Gene annotation
Transcriptome id Sobic.005G075800.1
Synonym Sb05g006190
Functional annotation rp3 protein, putative, expressed
UniProt C5Y740
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF455
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14470 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os05g23990.1 : rp3 protein, putative, expressed
MaizeGDB (Corn) Zm00025a035225
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G184666 - -
2 Sobic.010G068900 glutamate receptor 2.6 precursor, putative, expressed K05387: glutamate receptor, ionotropic, plant
3 Sobic.003G325900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat, putative, expressed -
4 Sobic.004G282500 PPR repeat domain containing protein, putative, expressed -
5 Sobic.009G014000 expressed protein -
6 Sobic.001G268300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@queuine tRNA-ribosyltransferase, putative, expressed K15407: queuine tRNA-ribosyltransferase subunit QTRTD1
7 Sobic.006G106300 - K17675: SUPV3L1, ATP-dependent RNA helicase SUPV3L1/SUV3
8 Sobic.004G030600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.002G290100 expressed protein K08739: DNA mismatch repair protein MLH3
10 Sobic.009G154900 tubulin/FtsZ domain containing protein, putative, expressed K03531: cell division protein FtsZ
11 Sobic.003G230600 transcription factor X1, putative, expressed -
12 Sobic.005G078700 OsFBX411 - F-box domain containing protein, expressed -
13 Sobic.006G085900 pentatricopeptide, putative, expressed -
14 Sobic.002G011100 expressed protein -
15 Sobic.008G095900 ATP binding protein, putative, expressed K17592: sacsin
16 Sobic.006G237500 PPR repeat domain containing protein, putative, expressed -
17 Sobic.004G215600 - K15271: HFM1, ATP-dependent DNA helicase HFM1/MER3
18 Sobic.010G087400 growth regulator related protein, putative, expressed -
19 Sobic.003G435400 OsDegp14 - Putative Deg protease homologue, expressed -
20 Sobic.004G031300 PPR repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic005G075800 Sobic005G075800 Sobic003G184666 Sobic003G184666 Sobic005G075800--Sobic003G184666 Sobic010G068900 Sobic010G068900 Sobic005G075800--Sobic010G068900 Sobic003G325900 Sobic003G325900 Sobic005G075800--Sobic003G325900 Sobic004G282500 Sobic004G282500 Sobic005G075800--Sobic004G282500 Sobic009G014000 Sobic009G014000 Sobic005G075800--Sobic009G014000 Sobic001G268300 Sobic001G268300 Sobic005G075800--Sobic001G268300 Sobic006G106300 Sobic006G106300 Sobic005G075800--Sobic006G106300 Sobic004G030600 Sobic004G030600 Sobic005G075800--Sobic004G030600 Sobic002G290100 Sobic002G290100 Sobic005G075800--Sobic002G290100 Sobic010G252200 Sobic010G252200 Sobic003G184666--Sobic010G252200 Sobic005G078700 Sobic005G078700 Sobic003G184666--Sobic005G078700 Sobic010G143600 Sobic010G143600 Sobic003G184666--Sobic010G143600 Sobic003G183466 Sobic003G183466 Sobic003G184666--Sobic003G183466 Sobic006G126800 Sobic006G126800 Sobic003G184666--Sobic006G126800 Sobic003G184666--Sobic003G325900 Sobic003G045450 Sobic003G045450 Sobic003G184666--Sobic003G045450 Sobic002G362200 Sobic002G362200 Sobic003G184666--Sobic002G362200 Sobic004G222150 Sobic004G222150 Sobic003G184666--Sobic004G222150 Sobic002G172500 Sobic002G172500 Sobic010G068900--Sobic002G172500 Sobic004G256900 Sobic004G256900 Sobic010G068900--Sobic004G256900 Sobic006G262800 Sobic006G262800 Sobic010G068900--Sobic006G262800 Sobic010G190900 Sobic010G190900 Sobic010G068900--Sobic010G190900 Sobic004G241000 Sobic004G241000 Sobic010G068900--Sobic004G241000 Sobic006G069100 Sobic006G069100 Sobic010G068900--Sobic006G069100 Sobic006G085900 Sobic006G085900 Sobic010G068900--Sobic006G085900 Sobic003G184300 Sobic003G184300 Sobic010G068900--Sobic003G184300 Sobic001G478900 Sobic001G478900 Sobic010G068900--Sobic001G478900 Sobic003G325900--Sobic005G078700 Sobic003G325900--Sobic004G282500 Sobic003G325900--Sobic003G184666 Sobic003G325900--Sobic001G268300 Sobic003G325900--Sobic002G362200 Sobic003G325900--Sobic003G045450 Sobic008G123200 Sobic008G123200 Sobic003G325900--Sobic008G123200 Sobic006G088820 Sobic006G088820 Sobic003G325900--Sobic006G088820 Sobic003G412000 Sobic003G412000 Sobic003G325900--Sobic003G412000 Sobic004G282500--Sobic001G268300 Sobic004G282500--Sobic006G262800 Sobic004G282500--Sobic003G325900 Sobic004G282500--Sobic005G078700 Sobic001G122200 Sobic001G122200 Sobic004G282500--Sobic001G122200 Sobic009G154900 Sobic009G154900 Sobic004G282500--Sobic009G154900 Sobic001G203600 Sobic001G203600 Sobic004G282500--Sobic001G203600 Sobic008G031200 Sobic008G031200 Sobic004G282500--Sobic008G031200 Sobic004G282500--Sobic003G412000 Sobic007G186400 Sobic007G186400 Sobic009G014000--Sobic007G186400 Sobic004G215600 Sobic004G215600 Sobic009G014000--Sobic004G215600 Sobic006G106600 Sobic006G106600 Sobic009G014000--Sobic006G106600 Sobic004G000400 Sobic004G000400 Sobic009G014000--Sobic004G000400 Sobic002G066800 Sobic002G066800 Sobic009G014000--Sobic002G066800 Sobic009G014000--Sobic003G183466 Sobic005G087300 Sobic005G087300 Sobic009G014000--Sobic005G087300 Sobic002G426100 Sobic002G426100 Sobic009G014000--Sobic002G426100 Sobic001G242300 Sobic001G242300 Sobic009G014000--Sobic001G242300 Sobic009G041800 Sobic009G041800 Sobic001G268300--Sobic009G041800 Sobic008G179000 Sobic008G179000 Sobic001G268300--Sobic008G179000 Sobic001G268300--Sobic006G262800 Sobic001G268300--Sobic002G362200 Sobic001G268300--Sobic008G031200 Sobic003G142400 Sobic003G142400 Sobic001G268300--Sobic003G142400 Sobic001G268300--Sobic010G252200 Sobic001G268300--Sobic004G282500 Sobic001G268300--Sobic005G078700 Sobic003G409900 Sobic003G409900 Sobic006G106300--Sobic003G409900 Sobic003G021600 Sobic003G021600 Sobic006G106300--Sobic003G021600 Sobic002G398700 Sobic002G398700 Sobic006G106300--Sobic002G398700 Sobic001G097900 Sobic001G097900 Sobic006G106300--Sobic001G097900 Sobic001G015400 Sobic001G015400 Sobic006G106300--Sobic001G015400 Sobic009G254100 Sobic009G254100 Sobic006G106300--Sobic009G254100 Sobic002G301100 Sobic002G301100 Sobic006G106300--Sobic002G301100 Sobic001G474400 Sobic001G474400 Sobic006G106300--Sobic001G474400 Sobic002G364900 Sobic002G364900 Sobic006G106300--Sobic002G364900 Sobic001G033600 Sobic001G033600 Sobic004G030600--Sobic001G033600 Sobic004G030600--Sobic008G031200 Sobic006G143200 Sobic006G143200 Sobic004G030600--Sobic006G143200 Sobic004G030600--Sobic002G362200 Sobic004G027700 Sobic004G027700 Sobic004G030600--Sobic004G027700 Sobic002G084400 Sobic002G084400 Sobic004G030600--Sobic002G084400 Sobic006G085800 Sobic006G085800 Sobic004G030600--Sobic006G085800 Sobic004G030600--Sobic010G068900 Sobic003G067201 Sobic003G067201 Sobic004G030600--Sobic003G067201 Sobic001G356100 Sobic001G356100 Sobic002G290100--Sobic001G356100 Sobic003G314300 Sobic003G314300 Sobic002G290100--Sobic003G314300 Sobic009G128500 Sobic009G128500 Sobic002G290100--Sobic009G128500 Sobic005G017200 Sobic005G017200 Sobic002G290100--Sobic005G017200 Sobic003G435400 Sobic003G435400 Sobic002G290100--Sobic003G435400 Sobic006G112500 Sobic006G112500 Sobic002G290100--Sobic006G112500 Sobic002G290100--Sobic005G087300 Sobic004G049200 Sobic004G049200 Sobic002G290100--Sobic004G049200 Sobic009G116900 Sobic009G116900 Sobic002G290100--Sobic009G116900
Octagon: transcription factors


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