobic002G416150--Sobic006G088400 Sobic001G264201 Sobic001G264201 Sobic002G416150--Sobic001G264201 Sobic002G416150--Sobic005G120600 Sobic002G416150--Sobic005G139300 Sobic004G353400 Sobic004G353400 Sobic002G416150--Sobic004G353400 Sobic009G224300 Sobic009G224300 Sobic002G416150--Sobic009G224300 Sobic002G416150--Sobic010G221200 Sobic002G416150--Sobic009G155900 Sobic001G268700--Sobic002G050500 Sobic001G268700--Sobic010G221200 Sobic001G268700--Sobic005G120600 Sobic001G268700--Sobic004G116500 Sobic003G107900 Sobic003G107900 Sobic001G268700--Sobic003G107900 Sobic002G223300 Sobic002G223300 Sobic001G268700--Sobic002G223300 Sobic001G268700--Sobic001G372900 Sobic010G063566 Sobic010G063566 Sobic001G268700--Sobic010G063566 Sobic008G100400 Sobic008G100400 Sobic001G268700--Sobic008G100400 Sobic004G289500--Sobic006G269600 Sobic002G073300 Sobic002G073300 Sobic004G289500--Sobic002G073300 Sobic002G140800 Sobic002G140800 Sobic004G289500--Sobic002G140800 Sobic010G139301 Sobic010G139301 Sobic004G289500--Sobic010G139301 Sobic004G286900 Sobic004G286900 Sobic004G289500--Sobic004G286900 Sobic006G063300 Sobic006G063300 Sobic004G289500--Sobic006G063300 Sobic004G193800 Sobic004G193800 Sobic004G289500--Sobic004G193800 Sobic004G289500--Sobic002G050500 Sobic008G086200 Sobic008G086200 Sobic004G289500--Sobic008G086200 Sobic006G269600--Sobic004G289500 Sobic006G269600--Sobic002G073300 Sobic002G177400 Sobic002G177400 Sobic006G269600--Sobic002G177400 Sobic006G269600--Sobic002G050500 Sobic009G059600 Sobic009G059600 Sobic006G269600--Sobic009G059600 Sobic006G210200 Sobic006G210200 Sobic006G269600--Sobic006G210200 Sobic003G420201 Sobic003G420201 Sobic006G269600--Sobic003G420201 Sobic006G269600--Sobic010G139301 Sobic004G088400 Sobic004G088400 Sobic006G269600--Sobic004G088400 Sobic008G165300 Sobic008G165300 Sobic009G155900--Sobic008G165300 Sobic002G127900 Sobic002G127900 Sobic009G155900--Sobic002G127900 Sobic008G165266 Sobic008G165266 Sobic009G155900--Sobic008G165266 Sobic002G429700 Sobic002G429700 Sobic009G155900--Sobic002G429700 Sobic009G155900--Sobic009G224300 Sobic009G155900--Sobic005G138000 Sobic009G155900--Sobic004G248700 Sobic009G155900--Sobic003G434300 Sobic002G266300 Sobic002G266300 Sobic009G155900--Sobic002G266300 Sobic002G050500--Sobic006G210200 Sobic002G050500--Sobic001G268700 Sobic002G050500--Sobic002G140800 Sobic008G056350 Sobic008G056350 Sobic002G050500--Sobic008G056350 Sobic001G045700 Sobic001G045700 Sobic002G050500--Sobic001G045700 Sobic002G060450 Sobic002G060450 Sobic002G050500--Sobic002G060450 Sobic001G454301 Sobic001G454301 Sobic002G050500--Sobic001G454301 Sobic002G050500--Sobic002G223300 Sobic003G128600 Sobic003G128600 Sobic002G050500--Sobic003G128600
Octagon: transcription factors


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