Gene annotation
Transcriptome id Sobic.006G088400.2,Sobic.006G088400.1
Synonym Sb06g017410
Functional annotation OsFBX135 - F-box domain containing protein, expressed
UniProt C5Y8T8
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF75
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G18150 : RNI-like superfamily protein
RAP-DB (Rice) LOC_Os04g35940.1 : OsFBX135 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a011282
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G002700 WD domain, G-beta repeat domain containing protein, expressed K11806: DCAF13, DDB1- and CUL4-associated factor 13
2 Sobic.002G416150 - -
3 Sobic.002G429700 AMP deaminase, putative, expressed K01490: AMP deaminase
4 Sobic.009G053101 - -
5 Sobic.003G075400 expressed protein K07466: RFA1, RPA1, replication factor A1
6 Sobic.007G101100 - -
7 Sobic.010G257000 two-component response regulator, putative, expressed -
8 Sobic.010G175000 expressed protein -
9 Sobic.005G078700 OsFBX411 - F-box domain containing protein, expressed -
10 Sobic.002G127900 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
11 Sobic.004G116500 expressed protein -
12 Sobic.009G155900 hhH-GPD superfamily base excision DNA repair protein, expressed -
13 Sobic.002G114000 GAGA-binding protein, putative, expressed -
14 Sobic.001G264201 - -
15 Sobic.004G353400 leucine-rich repeat-containing protein 40, putative, expressed -
16 Sobic.006G091000 hydrolase, alpha/beta fold family domain containing protein, expressed K13617: protein phosphatase methylesterase 1
17 Sobic.003G325900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat, putative, expressed -
18 Sobic.010G098600 heat shock protein DnaJ, putative, expressed -
19 Sobic.004G282500 PPR repeat domain containing protein, putative, expressed -
20 Sobic.007G174900 carrier, putative, expressed -


Gene co-expression network
sample Sobic006G088400 Sobic006G088400 Sobic003G002700 Sobic003G002700 Sobic006G088400--Sobic003G002700 Sobic002G416150 Sobic002G416150 Sobic006G088400--Sobic002G416150 Sobic002G429700 Sobic002G429700 Sobic006G088400--Sobic002G429700 Sobic009G053101 Sobic009G053101 Sobic006G088400--Sobic009G053101 Sobic003G075400 Sobic003G075400 Sobic006G088400--Sobic003G075400 Sobic007G101100 Sobic007G101100 Sobic006G088400--Sobic007G101100 Sobic010G257000 Sobic010G257000 Sobic006G088400--Sobic010G257000 Sobic010G175000 Sobic010G175000 Sobic006G088400--Sobic010G175000 Sobic005G078700 Sobic005G078700 Sobic006G088400--Sobic005G078700 Sobic006G091000 Sobic006G091000 Sobic003G002700--Sobic006G091000 Sobic003G002700--Sobic006G088400 Sobic010G172400 Sobic010G172400 Sobic003G002700--Sobic010G172400 Sobic001G033900 Sobic001G033900 Sobic003G002700--Sobic001G033900 Sobic005G178950 Sobic005G178950 Sobic003G002700--Sobic005G178950 Sobic004G282500 Sobic004G282500 Sobic003G002700--Sobic004G282500 Sobic007G212800 Sobic007G212800 Sobic003G002700--Sobic007G212800 Sobic003G002700--Sobic005G078700 Sobic010G063566 Sobic010G063566 Sobic003G002700--Sobic010G063566 Sobic004G116500 Sobic004G116500 Sobic002G416150--Sobic004G116500 Sobic002G416150--Sobic006G088400 Sobic001G264201 Sobic001G264201 Sobic002G416150--Sobic001G264201 Sobic005G120600 Sobic005G120600 Sobic002G416150--Sobic005G120600 Sobic005G139300 Sobic005G139300 Sobic002G416150--Sobic005G139300 Sobic004G353400 Sobic004G353400 Sobic002G416150--Sobic004G353400 Sobic009G224300 Sobic009G224300 Sobic002G416150--Sobic009G224300 Sobic010G221200 Sobic010G221200 Sobic002G416150--Sobic010G221200 Sobic009G155900 Sobic009G155900 Sobic002G416150--Sobic009G155900 Sobic002G429700--Sobic009G155900 Sobic003G368901 Sobic003G368901 Sobic002G429700--Sobic003G368901 Sobic002G127900 Sobic002G127900 Sobic002G429700--Sobic002G127900 Sobic004G031300 Sobic004G031300 Sobic002G429700--Sobic004G031300 Sobic007G187900 Sobic007G187900 Sobic002G429700--Sobic007G187900 Sobic002G429700--Sobic006G088400 Sobic001G039300 Sobic001G039300 Sobic002G429700--Sobic001G039300 Sobic002G429700--Sobic003G002700 Sobic001G542300 Sobic001G542300 Sobic002G429700--Sobic001G542300 Sobic009G239301 Sobic009G239301 Sobic009G053101--Sobic009G239301 Sobic002G140800 Sobic002G140800 Sobic009G053101--Sobic002G140800 Sobic009G053101--Sobic006G088400 Sobic009G239351 Sobic009G239351 Sobic009G053101--Sobic009G239351 Sobic009G053101--Sobic002G416150 Sobic001G454301 Sobic001G454301 Sobic009G053101--Sobic001G454301 Sobic001G179900 Sobic001G179900 Sobic009G053101--Sobic001G179900 Sobic006G217200 Sobic006G217200 Sobic009G053101--Sobic006G217200 Sobic008G056350 Sobic008G056350 Sobic009G053101--Sobic008G056350 Sobic010G077300 Sobic010G077300 Sobic003G075400--Sobic010G077300 Sobic004G066500 Sobic004G066500 Sobic003G075400--Sobic004G066500 Sobic003G075400--Sobic010G175000 Sobic010G222900 Sobic010G222900 Sobic003G075400--Sobic010G222900 Sobic003G095800 Sobic003G095800 Sobic003G075400--Sobic003G095800 Sobic001G092800 Sobic001G092800 Sobic003G075400--Sobic001G092800 Sobic003G075400--Sobic006G088400 Sobic004G234300 Sobic004G234300 Sobic003G075400--Sobic004G234300 Sobic006G275500 Sobic006G275500 Sobic003G075400--Sobic006G275500 Sobic007G101100--Sobic006G088400 Sobic007G101100--Sobic005G078700 Sobic007G101100--Sobic004G282500 Sobic010G098600 Sobic010G098600 Sobic007G101100--Sobic010G098600 Sobic003G325900 Sobic003G325900 Sobic007G101100--Sobic003G325900 Sobic003G184666 Sobic003G184666 Sobic007G101100--Sobic003G184666 Sobic007G101100--Sobic010G175000 Sobic008G123200 Sobic008G123200 Sobic007G101100--Sobic008G123200 Sobic004G038850 Sobic004G038850 Sobic007G101100--Sobic004G038850 Sobic009G188900 Sobic009G188900 Sobic010G257000--Sobic009G188900 Sobic010G257000--Sobic010G175000 Sobic002G168000 Sobic002G168000 Sobic010G257000--Sobic002G168000 Sobic010G257000--Sobic009G224300 Sobic001G027500 Sobic001G027500 Sobic010G257000--Sobic001G027500 Sobic008G048966 Sobic008G048966 Sobic010G257000--Sobic008G048966 Sobic006G281900 Sobic006G281900 Sobic010G257000--Sobic006G281900 Sobic010G250400 Sobic010G250400 Sobic010G257000--Sobic010G250400 Sobic006G016700 Sobic006G016700 Sobic010G257000--Sobic006G016700 Sobic004G192500 Sobic004G192500 Sobic010G175000--Sobic004G192500 Sobic010G175000--Sobic010G257000 Sobic006G226000 Sobic006G226000 Sobic010G175000--Sobic006G226000 Sobic010G175000--Sobic009G188900 Sobic010G175000--Sobic006G281900 Sobic010G175000--Sobic006G275500 Sobic010G175000--Sobic006G016700 Sobic010G175000--Sobic002G168000 Sobic002G055800 Sobic002G055800 Sobic010G175000--Sobic002G055800 Sobic005G078700--Sobic003G325900 Sobic010G143600 Sobic010G143600 Sobic005G078700--Sobic010G143600 Sobic005G078700--Sobic003G184666 Sobic001G268300 Sobic001G268300 Sobic005G078700--Sobic001G268300 Sobic002G362200 Sobic002G362200 Sobic005G078700--Sobic002G362200 Sobic006G262800 Sobic006G262800 Sobic005G078700--Sobic006G262800 Sobic005G078700--Sobic004G282500 Sobic009G154900 Sobic009G154900 Sobic005G078700--Sobic009G154900 Sobic009G105400 Sobic009G105400 Sobic005G078700--Sobic009G105400
Octagon: transcription factors


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