Gene annotation
Transcriptome id Sobic.007G101100.2
Synonym
Functional annotation -
UniProt A0A1Z5R913
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G088400 OsFBX135 - F-box domain containing protein, expressed -
2 Sobic.005G078700 OsFBX411 - F-box domain containing protein, expressed -
3 Sobic.004G282500 PPR repeat domain containing protein, putative, expressed -
4 Sobic.010G098600 heat shock protein DnaJ, putative, expressed -
5 Sobic.003G325900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat, putative, expressed -
6 Sobic.003G184666 - -
7 Sobic.010G175000 expressed protein -
8 Sobic.008G123200 AAA-type ATPase family protein, putative, expressed -
9 Sobic.004G038850 - -
10 Sobic.005G075800 rp3 protein, putative, expressed -
11 Sobic.002G251800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
12 Sobic.002G362200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MSH-like DNA mismatch repair protein, putative, expressed K08735: DNA mismatch repair protein MSH2
13 Sobic.010G143600 ATP-binding region, ATPase-like domain containing protein, expressed -
14 Sobic.006G088820 - -
15 Sobic.003G002700 WD domain, G-beta repeat domain containing protein, expressed K11806: DCAF13, DDB1- and CUL4-associated factor 13
16 Sobic.008G031200 pentatricopeptide, putative, expressed -
17 Sobic.004G240000 phosphoenolpyruvate carboxylase kinase, putative, expressed -
18 Sobic.010G257000 two-component response regulator, putative, expressed -
19 Sobic.001G268300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@queuine tRNA-ribosyltransferase, putative, expressed K15407: queuine tRNA-ribosyltransferase subunit QTRTD1
20 Sobic.001G122200 zinc finger protein, putative, expressed K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD


Gene co-expression network
sample Sobic007G101100 Sobic007G101100 Sobic006G088400 Sobic006G088400 Sobic007G101100--Sobic006G088400 Sobic005G078700 Sobic005G078700 Sobic007G101100--Sobic005G078700 Sobic004G282500 Sobic004G282500 Sobic007G101100--Sobic004G282500 Sobic010G098600 Sobic010G098600 Sobic007G101100--Sobic010G098600 Sobic003G325900 Sobic003G325900 Sobic007G101100--Sobic003G325900 Sobic003G184666 Sobic003G184666 Sobic007G101100--Sobic003G184666 Sobic010G175000 Sobic010G175000 Sobic007G101100--Sobic010G175000 Sobic008G123200 Sobic008G123200 Sobic007G101100--Sobic008G123200 Sobic004G038850 Sobic004G038850 Sobic007G101100--Sobic004G038850 Sobic003G002700 Sobic003G002700 Sobic006G088400--Sobic003G002700 Sobic002G416150 Sobic002G416150 Sobic006G088400--Sobic002G416150 Sobic002G429700 Sobic002G429700 Sobic006G088400--Sobic002G429700 Sobic009G053101 Sobic009G053101 Sobic006G088400--Sobic009G053101 Sobic003G075400 Sobic003G075400 Sobic006G088400--Sobic003G075400 Sobic006G088400--Sobic007G101100 Sobic010G257000 Sobic010G257000 Sobic006G088400--Sobic010G257000 Sobic006G088400--Sobic010G175000 Sobic006G088400--Sobic005G078700 Sobic005G078700--Sobic003G325900 Sobic010G143600 Sobic010G143600 Sobic005G078700--Sobic010G143600 Sobic005G078700--Sobic003G184666 Sobic001G268300 Sobic001G268300 Sobic005G078700--Sobic001G268300 Sobic002G362200 Sobic002G362200 Sobic005G078700--Sobic002G362200 Sobic006G262800 Sobic006G262800 Sobic005G078700--Sobic006G262800 Sobic005G078700--Sobic004G282500 Sobic009G154900 Sobic009G154900 Sobic005G078700--Sobic009G154900 Sobic009G105400 Sobic009G105400 Sobic005G078700--Sobic009G105400 Sobic004G282500--Sobic001G268300 Sobic004G282500--Sobic006G262800 Sobic004G282500--Sobic003G325900 Sobic004G282500--Sobic005G078700 Sobic001G122200 Sobic001G122200 Sobic004G282500--Sobic001G122200 Sobic004G282500--Sobic009G154900 Sobic001G203600 Sobic001G203600 Sobic004G282500--Sobic001G203600 Sobic008G031200 Sobic008G031200 Sobic004G282500--Sobic008G031200 Sobic003G412000 Sobic003G412000 Sobic004G282500--Sobic003G412000 Sobic010G098600--Sobic005G078700 Sobic007G053400 Sobic007G053400 Sobic010G098600--Sobic007G053400 Sobic003G173400 Sobic003G173400 Sobic010G098600--Sobic003G173400 Sobic010G098600--Sobic002G362200 Sobic009G212100 Sobic009G212100 Sobic010G098600--Sobic009G212100 Sobic002G293700 Sobic002G293700 Sobic010G098600--Sobic002G293700 Sobic001G494100 Sobic001G494100 Sobic010G098600--Sobic001G494100 Sobic001G140700 Sobic001G140700 Sobic010G098600--Sobic001G140700 Sobic008G086200 Sobic008G086200 Sobic010G098600--Sobic008G086200 Sobic003G325900--Sobic005G078700 Sobic003G325900--Sobic004G282500 Sobic003G325900--Sobic003G184666 Sobic003G325900--Sobic001G268300 Sobic003G325900--Sobic002G362200 Sobic003G045450 Sobic003G045450 Sobic003G325900--Sobic003G045450 Sobic003G325900--Sobic008G123200 Sobic006G088820 Sobic006G088820 Sobic003G325900--Sobic006G088820 Sobic003G325900--Sobic003G412000 Sobic010G252200 Sobic010G252200 Sobic003G184666--Sobic010G252200 Sobic003G184666--Sobic005G078700 Sobic003G184666--Sobic010G143600 Sobic003G183466 Sobic003G183466 Sobic003G184666--Sobic003G183466 Sobic006G126800 Sobic006G126800 Sobic003G184666--Sobic006G126800 Sobic003G184666--Sobic003G325900 Sobic003G184666--Sobic003G045450 Sobic003G184666--Sobic002G362200 Sobic004G222150 Sobic004G222150 Sobic003G184666--Sobic004G222150 Sobic004G192500 Sobic004G192500 Sobic010G175000--Sobic004G192500 Sobic010G175000--Sobic010G257000 Sobic006G226000 Sobic006G226000 Sobic010G175000--Sobic006G226000 Sobic009G188900 Sobic009G188900 Sobic010G175000--Sobic009G188900 Sobic006G281900 Sobic006G281900 Sobic010G175000--Sobic006G281900 Sobic006G275500 Sobic006G275500 Sobic010G175000--Sobic006G275500 Sobic006G016700 Sobic006G016700 Sobic010G175000--Sobic006G016700 Sobic002G168000 Sobic002G168000 Sobic010G175000--Sobic002G168000 Sobic002G055800 Sobic002G055800 Sobic010G175000--Sobic002G055800 Sobic005G138000 Sobic005G138000 Sobic008G123200--Sobic005G138000 Sobic009G224300 Sobic009G224300 Sobic008G123200--Sobic009G224300 Sobic003G336500 Sobic003G336500 Sobic008G123200--Sobic003G336500 Sobic001G448000 Sobic001G448000 Sobic008G123200--Sobic001G448000 Sobic008G123200--Sobic010G175000 Sobic007G038700 Sobic007G038700 Sobic008G123200--Sobic007G038700 Sobic004G123200 Sobic004G123200 Sobic008G123200--Sobic004G123200 Sobic008G123200--Sobic009G105400 Sobic008G165266 Sobic008G165266 Sobic008G123200--Sobic008G165266 Sobic002G273500 Sobic002G273500 Sobic004G038850--Sobic002G273500 Sobic004G038850--Sobic003G184666 Sobic004G038850--Sobic010G252200 Sobic010G211200 Sobic010G211200 Sobic004G038850--Sobic010G211200 Sobic009G012300 Sobic009G012300 Sobic004G038850--Sobic009G012300 Sobic004G038850--Sobic004G222150 Sobic004G038850--Sobic003G045450 Sobic004G222200 Sobic004G222200 Sobic004G038850--Sobic004G222200 Sobic004G038850--Sobic002G055800
Octagon: transcription factors


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