Gene annotation
Transcriptome id Sobic.010G098600.1
Synonym Sb10g008580, ARL1
Functional annotation heat shock protein DnaJ, putative, expressed
UniProt C5Z7H9
Pfam PF00226
Panther DB PTHR24078 PTHR24078:SF303
NCBI CDD KOG0713; Molecular chaperone (DnaJ superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G24120 : ARG1-like 1
RAP-DB (Rice) LOC_Os06g13060.1 : heat shock protein DnaJ, putative, expressed
MaizeGDB (Corn) Zm00025a042635
Brachypodium KQK01985 , KQK18800
Barley HORVU7Hr1G039640.3 , HORVU7Hr1G039640.2 , HORVU7Hr1G039640.1 , HORVU7Hr1G039640.7 , HORVU7Hr1G039640.6 , HORVU7Hr1G039640.5 , HORVU7Hr1G039640.4 , HORVU7Hr1G039640.9 , HORVU7Hr1G039640.8 , HORVU7Hr1G039640.22 , HORVU7Hr1G039640.23 , HORVU7Hr1G039640.20 , HORVU7Hr1G039640.21 , HORVU7Hr1G039640.24 , HORVU7Hr1G039640.13 , HORVU7Hr1G039640.12 , HORVU7Hr1G039640.11 , HORVU7Hr1G039640.10 , HORVU7Hr1G039640.17 , HORVU7Hr1G039640.16 , HORVU7Hr1G039640.15 , HORVU7Hr1G039640.14 , HORVU7Hr1G039640.19 , HORVU7Hr1G039640.18 , HORVU6Hr1G076490.10 , HORVU6Hr1G076490.11 , HORVU6Hr1G076490.12 , HORVU6Hr1G076490.13 , HORVU6Hr1G076490.8 , HORVU6Hr1G076490.9 , HORVU6Hr1G076490.6 , HORVU6Hr1G076490.7 , HORVU6Hr1G076490.4 , HORVU6Hr1G076490.2 , HORVU6Hr1G076490.3 , HORVU6Hr1G076490.1
Wheat TraesCS6D02G289600 , TraesCS6B02G340100 , TraesCS7D02G196200 , TraesCS6A02G310200 , TraesCS7B02G498100 , TraesCS7A02G194600 , TraesCS7B02G100200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G078700 OsFBX411 - F-box domain containing protein, expressed -
2 Sobic.007G053400 nuclear matrix protein 1, putative, expressed -
3 Sobic.003G173400 tetratricopeptide repeat protein 5, putative, expressed -
4 Sobic.002G362200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MSH-like DNA mismatch repair protein, putative, expressed K08735: DNA mismatch repair protein MSH2
5 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
6 Sobic.002G293700 ATXR, putative, expressed -
7 Sobic.001G494100 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
8 Sobic.001G140700 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
9 Sobic.008G086200 expressed protein -
10 Sobic.003G397100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
11 Sobic.001G290500 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
12 Sobic.010G046400 glyoxalase/bleomycin resistance protein/dioxygenase, putative, expressed -
13 Sobic.006G084300 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
14 Sobic.008G169400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed -
15 Sobic.002G260700 ARF GTPase-activating domain-containing protein, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
16 Sobic.001G361800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@proline-rich family protein, putative, expressed -
17 Sobic.004G199700 expressed protein -
18 Sobic.001G361200 expressed protein -
19 Sobic.006G094100 expressed protein -
20 Sobic.007G031300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -


Gene co-expression network
sample Sobic010G098600 Sobic010G098600 Sobic005G078700 Sobic005G078700 Sobic010G098600--Sobic005G078700 Sobic007G053400 Sobic007G053400 Sobic010G098600--Sobic007G053400 Sobic003G173400 Sobic003G173400 Sobic010G098600--Sobic003G173400 Sobic002G362200 Sobic002G362200 Sobic010G098600--Sobic002G362200 Sobic009G212100 Sobic009G212100 Sobic010G098600--Sobic009G212100 Sobic002G293700 Sobic002G293700 Sobic010G098600--Sobic002G293700 Sobic001G494100 Sobic001G494100 Sobic010G098600--Sobic001G494100 Sobic001G140700 Sobic001G140700 Sobic010G098600--Sobic001G140700 Sobic008G086200 Sobic008G086200 Sobic010G098600--Sobic008G086200 Sobic003G325900 Sobic003G325900 Sobic005G078700--Sobic003G325900 Sobic010G143600 Sobic010G143600 Sobic005G078700--Sobic010G143600 Sobic003G184666 Sobic003G184666 Sobic005G078700--Sobic003G184666 Sobic001G268300 Sobic001G268300 Sobic005G078700--Sobic001G268300 Sobic005G078700--Sobic002G362200 Sobic006G262800 Sobic006G262800 Sobic005G078700--Sobic006G262800 Sobic004G282500 Sobic004G282500 Sobic005G078700--Sobic004G282500 Sobic009G154900 Sobic009G154900 Sobic005G078700--Sobic009G154900 Sobic009G105400 Sobic009G105400 Sobic005G078700--Sobic009G105400 Sobic006G091000 Sobic006G091000 Sobic007G053400--Sobic006G091000 Sobic001G343000 Sobic001G343000 Sobic007G053400--Sobic001G343000 Sobic003G211700 Sobic003G211700 Sobic007G053400--Sobic003G211700 Sobic004G353400 Sobic004G353400 Sobic007G053400--Sobic004G353400 Sobic010G074900 Sobic010G074900 Sobic007G053400--Sobic010G074900 Sobic010G172400 Sobic010G172400 Sobic007G053400--Sobic010G172400 Sobic007G139400 Sobic007G139400 Sobic007G053400--Sobic007G139400 Sobic007G201000 Sobic007G201000 Sobic007G053400--Sobic007G201000 Sobic009G040800 Sobic009G040800 Sobic007G053400--Sobic009G040800 Sobic003G173400--Sobic002G362200 Sobic002G426100 Sobic002G426100 Sobic003G173400--Sobic002G426100 Sobic008G111600 Sobic008G111600 Sobic003G173400--Sobic008G111600 Sobic007G047600 Sobic007G047600 Sobic003G173400--Sobic007G047600 Sobic006G181800 Sobic006G181800 Sobic003G173400--Sobic006G181800 Sobic009G049200 Sobic009G049200 Sobic003G173400--Sobic009G049200 Sobic001G533100 Sobic001G533100 Sobic003G173400--Sobic001G533100 Sobic003G173400--Sobic001G140700 Sobic004G001600 Sobic004G001600 Sobic003G173400--Sobic004G001600 Sobic002G362200--Sobic008G111600 Sobic010G252700 Sobic010G252700 Sobic002G362200--Sobic010G252700 Sobic008G090000 Sobic008G090000 Sobic002G362200--Sobic008G090000 Sobic008G179000 Sobic008G179000 Sobic002G362200--Sobic008G179000 Sobic002G362200--Sobic002G426100 Sobic001G537400 Sobic001G537400 Sobic002G362200--Sobic001G537400 Sobic002G362200--Sobic001G268300 Sobic008G031200 Sobic008G031200 Sobic002G362200--Sobic008G031200 Sobic003G147500 Sobic003G147500 Sobic002G362200--Sobic003G147500 Sobic001G487200 Sobic001G487200 Sobic009G212100--Sobic001G487200 Sobic004G315700 Sobic004G315700 Sobic009G212100--Sobic004G315700 Sobic001G296800 Sobic001G296800 Sobic009G212100--Sobic001G296800 Sobic003G226700 Sobic003G226700 Sobic009G212100--Sobic003G226700 Sobic007G084200 Sobic007G084200 Sobic009G212100--Sobic007G084200 Sobic006G267500 Sobic006G267500 Sobic009G212100--Sobic006G267500 Sobic006G084300 Sobic006G084300 Sobic009G212100--Sobic006G084300 Sobic001G369800 Sobic001G369800 Sobic009G212100--Sobic001G369800 Sobic006G254500 Sobic006G254500 Sobic009G212100--Sobic006G254500 Sobic006G272500 Sobic006G272500 Sobic002G293700--Sobic006G272500 Sobic009G124800 Sobic009G124800 Sobic002G293700--Sobic009G124800 Sobic006G257200 Sobic006G257200 Sobic002G293700--Sobic006G257200 Sobic006G241800 Sobic006G241800 Sobic002G293700--Sobic006G241800 Sobic002G071850 Sobic002G071850 Sobic002G293700--Sobic002G071850 Sobic001G285200 Sobic001G285200 Sobic002G293700--Sobic001G285200 Sobic002G370400 Sobic002G370400 Sobic002G293700--Sobic002G370400 Sobic008G169400 Sobic008G169400 Sobic002G293700--Sobic008G169400 Sobic003G031700 Sobic003G031700 Sobic002G293700--Sobic003G031700 Sobic006G046600 Sobic006G046600 Sobic001G494100--Sobic006G046600 Sobic001G494100--Sobic008G169400 Sobic005G204100 Sobic005G204100 Sobic001G494100--Sobic005G204100 Sobic004G227500 Sobic004G227500 Sobic001G494100--Sobic004G227500 Sobic003G277900 Sobic003G277900 Sobic001G494100--Sobic003G277900 Sobic006G262100 Sobic006G262100 Sobic001G494100--Sobic006G262100 Sobic002G216600 Sobic002G216600 Sobic001G494100--Sobic002G216600 Sobic004G199700 Sobic004G199700 Sobic001G494100--Sobic004G199700 Sobic001G315400 Sobic001G315400 Sobic001G494100--Sobic001G315400 Sobic007G125300 Sobic007G125300 Sobic001G140700--Sobic007G125300 Sobic004G069400 Sobic004G069400 Sobic001G140700--Sobic004G069400 Sobic006G094100 Sobic006G094100 Sobic001G140700--Sobic006G094100 Sobic002G236700 Sobic002G236700 Sobic001G140700--Sobic002G236700 Sobic003G212600 Sobic003G212600 Sobic001G140700--Sobic003G212600 Sobic001G140700--Sobic001G268300 Sobic006G120600 Sobic006G120600 Sobic001G140700--Sobic006G120600 Sobic009G087300 Sobic009G087300 Sobic001G140700--Sobic009G087300 Sobic010G250400 Sobic010G250400 Sobic001G140700--Sobic010G250400 Sobic004G225700 Sobic004G225700 Sobic008G086200--Sobic004G225700 Sobic009G175200 Sobic009G175200 Sobic008G086200--Sobic009G175200 Sobic003G174900 Sobic003G174900 Sobic008G086200--Sobic003G174900 Sobic003G375000 Sobic003G375000 Sobic008G086200--Sobic003G375000 Sobic009G123500 Sobic009G123500 Sobic008G086200--Sobic009G123500 Sobic008G190500 Sobic008G190500 Sobic008G086200--Sobic008G190500 Sobic004G289500 Sobic004G289500 Sobic008G086200--Sobic004G289500 Sobic009G164900 Sobic009G164900 Sobic008G086200--Sobic009G164900 Sobic010G118700 Sobic010G118700 Sobic008G086200--Sobic010G118700
Octagon: transcription factors


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